RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 DLGAP4Q9Y2H0 992 aa8.72□□□□□ -1.01
UBR4-216ENST00000494503 USF3Q68DE3 2245 aa8.72□□□□□ -1.01
UBR4-216ENST00000494503 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 HMX2A2RU54 273 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 C17orf51A8MQB3 221 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 POC1B-GALNT4F8VUJ3 575 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 STX16-NPEPL1H3BU86 382 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 STX16O14662 325 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 CTIFO43310 598 aaKnown RBP8.71□□□□□ -1.02
UBR4-216ENST00000494503 PCDH7O60245 1069 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 TNFSF13O75888 250 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 BCAS2O75934 225 aaPredicted RBP8.71□□□□□ -1.02
UBR4-216ENST00000494503 OR4F21O95013 312 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 PLGP00747 810 aaPredicted RBP8.71□□□□□ -1.02
UBR4-216ENST00000494503 IL3P08700 152 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 PEPDP12955 493 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 ZNF708P17019 499 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 HMOX2P30519 316 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 EVI2BP34910 448 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 CD79BP40259 229 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 EMDP50402 254 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 DSCR4P56555 118 aaPredicted RBP8.71□□□□□ -1.02
UBR4-216ENST00000494503 CLDN18P56856 261 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 MRPS22P82650 360 aaKnown RBP8.71□□□□□ -1.02
UBR4-216ENST00000494503 BTKQ06187 659 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 MGAT2Q10469 447 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 GALNT1Q10472 559 aaPredicted RBP8.71□□□□□ -1.02
UBR4-216ENST00000494503 CBLBQ13191 982 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 SGCBQ16585 318 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 TSNAXIP1Q2TAA8 658 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 TCHHL1Q5QJ38 904 aaPredicted RBP8.71□□□□□ -1.02
UBR4-216ENST00000494503 C8orf74Q6P047 294 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 LETMD1Q6P1Q0 360 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 METTL2BQ6P1Q9 378 aaKnown RBP8.71□□□□□ -1.02
UBR4-216ENST00000494503 TMEM81Q6P7N7 255 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 ZDHHC24Q6UX98 284 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 BTLAQ7Z6A9 289 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 CXorf67Q86X51 503 aaPredicted RBP8.71□□□□□ -1.02
UBR4-216ENST00000494503 FAM9CQ8IZT9 166 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 CEP112Q8N8E3 955 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 UHMK1Q8TAS1 419 aaKnown RBP8.71□□□□□ -1.02
UBR4-216ENST00000494503 FIG4Q92562 907 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 GPR78Q96P69 363 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 BBS4Q96RK4 519 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 PIGQQ9BRB3 760 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 G6PC3Q9BUM1 346 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 NTMT1Q9BV86 223 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 EBPLQ9BY08 206 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 STMN4Q9H169 189 aaPredicted RBP8.71□□□□□ -1.02
UBR4-216ENST00000494503 DSN1Q9H410 356 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 FOLH1BQ9HBA9 442 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 TAS2R9Q9NYW1 312 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 MED11Q9P086 117 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 VPS29Q9UBQ0 182 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 CES1P1Q9UKY3 287 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 PYCARDQ9ULZ3 195 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 PROCRQ9UNN8 238 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 GPR55Q9Y2T6 319 aaPredicted RBP8.71□□□□□ -1.02
UBR4-216ENST00000494503 PCNX3Q9H6A9 2034 aa8.71□□□□□ -1.02
UBR4-216ENST00000494503 INAFM1C9JVW0 142 aa8.7□□□□□ -1.02
UBR4-216ENST00000494503 H0YC42 278 aa8.7□□□□□ -1.02
UBR4-216ENST00000494503 C16orf97H3BN30 126 aa8.7□□□□□ -1.02
UBR4-216ENST00000494503 PPP6CO00743 305 aa8.7□□□□□ -1.02
UBR4-216ENST00000494503 TO15178 435 aa8.7□□□□□ -1.02
UBR4-216ENST00000494503 SUPT7LO94864 414 aa8.7□□□□□ -1.02
UBR4-216ENST00000494503 KRT6AP02538 564 aa8.7□□□□□ -1.02
UBR4-216ENST00000494503 KRT6BP04259 564 aa8.7□□□□□ -1.02
UBR4-216ENST00000494503 UGT2B10P36537 528 aa8.7□□□□□ -1.02
UBR4-216ENST00000494503 MC3RP41968 323 aa8.7□□□□□ -1.02
UBR4-216ENST00000494503 KRT6CP48668 564 aa8.7□□□□□ -1.02
UBR4-216ENST00000494503 CLK3P49761 638 aaKnown RBP8.7□□□□□ -1.02
UBR4-216ENST00000494503 TPD52P55327 224 aaPredicted RBP8.7□□□□□ -1.02
UBR4-216ENST00000494503 EEFSECP57772 596 aaKnown RBP8.7□□□□□ -1.02
UBR4-216ENST00000494503 RPS3AP61247 264 aaKnown RBP8.7□□□□□ -1.02
UBR4-216ENST00000494503 ACSM2AQ08AH3 577 aa8.7□□□□□ -1.02
UBR4-216ENST00000494503 PON3Q15166 354 aa8.7□□□□□ -1.02
UBR4-216ENST00000494503 ACKR1Q16570 336 aa8.7□□□□□ -1.02
UBR4-216ENST00000494503 GGTA1PQ4G0N0 100 aa8.7□□□□□ -1.02
UBR4-216ENST00000494503 ZNF628Q5EBL2 1059 aa8.7□□□□□ -1.02
UBR4-216ENST00000494503 SPDYAQ5MJ70 313 aa8.7□□□□□ -1.02
UBR4-216ENST00000494503 LGSNQ5TDP6 509 aa8.7□□□□□ -1.02
UBR4-216ENST00000494503 ACSM2BQ68CK6 577 aa8.7□□□□□ -1.02
UBR4-216ENST00000494503 NPSR1Q6W5P4 371 aa8.7□□□□□ -1.02
UBR4-216ENST00000494503 SZRD1Q7Z422 152 aa8.7□□□□□ -1.02
UBR4-216ENST00000494503 GBP7Q8N8V2 638 aaPredicted RBP8.7□□□□□ -1.02
UBR4-216ENST00000494503 OR4N2Q8NGD1 307 aa8.7□□□□□ -1.02
UBR4-216ENST00000494503 FNDC9Q8TBE3 224 aa8.7□□□□□ -1.02
UBR4-216ENST00000494503 NTNG2Q96CW9 530 aa8.7□□□□□ -1.02
UBR4-216ENST00000494503 STARD4Q96DR4 205 aa8.7□□□□□ -1.02
UBR4-216ENST00000494503 SLC35A4Q96G79 324 aa8.7□□□□□ -1.02
UBR4-216ENST00000494503 COX4I2Q96KJ9 171 aa8.7□□□□□ -1.02
UBR4-216ENST00000494503 BTBD9Q96Q07 612 aa8.7□□□□□ -1.02
UBR4-216ENST00000494503 REPIN1Q9BWE0 567 aaKnown RBP8.7□□□□□ -1.02
UBR4-216ENST00000494503 PTGES2Q9H7Z7 377 aa8.7□□□□□ -1.02
UBR4-216ENST00000494503 BRF2Q9HAW0 419 aa8.7□□□□□ -1.02
UBR4-216ENST00000494503 MIEF1Q9NQG6 463 aa8.7□□□□□ -1.02
UBR4-216ENST00000494503 SDHAF3Q9NRP4 125 aa8.7□□□□□ -1.02
UBR4-216ENST00000494503 NINJ2Q9NZG7 142 aa8.7□□□□□ -1.02
UBR4-216ENST00000494503 HEY2Q9UBP5 337 aa8.7□□□□□ -1.02
UBR4-216ENST00000494503 ZNF639Q9UID6 485 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms