RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 FLVCR1-AS1Q8TAF5 88 aa4.35□□□□□ -1.71
SSR3-208ENST00000496050 RAB3CQ96E17 227 aa4.35□□□□□ -1.71
SSR3-208ENST00000496050 DTNBP1Q96EV8 351 aa4.35□□□□□ -1.71
SSR3-208ENST00000496050 DNAJA3Q96EY1 480 aa4.35□□□□□ -1.71
SSR3-208ENST00000496050 VPS39Q96JC1 886 aa4.35□□□□□ -1.71
SSR3-208ENST00000496050 SOSTQ9BQB4 213 aa4.35□□□□□ -1.71
SSR3-208ENST00000496050 TRIM6Q9C030 488 aaPredicted RBP4.35□□□□□ -1.71
SSR3-208ENST00000496050 ZNF446Q9NWS9 450 aa4.35□□□□□ -1.71
SSR3-208ENST00000496050 RDH8Q9NYR8 311 aa4.35□□□□□ -1.71
SSR3-208ENST00000496050 SENP1Q9P0U3 644 aa4.35□□□□□ -1.71
SSR3-208ENST00000496050 RCOR3Q9P2K3 495 aaPredicted RBP4.35□□□□□ -1.71
SSR3-208ENST00000496050 KLK13Q9UKR3 277 aa4.35□□□□□ -1.71
SSR3-208ENST00000496050 SHISA9B4DS77 424 aa4.34□□□□□ -1.71
SSR3-208ENST00000496050 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.34□□□□□ -1.71
SSR3-208ENST00000496050 JAK2O60674 1132 aa4.34□□□□□ -1.71
SSR3-208ENST00000496050 CSF2P04141 144 aa4.34□□□□□ -1.71
SSR3-208ENST00000496050 PCCBP05166 539 aa4.34□□□□□ -1.71
SSR3-208ENST00000496050 KRT8P05787 483 aa4.34□□□□□ -1.71
SSR3-208ENST00000496050 H2AFXP16104 143 aaPredicted RBP4.34□□□□□ -1.71
SSR3-208ENST00000496050 ADSSP30520 456 aa4.34□□□□□ -1.71
SSR3-208ENST00000496050 CYLC1P35663 651 aaPredicted RBP4.34□□□□□ -1.71
SSR3-208ENST00000496050 ELP6Q0PNE2 266 aa4.34□□□□□ -1.71
SSR3-208ENST00000496050 TFDP1Q14186 410 aa4.34□□□□□ -1.71
SSR3-208ENST00000496050 CRMP1Q14194 572 aa4.34□□□□□ -1.71
SSR3-208ENST00000496050 ZIC1Q15915 447 aa4.34□□□□□ -1.71
SSR3-208ENST00000496050 C17orf58Q2M2W7 97 aa4.34□□□□□ -1.71
SSR3-208ENST00000496050 SULT1C3Q6IMI6 304 aa4.34□□□□□ -1.71
SSR3-208ENST00000496050 PNCKQ6P2M8 343 aa4.34□□□□□ -1.71
SSR3-208ENST00000496050 CBLN3Q6UW01 205 aa4.34□□□□□ -1.71
SSR3-208ENST00000496050 ADAMTSL5Q6ZMM2 481 aa4.34□□□□□ -1.71
SSR3-208ENST00000496050 LRRC70Q7Z2Q7 622 aa4.34□□□□□ -1.71
SSR3-208ENST00000496050 GMCL1P1Q8NEA9 526 aa4.34□□□□□ -1.71
SSR3-208ENST00000496050 C17orf47Q8NEP4 570 aa4.34□□□□□ -1.71
SSR3-208ENST00000496050 OR4Q3Q8NH05 313 aa4.34□□□□□ -1.71
SSR3-208ENST00000496050 TBCKQ8TEA7 893 aa4.34□□□□□ -1.71
SSR3-208ENST00000496050 CRYGNQ8WXF5 182 aa4.34□□□□□ -1.71
SSR3-208ENST00000496050 TOMM40LQ969M1 308 aa4.34□□□□□ -1.71
SSR3-208ENST00000496050 ADIPOR1Q96A54 375 aa4.34□□□□□ -1.71
SSR3-208ENST00000496050 C9orf85Q96MD7 179 aa4.34□□□□□ -1.71
SSR3-208ENST00000496050 NFKBIZQ9BYH8 718 aa4.34□□□□□ -1.71
SSR3-208ENST00000496050 COMMD4Q9H0A8 199 aa4.34□□□□□ -1.71
SSR3-208ENST00000496050 GNB4Q9HAV0 340 aa4.34□□□□□ -1.71
SSR3-208ENST00000496050 AGPAT5Q9NUQ2 364 aa4.34□□□□□ -1.71
SSR3-208ENST00000496050 TMCC3Q9ULS5 477 aa4.34□□□□□ -1.71
SSR3-208ENST00000496050 EXOSC1Q9Y3B2 195 aaKnown RBP4.34□□□□□ -1.71
SSR3-208ENST00000496050 RNF115Q9Y4L5 304 aa4.34□□□□□ -1.71
SSR3-208ENST00000496050 IGHV3OR16-12A0A075B7B8 117 aa4.33□□□□□ -1.72
SSR3-208ENST00000496050 ACOD1A6NK06 481 aa4.33□□□□□ -1.72
SSR3-208ENST00000496050 KRTAP16-1A8MUX0 517 aa4.33□□□□□ -1.72
SSR3-208ENST00000496050 ZNF487B1APH4 448 aa4.33□□□□□ -1.72
SSR3-208ENST00000496050 SDHDO14521 159 aa4.33□□□□□ -1.72
SSR3-208ENST00000496050 SH3BGRLO75368 114 aa4.33□□□□□ -1.72
SSR3-208ENST00000496050 MBD3O95983 291 aa4.33□□□□□ -1.72
SSR3-208ENST00000496050 ASNSP08243 561 aa4.33□□□□□ -1.72
SSR3-208ENST00000496050 HOXD4P09016 255 aaPredicted RBP4.33□□□□□ -1.72
SSR3-208ENST00000496050 EPB41P11171 864 aaKnown RBP4.33□□□□□ -1.72
SSR3-208ENST00000496050 PVRP15151 417 aa4.33□□□□□ -1.72
SSR3-208ENST00000496050 PSMA2P25787 234 aa4.33□□□□□ -1.72
SSR3-208ENST00000496050 ELK3P41970 407 aa4.33□□□□□ -1.72
SSR3-208ENST00000496050 UBE2V2Q15819 145 aa4.33□□□□□ -1.72
SSR3-208ENST00000496050 MS4A13Q5J8X5 152 aa4.33□□□□□ -1.72
SSR3-208ENST00000496050 NHLRC3Q5JS37 347 aa4.33□□□□□ -1.72
SSR3-208ENST00000496050 NCR3LG1Q68D85 454 aa4.33□□□□□ -1.72
SSR3-208ENST00000496050 ZNF772Q68DY9 489 aaPredicted RBP4.33□□□□□ -1.72
SSR3-208ENST00000496050 LEMD1Q68G75 181 aa4.33□□□□□ -1.72
SSR3-208ENST00000496050 ASPHD2Q6ICH7 369 aa4.33□□□□□ -1.72
SSR3-208ENST00000496050 SLC25A24Q6NUK1 477 aa4.33□□□□□ -1.72
SSR3-208ENST00000496050 HACD2Q6Y1H2 254 aa4.33□□□□□ -1.72
SSR3-208ENST00000496050 TMEM184AQ6ZMB5 413 aa4.33□□□□□ -1.72
SSR3-208ENST00000496050 SLC25A42Q86VD7 318 aa4.33□□□□□ -1.72
SSR3-208ENST00000496050 SUMF1Q8NBK3 374 aa4.33□□□□□ -1.72
SSR3-208ENST00000496050 TFB1MQ8WVM0 346 aaKnown RBP4.33□□□□□ -1.72
SSR3-208ENST00000496050 TESK2Q96S53 571 aa4.33□□□□□ -1.72
SSR3-208ENST00000496050 TBC1D10AQ9BXI6 508 aa4.33□□□□□ -1.72
SSR3-208ENST00000496050 GSDMCQ9BYG8 508 aa4.33□□□□□ -1.72
SSR3-208ENST00000496050 AATFQ9NY61 560 aaKnown RBP eCLIP4.33□□□□□ -1.72
SSR3-208ENST00000496050 BARX2Q9UMQ3 279 aaPredicted RBP4.33□□□□□ -1.72
SSR3-208ENST00000496050 STYXL1Q9Y6J8 313 aa4.33□□□□□ -1.72
SSR3-208ENST00000496050 LRRC30A6NM36 301 aa4.32□□□□□ -1.72
SSR3-208ENST00000496050 LRRTM2O43300 516 aa4.32□□□□□ -1.72
SSR3-208ENST00000496050 PPIHO43447 177 aaKnown RBP4.32□□□□□ -1.72
SSR3-208ENST00000496050 LCMT2O60294 686 aaKnown RBP4.32□□□□□ -1.72
SSR3-208ENST00000496050 PRAMEF12O95522 483 aa4.32□□□□□ -1.72
SSR3-208ENST00000496050 RENP00797 406 aa4.32□□□□□ -1.72
SSR3-208ENST00000496050 CGAP01215 116 aa4.32□□□□□ -1.72
SSR3-208ENST00000496050 IGHV3-9P01782 118 aa4.32□□□□□ -1.72
SSR3-208ENST00000496050 MELTFP08582 738 aa4.32□□□□□ -1.72
SSR3-208ENST00000496050 SHC1P29353 583 aa4.32□□□□□ -1.72
SSR3-208ENST00000496050 DLSTP36957 453 aa4.32□□□□□ -1.72
SSR3-208ENST00000496050 RPS6P62753 249 aaKnown RBP4.32□□□□□ -1.72
SSR3-208ENST00000496050 ZNF33BQ06732 778 aa4.32□□□□□ -1.72
SSR3-208ENST00000496050 TATDN3Q17R31 274 aa4.32□□□□□ -1.72
SSR3-208ENST00000496050 MICAQ29983 383 aa4.32□□□□□ -1.72
SSR3-208ENST00000496050 DCST2Q5T1A1 773 aa4.32□□□□□ -1.72
SSR3-208ENST00000496050 SEL1L2Q5TEA6 688 aa4.32□□□□□ -1.72
SSR3-208ENST00000496050 SLX4IPQ5VYV7 408 aa4.32□□□□□ -1.72
SSR3-208ENST00000496050 SCYL2Q6P3W7 929 aa4.32□□□□□ -1.72
SSR3-208ENST00000496050 ARMCX2Q7L311 632 aa4.32□□□□□ -1.72
SSR3-208ENST00000496050 SLC47A2Q86VL8 602 aa4.32□□□□□ -1.72
SSR3-208ENST00000496050 HIPK1Q86Z02 1210 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms