RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 CCT3P49368 545 aaKnown RBP14.6□□□□□ -0.07
LIME1-209ENST00000494776 PRIM2P49643 509 aa14.6□□□□□ -0.07
LIME1-209ENST00000494776 CLNS1AP54105 237 aaKnown RBP14.6□□□□□ -0.07
LIME1-209ENST00000494776 PNLIPRP2P54317 469 aa14.6□□□□□ -0.07
LIME1-209ENST00000494776 PSMD4P55036 377 aaKnown RBP14.6□□□□□ -0.07
LIME1-209ENST00000494776 NME5P56597 212 aa14.6□□□□□ -0.07
LIME1-209ENST00000494776 SNTA1Q13424 505 aa14.6□□□□□ -0.07
LIME1-209ENST00000494776 C3AR1Q16581 482 aa14.6□□□□□ -0.07
LIME1-209ENST00000494776 OR4F3Q6IEY1 312 aa14.6□□□□□ -0.07
LIME1-209ENST00000494776 OGFOD2Q6N063 350 aa14.6□□□□□ -0.07
LIME1-209ENST00000494776 CDRT4Q8N9R6 151 aa14.6□□□□□ -0.07
LIME1-209ENST00000494776 OR1J4Q8NGS1 313 aa14.6□□□□□ -0.07
LIME1-209ENST00000494776 FBXO30Q8TB52 745 aa14.6□□□□□ -0.07
LIME1-209ENST00000494776 JADE3Q92613 823 aa14.6□□□□□ -0.07
LIME1-209ENST00000494776 SLC35A4Q96G79 324 aa14.6□□□□□ -0.07
LIME1-209ENST00000494776 C7orf26Q96N11 449 aa14.6□□□□□ -0.07
LIME1-209ENST00000494776 NEUROD4Q9HD90 331 aa14.6□□□□□ -0.07
LIME1-209ENST00000494776 TINAGQ9UJW2 476 aa14.6□□□□□ -0.07
LIME1-209ENST00000494776 PCDHGB4Q9UN71 923 aa14.6□□□□□ -0.07
LIME1-209ENST00000494776 ZNF835Q9Y2P0 537 aa14.6□□□□□ -0.07
LIME1-209ENST00000494776 C2orf72A6NCS6 295 aa14.59□□□□□ -0.07
LIME1-209ENST00000494776 LRRC3CA6NJW4 275 aa14.59□□□□□ -0.07
LIME1-209ENST00000494776 DIAPH2O60879 1101 aa14.59□□□□□ -0.07
LIME1-209ENST00000494776 ICOSLGO75144 302 aa14.59□□□□□ -0.07
LIME1-209ENST00000494776 TPOP07202 933 aa14.59□□□□□ -0.07
LIME1-209ENST00000494776 CELA3AP09093 270 aa14.59□□□□□ -0.07
LIME1-209ENST00000494776 ALOX5P09917 674 aa14.59□□□□□ -0.07
LIME1-209ENST00000494776 RFPL3SP0C7P2 107 aa14.59□□□□□ -0.07
LIME1-209ENST00000494776 SOAT1P35610 550 aa14.59□□□□□ -0.07
LIME1-209ENST00000494776 KIR3DL1P43629 444 aa14.59□□□□□ -0.07
LIME1-209ENST00000494776 MAN2A2P49641 1150 aa14.59□□□□□ -0.07
LIME1-209ENST00000494776 TP53BP2Q13625 1128 aa14.59□□□□□ -0.07
LIME1-209ENST00000494776 SLC9B1Q4ZJI4 515 aa14.59□□□□□ -0.07
LIME1-209ENST00000494776 ANXA8L1Q5VT79 327 aa14.59□□□□□ -0.07
LIME1-209ENST00000494776 TMEM81Q6P7N7 255 aa14.59□□□□□ -0.07
LIME1-209ENST00000494776 ANGPTL8Q6UXH0 198 aa14.59□□□□□ -0.07
LIME1-209ENST00000494776 Q6ZPB1 254 aaPredicted RBP14.59□□□□□ -0.07
LIME1-209ENST00000494776 CAMKMTQ7Z624 323 aa14.59□□□□□ -0.07
LIME1-209ENST00000494776 VPS37AQ8NEZ2 397 aa14.59□□□□□ -0.07
LIME1-209ENST00000494776 OR56A1Q8NGH5 318 aa14.59□□□□□ -0.07
LIME1-209ENST00000494776 RELTQ969Z4 430 aa14.59□□□□□ -0.07
LIME1-209ENST00000494776 FAM120BQ96EK7 910 aaKnown RBP14.59□□□□□ -0.07
LIME1-209ENST00000494776 RMND5BQ96G75 393 aaPredicted RBP14.59□□□□□ -0.07
LIME1-209ENST00000494776 TMEM41AQ96HV5 264 aa14.59□□□□□ -0.07
LIME1-209ENST00000494776 GNRHR2Q96P88 292 aa14.59□□□□□ -0.07
LIME1-209ENST00000494776 ZBTB18Q99592 522 aa14.59□□□□□ -0.07
LIME1-209ENST00000494776 YIPF4Q9BSR8 244 aa14.59□□□□□ -0.07
LIME1-209ENST00000494776 ZNF703Q9H7S9 590 aaPredicted RBP14.59□□□□□ -0.07
LIME1-209ENST00000494776 GALNT9Q9HCQ5 603 aa14.59□□□□□ -0.07
LIME1-209ENST00000494776 PLSCR2Q9NRY7 297 aa14.59□□□□□ -0.07
LIME1-209ENST00000494776 SIRT3Q9NTG7 399 aaPredicted RBP14.59□□□□□ -0.07
LIME1-209ENST00000494776 AIG1Q9NVV5 245 aa14.59□□□□□ -0.07
LIME1-209ENST00000494776 NTMQ9P121 344 aa14.59□□□□□ -0.07
LIME1-209ENST00000494776 USH1CQ9Y6N9 552 aa14.59□□□□□ -0.07
LIME1-209ENST00000494776 EML6Q6ZMW3 1958 aa14.58□□□□□ -0.07
LIME1-209ENST00000494776 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.58□□□□□ -0.08
LIME1-209ENST00000494776 UQCRHLA0A096LP55 91 aa14.58□□□□□ -0.08
LIME1-209ENST00000494776 TRGV5A0A0B4J1U4 118 aa14.58□□□□□ -0.08
LIME1-209ENST00000494776 NPIPA2E9PIF3 369 aa14.58□□□□□ -0.08
LIME1-209ENST00000494776 NPIPA3F8WFD2 350 aa14.58□□□□□ -0.08
LIME1-209ENST00000494776 LDLRP01130 860 aa14.58□□□□□ -0.08
LIME1-209ENST00000494776 ALDOCP09972 364 aaKnown RBP14.58□□□□□ -0.08
LIME1-209ENST00000494776 CYP4B1P13584 511 aa14.58□□□□□ -0.08
LIME1-209ENST00000494776 ELAVL4P26378 380 aaKnown RBP14.58□□□□□ -0.08
LIME1-209ENST00000494776 S100A3P33764 101 aa14.58□□□□□ -0.08
LIME1-209ENST00000494776 CLK3P49761 638 aaKnown RBP14.58□□□□□ -0.08
LIME1-209ENST00000494776 DPY19L1Q2PZI1 675 aa14.58□□□□□ -0.08
LIME1-209ENST00000494776 MFSD12Q6NUT3 480 aa14.58□□□□□ -0.08
LIME1-209ENST00000494776 ZCCHC12Q6PEW1 402 aa14.58□□□□□ -0.08
LIME1-209ENST00000494776 BHLHB9Q6PI77 547 aa14.58□□□□□ -0.08
LIME1-209ENST00000494776 ACAD11Q709F0 780 aa14.58□□□□□ -0.08
LIME1-209ENST00000494776 TRILQ7L0X0 811 aa14.58□□□□□ -0.08
LIME1-209ENST00000494776 CD163Q86VB7 1156 aa14.58□□□□□ -0.08
LIME1-209ENST00000494776 ZGRF1Q86YA3 2104 aa14.58□□□□□ -0.08
LIME1-209ENST00000494776 EID3Q8N140 333 aa14.58□□□□□ -0.08
LIME1-209ENST00000494776 OR8J2Q8NGG1 315 aa14.58□□□□□ -0.08
LIME1-209ENST00000494776 OR4A15Q8NGL6 344 aa14.58□□□□□ -0.08
LIME1-209ENST00000494776 FAM57AQ8TBR7 257 aa14.58□□□□□ -0.08
LIME1-209ENST00000494776 ACTRT2Q8TDY3 377 aa14.58□□□□□ -0.08
LIME1-209ENST00000494776 PIK3R3Q92569 461 aa14.58□□□□□ -0.08
LIME1-209ENST00000494776 TESCQ96BS2 214 aa14.58□□□□□ -0.08
LIME1-209ENST00000494776 MOAP1Q96BY2 351 aa14.58□□□□□ -0.08
LIME1-209ENST00000494776 GIMAP5Q96F15 307 aa14.58□□□□□ -0.08
LIME1-209ENST00000494776 C16orf58Q96GQ5 468 aa14.58□□□□□ -0.08
LIME1-209ENST00000494776 CXorf36Q9H7Y0 433 aa14.58□□□□□ -0.08
LIME1-209ENST00000494776 SLCO1B3Q9NPD5 702 aa14.58□□□□□ -0.08
LIME1-209ENST00000494776 QPCTLQ9NXS2 382 aa14.58□□□□□ -0.08
LIME1-209ENST00000494776 FAF1Q9UNN5 650 aaPredicted RBP14.58□□□□□ -0.08
LIME1-209ENST00000494776 LIPGQ9Y5X9 500 aa14.58□□□□□ -0.08
LIME1-209ENST00000494776 FLNCQ14315 2725 aa14.58□□□□□ -0.08
LIME1-209ENST00000494776 GXYLT2A0PJZ3 443 aa14.57□□□□□ -0.08
LIME1-209ENST00000494776 E9PBE3 544 aa14.57□□□□□ -0.08
LIME1-209ENST00000494776 RNASET2O00584 256 aaKnown RBP14.57□□□□□ -0.08
LIME1-209ENST00000494776 SUSD5O60279 629 aa14.57□□□□□ -0.08
LIME1-209ENST00000494776 HCN1O60741 890 aa14.57□□□□□ -0.08
LIME1-209ENST00000494776 NKX2-2O95096 273 aa14.57□□□□□ -0.08
LIME1-209ENST00000494776 CPSF4O95639 269 aaKnown RBP14.57□□□□□ -0.08
LIME1-209ENST00000494776 IL33O95760 270 aa14.57□□□□□ -0.08
LIME1-209ENST00000494776 IGHG3P01860 377 aa14.57□□□□□ -0.08
LIME1-209ENST00000494776 HMGN2P05204 90 aaKnown RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms