RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 ACER3Q9NUN7 267 aa15.2■□□□□ 0.02
CBX4-204ENST00000495122 TMCC3Q9ULS5 477 aa15.2■□□□□ 0.02
CBX4-204ENST00000495122 C19orf53Q9UNZ5 99 aaPredicted RBP15.2■□□□□ 0.02
CBX4-204ENST00000495122 PLCL2Q9UPR0 1127 aa15.2■□□□□ 0.02
CBX4-204ENST00000495122 MRPS33Q9Y291 106 aaKnown RBP15.2■□□□□ 0.02
CBX4-204ENST00000495122 SH3GLB1Q9Y371 365 aa15.2■□□□□ 0.02
CBX4-204ENST00000495122 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.19■□□□□ 0.02
CBX4-204ENST00000495122 CCDC187A0A096LP49 1063 aa15.19■□□□□ 0.02
CBX4-204ENST00000495122 PRAMEF25A6NGN4 478 aa15.19■□□□□ 0.02
CBX4-204ENST00000495122 CDRT15L2A8MXV6 281 aa15.19■□□□□ 0.02
CBX4-204ENST00000495122 FAAHO00519 579 aa15.19■□□□□ 0.02
CBX4-204ENST00000495122 CYR61O00622 381 aa15.19■□□□□ 0.02
CBX4-204ENST00000495122 ABCB7O75027 752 aa15.19■□□□□ 0.02
CBX4-204ENST00000495122 CPNE6O95741 557 aa15.19■□□□□ 0.02
CBX4-204ENST00000495122 ADAP00813 363 aa15.19■□□□□ 0.02
CBX4-204ENST00000495122 PVRP15151 417 aa15.19■□□□□ 0.02
CBX4-204ENST00000495122 ST6GAL1P15907 406 aa15.19■□□□□ 0.02
CBX4-204ENST00000495122 MAZP56270 477 aaKnown RBP15.19■□□□□ 0.02
CBX4-204ENST00000495122 VSX2P58304 361 aaPredicted RBP15.19■□□□□ 0.02
CBX4-204ENST00000495122 HPCAP84074 193 aa15.19■□□□□ 0.02
CBX4-204ENST00000495122 DUSP2Q05923 314 aa15.19■□□□□ 0.02
CBX4-204ENST00000495122 SYPL1Q16563 259 aa15.19■□□□□ 0.02
CBX4-204ENST00000495122 DUSP7Q16829 419 aa15.19■□□□□ 0.02
CBX4-204ENST00000495122 CNPY1Q3B7I2 92 aa15.19■□□□□ 0.02
CBX4-204ENST00000495122 EXOSC6Q5RKV6 272 aaKnown RBP15.19■□□□□ 0.02
CBX4-204ENST00000495122 MFSD12Q6NUT3 480 aa15.19■□□□□ 0.02
CBX4-204ENST00000495122 DHRS4L2Q6PKH6 230 aa15.19■□□□□ 0.02
CBX4-204ENST00000495122 GPR141Q7Z602 305 aa15.19■□□□□ 0.02
CBX4-204ENST00000495122 MCATQ8IVS2 390 aaKnown RBP15.19■□□□□ 0.02
CBX4-204ENST00000495122 CA13Q8N1Q1 262 aa15.19■□□□□ 0.02
CBX4-204ENST00000495122 DEPDC4Q8N2C3 294 aa15.19■□□□□ 0.02
CBX4-204ENST00000495122 ARHGEF39Q8N4T4 335 aa15.19■□□□□ 0.02
CBX4-204ENST00000495122 SMYD1Q8NB12 490 aa15.19■□□□□ 0.02
CBX4-204ENST00000495122 GPR32P1Q8NGA4 272 aa15.19■□□□□ 0.02
CBX4-204ENST00000495122 OR6C4Q8NGE1 309 aa15.19■□□□□ 0.02
CBX4-204ENST00000495122 WDR36Q8NI36 951 aaKnown RBP15.19■□□□□ 0.02
CBX4-204ENST00000495122 ZNF420Q8TAQ5 688 aaPredicted RBP15.19■□□□□ 0.02
CBX4-204ENST00000495122 ADAMTS15Q8TE58 950 aa15.19■□□□□ 0.02
CBX4-204ENST00000495122 GIMAP5Q96F15 307 aa15.19■□□□□ 0.02
CBX4-204ENST00000495122 ZDHHC12Q96GR4 267 aa15.19■□□□□ 0.02
CBX4-204ENST00000495122 LIN37Q96GY3 246 aaPredicted RBP15.19■□□□□ 0.02
CBX4-204ENST00000495122 POLE3Q9NRF9 147 aa15.19■□□□□ 0.02
CBX4-204ENST00000495122 PTTG2Q9NZH5 202 aa15.19■□□□□ 0.02
CBX4-204ENST00000495122 MGAT4BQ9UQ53 548 aa15.19■□□□□ 0.02
CBX4-204ENST00000495122 IFT52Q9Y366 437 aa15.19■□□□□ 0.02
CBX4-204ENST00000495122 TPRKBQ9Y3C4 175 aa15.19■□□□□ 0.02
CBX4-204ENST00000495122 NAALAD2Q9Y3Q0 740 aa15.19■□□□□ 0.02
CBX4-204ENST00000495122 COL6A6A6NMZ7 2263 aa15.19■□□□□ 0.02
CBX4-204ENST00000495122 MYOCOSA0A1B0GUC4 107 aa15.18■□□□□ 0.02
CBX4-204ENST00000495122 A0A1W2PQM1 296 aa15.18■□□□□ 0.02
CBX4-204ENST00000495122 TTC36A6NLP5 189 aa15.18■□□□□ 0.02
CBX4-204ENST00000495122 D6RAR5 112 aa15.18■□□□□ 0.02
CBX4-204ENST00000495122 LGI1O95970 557 aa15.18■□□□□ 0.02
CBX4-204ENST00000495122 RECKO95980 971 aa15.18■□□□□ 0.02
CBX4-204ENST00000495122 EIF2S1P05198 315 aaKnown RBP15.18■□□□□ 0.02
CBX4-204ENST00000495122 C8orf89P0DMQ9 161 aa15.18■□□□□ 0.02
CBX4-204ENST00000495122 RNH1P13489 461 aaKnown RBP15.18■□□□□ 0.02
CBX4-204ENST00000495122 NELFEP18615 380 aaKnown RBP15.18■□□□□ 0.02
CBX4-204ENST00000495122 CBLP22681 906 aa15.18■□□□□ 0.02
CBX4-204ENST00000495122 PRKAR1BP31321 381 aa15.18■□□□□ 0.02
CBX4-204ENST00000495122 MLLT3P42568 568 aaPredicted RBP15.18■□□□□ 0.02
CBX4-204ENST00000495122 OR1E2P47887 323 aa15.18■□□□□ 0.02
CBX4-204ENST00000495122 PRKAG1P54619 331 aa15.18■□□□□ 0.02
CBX4-204ENST00000495122 CCL7P80098 99 aa15.18■□□□□ 0.02
CBX4-204ENST00000495122 PPP1R8Q12972 351 aaKnown RBP15.18■□□□□ 0.02
CBX4-204ENST00000495122 EXOC3L2Q2M3D2 409 aa15.18■□□□□ 0.02
CBX4-204ENST00000495122 ZNF628Q5EBL2 1059 aa15.18■□□□□ 0.02
CBX4-204ENST00000495122 RPS26P11Q5JNZ5 115 aaPredicted RBP15.18■□□□□ 0.02
CBX4-204ENST00000495122 AP1ARQ63HQ0 302 aa15.18■□□□□ 0.02
CBX4-204ENST00000495122 C16orf62Q7Z3J2 963 aa15.18■□□□□ 0.02
CBX4-204ENST00000495122 B3GNT8Q7Z7M8 397 aa15.18■□□□□ 0.02
CBX4-204ENST00000495122 SFTPA2Q8IWL1 248 aa15.18■□□□□ 0.02
CBX4-204ENST00000495122 TOR1AIP2Q8NFQ8 470 aa15.18■□□□□ 0.02
CBX4-204ENST00000495122 KCNE4Q8WWG9 221 aa15.18■□□□□ 0.02
CBX4-204ENST00000495122 IPCEF1Q8WWN9 437 aaPredicted RBP15.18■□□□□ 0.02
CBX4-204ENST00000495122 SLC46A1Q96NT5 459 aa15.18■□□□□ 0.02
CBX4-204ENST00000495122 STACQ99469 402 aa15.18■□□□□ 0.02
CBX4-204ENST00000495122 FEVQ99581 238 aa15.18■□□□□ 0.02
CBX4-204ENST00000495122 BARD1Q99728 777 aaKnown RBP15.18■□□□□ 0.02
CBX4-204ENST00000495122 POLR2J2Q9GZM3 115 aaKnown RBP15.18■□□□□ 0.02
CBX4-204ENST00000495122 YIPF3Q9GZM5 350 aa15.18■□□□□ 0.02
CBX4-204ENST00000495122 POLR2J3Q9H1A7 115 aaKnown RBP15.18■□□□□ 0.02
CBX4-204ENST00000495122 ANKRD19PQ9H560 264 aa15.18■□□□□ 0.02
CBX4-204ENST00000495122 DUSP22Q9NRW4 184 aa15.18■□□□□ 0.02
CBX4-204ENST00000495122 KLHL28Q9NXS3 571 aa15.18■□□□□ 0.02
CBX4-204ENST00000495122 SCN3BQ9NY72 215 aa15.18■□□□□ 0.02
CBX4-204ENST00000495122 AHCTF1Q8WYP5 2266 aa15.18■□□□□ 0.02
CBX4-204ENST00000495122 A0A1W2PRQ8 180 aa15.17■□□□□ 0.02
CBX4-204ENST00000495122 HYKKA2RU49 373 aa15.17■□□□□ 0.02
CBX4-204ENST00000495122 PRAMEF27A3QJZ7 478 aa15.17■□□□□ 0.02
CBX4-204ENST00000495122 SLC1A7O00341 560 aa15.17■□□□□ 0.02
CBX4-204ENST00000495122 ATXN7O15265 892 aaPredicted RBP15.17■□□□□ 0.02
CBX4-204ENST00000495122 AHCYL1O43865 530 aa15.17■□□□□ 0.02
CBX4-204ENST00000495122 KIF1CO43896 1103 aaKnown RBP15.17■□□□□ 0.02
CBX4-204ENST00000495122 MPZL2O60487 215 aa15.17■□□□□ 0.02
CBX4-204ENST00000495122 MITFO75030 526 aaPredicted RBP15.17■□□□□ 0.02
CBX4-204ENST00000495122 COQ9O75208 318 aa15.17■□□□□ 0.02
CBX4-204ENST00000495122 NSA2O95478 260 aaKnown RBP15.17■□□□□ 0.02
CBX4-204ENST00000495122 ALPPP05187 535 aa15.17■□□□□ 0.02
CBX4-204ENST00000495122 RPLP0P05388 317 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms