RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 GXYLT2A0PJZ3 443 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 K7EM74 188 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 ASNA1O43681 348 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 DPM1O60762 260 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 PPM1BO75688 479 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 C1QCP02747 245 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 OR12D1P0DN82 309 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 NAGAP17050 411 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 CD96P40200 585 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 MAN2A2P49641 1150 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 NUDT2P50583 147 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 MRPS22P82650 360 aaKnown RBP13.42□□□□□ -0.26
BRCA1-223ENST00000494123 ART3Q13508 389 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 CAPRIN1Q14444 709 aaKnown RBP13.42□□□□□ -0.26
BRCA1-223ENST00000494123 KRT72Q14CN4 511 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 OR1C1Q15619 314 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 ZNF468Q5VIY5 522 aaPredicted RBP13.42□□□□□ -0.26
BRCA1-223ENST00000494123 IGFL3Q6UXB1 125 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 TRPM8Q7Z2W7 1104 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 EXD3Q8N9H8 876 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 OR52N2Q8NGI0 321 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 OR5M3Q8NGP4 307 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 XAGE5Q8WWM1 108 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 ROPN1LQ96C74 230 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 LRRC58Q96CX6 371 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 SLC35A4Q96G79 324 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 ANKRD27Q96NW4 1050 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 THUMPD3Q9BV44 507 aaKnown RBP13.42□□□□□ -0.26
BRCA1-223ENST00000494123 BTBD2Q9BX70 525 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 SERHL2Q9H4I8 314 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 ARL8BQ9NVJ2 186 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 CACNA1BQ00975 2339 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 TP53I11O14683 189 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 UNC5CO95185 931 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 FBXO45P0C2W1 286 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 ESRRAP11474 423 aaPredicted RBP13.42□□□□□ -0.26
BRCA1-223ENST00000494123 PIGAP37287 484 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 MAGEA8P43361 318 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 CPA2P48052 419 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 RUNDC3AQ59EK9 446 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 COX20Q5RI15 118 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 EXOSC6Q5RKV6 272 aaKnown RBP13.42□□□□□ -0.26
BRCA1-223ENST00000494123 RTL4Q6ZR62 310 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 C16orf62Q7Z3J2 963 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 BCORP1Q8N888 145 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 RAB8BQ92930 207 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 TMEM125Q96AQ2 219 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 EFHD2Q96C19 240 aaPredicted RBP13.42□□□□□ -0.26
BRCA1-223ENST00000494123 C5orf34Q96MH7 638 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 ADOQ96SZ5 270 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 SLC39A3Q9BRY0 314 aa13.42□□□□□ -0.26
BRCA1-223ENST00000494123 HMGN4O00479 90 aa13.41□□□□□ -0.26
BRCA1-223ENST00000494123 HS6ST1O60243 411 aa13.41□□□□□ -0.26
BRCA1-223ENST00000494123 ABCB7O75027 752 aa13.41□□□□□ -0.26
BRCA1-223ENST00000494123 KCNK2O95069 426 aa13.41□□□□□ -0.26
BRCA1-223ENST00000494123 AK1P00568 194 aa13.41□□□□□ -0.26
BRCA1-223ENST00000494123 ETFAP13804 333 aa13.41□□□□□ -0.26
BRCA1-223ENST00000494123 CD46P15529 392 aa13.41□□□□□ -0.26
BRCA1-223ENST00000494123 ATP6V1C1P21283 382 aa13.41□□□□□ -0.26
BRCA1-223ENST00000494123 MNAT1P51948 309 aa13.41□□□□□ -0.26
BRCA1-223ENST00000494123 FBXW4P57775 412 aa13.41□□□□□ -0.26
BRCA1-223ENST00000494123 MTPNP58546 118 aa13.41□□□□□ -0.26
BRCA1-223ENST00000494123 DSTNP60981 165 aa13.41□□□□□ -0.26
BRCA1-223ENST00000494123 RPP38P78345 283 aaKnown RBP13.41□□□□□ -0.26
BRCA1-223ENST00000494123 MXRA7P84157 204 aa13.41□□□□□ -0.26
BRCA1-223ENST00000494123 FADDQ13158 208 aa13.41□□□□□ -0.26
BRCA1-223ENST00000494123 EFR3AQ14156 821 aa13.41□□□□□ -0.26
BRCA1-223ENST00000494123 LY6DQ14210 128 aa13.41□□□□□ -0.26
BRCA1-223ENST00000494123 RGNQ15493 299 aa13.41□□□□□ -0.26
BRCA1-223ENST00000494123 NTRK2Q16620 822 aa13.41□□□□□ -0.26
BRCA1-223ENST00000494123 ZNF791Q3KP31 576 aaPredicted RBP13.41□□□□□ -0.26
BRCA1-223ENST00000494123 DCST2Q5T1A1 773 aa13.41□□□□□ -0.26
BRCA1-223ENST00000494123 SPINK14Q6IE38 97 aa13.41□□□□□ -0.26
BRCA1-223ENST00000494123 FIGNL1Q6PIW4 674 aa13.41□□□□□ -0.26
BRCA1-223ENST00000494123 LYPD8Q6UX82 237 aa13.41□□□□□ -0.26
BRCA1-223ENST00000494123 DIO2Q92813 273 aa13.41□□□□□ -0.26
BRCA1-223ENST00000494123 WBP1Q96G27 269 aa13.41□□□□□ -0.26
BRCA1-223ENST00000494123 NSL1Q96IY1 281 aa13.41□□□□□ -0.26
BRCA1-223ENST00000494123 SGCZQ96LD1 299 aa13.41□□□□□ -0.26
BRCA1-223ENST00000494123 COL21A1Q96P44 957 aa13.41□□□□□ -0.26
BRCA1-223ENST00000494123 SIGLEC12Q96PQ1 595 aa13.41□□□□□ -0.26
BRCA1-223ENST00000494123 SH3GL1Q99961 368 aa13.41□□□□□ -0.26
BRCA1-223ENST00000494123 CPPED1Q9BRF8 314 aaPredicted RBP13.41□□□□□ -0.26
BRCA1-223ENST00000494123 G6PC3Q9BUM1 346 aa13.41□□□□□ -0.26
BRCA1-223ENST00000494123 SLC25A18Q9H1K4 315 aa13.41□□□□□ -0.26
BRCA1-223ENST00000494123 TRIM45Q9H8W5 580 aaPredicted RBP13.41□□□□□ -0.26
BRCA1-223ENST00000494123 TIMMDC1Q9NPL8 285 aa13.41□□□□□ -0.26
BRCA1-223ENST00000494123 THUMPD1Q9NXG2 353 aaKnown RBP13.41□□□□□ -0.26
BRCA1-223ENST00000494123 KCNE3Q9Y6H6 103 aa13.41□□□□□ -0.26
BRCA1-223ENST00000494123 EXPH5Q8NEV8 1989 aa13.41□□□□□ -0.26
BRCA1-223ENST00000494123 TMEM247A6NEH6 219 aa13.4□□□□□ -0.26
BRCA1-223ENST00000494123 OR6C70A6NIJ9 312 aa13.4□□□□□ -0.26
BRCA1-223ENST00000494123 SLC25A12O75746 678 aa13.4□□□□□ -0.26
BRCA1-223ENST00000494123 CBX6O95503 412 aa13.4□□□□□ -0.26
BRCA1-223ENST00000494123 IL33O95760 270 aa13.4□□□□□ -0.26
BRCA1-223ENST00000494123 CD97P48960 835 aa13.4□□□□□ -0.26
BRCA1-223ENST00000494123 TNFSF10P50591 281 aa13.4□□□□□ -0.26
BRCA1-223ENST00000494123 MVDP53602 400 aa13.4□□□□□ -0.26
BRCA1-223ENST00000494123 PNLIPRP2P54317 469 aa13.4□□□□□ -0.26
BRCA1-223ENST00000494123 HPCAP84074 193 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms