RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 SKP1P63208 163 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 EEF1A1P68104 462 aaKnown RBP9.93□□□□□ -0.82
CLCN6-208ENST00000494028 MAT1AQ00266 395 aaKnown RBP9.93□□□□□ -0.82
CLCN6-208ENST00000494028 BNC1Q01954 994 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 PLAURQ03405 335 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 SRSF5Q13243 272 aaKnown RBP9.93□□□□□ -0.82
CLCN6-208ENST00000494028 TUBA3CQ13748 450 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 NR1D2Q14995 579 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 SHBQ15464 509 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 EIPR1Q53HC9 387 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 GARNL3Q5VVW2 1013 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 C12orf73Q69YU5 71 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 NIPAL1Q6NVV3 410 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 AHSA2Q719I0 299 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 SLC35F3Q8IY50 421 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 ZNF619Q8N2I2 560 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 VWA5B2Q8N398 1253 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 SVOPQ8N4V2 548 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 COX18Q8N8Q8 333 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 CDRT4Q8N9R6 151 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 OR4K5Q8NGD3 323 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 RHOXF1Q8NHV9 184 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 IPCEF1Q8WWN9 437 aaPredicted RBP9.93□□□□□ -0.82
CLCN6-208ENST00000494028 SDF2Q99470 211 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 FNDC11Q9BVV2 318 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 C11orf16Q9NQ32 467 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 CTPS2Q9NRF8 586 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 PLCXD1Q9NUJ7 323 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 IMPAD1Q9NX62 359 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 SCN3BQ9NY72 215 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 SLC6A14Q9UN76 642 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 IGHV1OR21-1A0A087WYE8 117 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 NPIPA5A0A0B4J1W7 369 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 GXYLT2A0PJZ3 443 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 BLACEA4D250 179 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 AGAP5A6NIR3 686 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 CPSF4LA6NMK7 179 aaKnown RBP9.92□□□□□ -0.82
CLCN6-208ENST00000494028 RHPN2P1A8MT19 583 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 ZNF99A8MXY4 864 aaPredicted RBP9.92□□□□□ -0.82
CLCN6-208ENST00000494028 PTGES3LE9PB15 166 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 NPIPA7E9PJI5 369 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 H3BMH7 237 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 ZNF749O43361 778 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 NOL3O60936 208 aaKnown RBP9.92□□□□□ -0.82
CLCN6-208ENST00000494028 TRMUO75648 421 aaKnown RBP9.92□□□□□ -0.82
CLCN6-208ENST00000494028 INMTO95050 263 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 NKX2-2O95096 273 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 ATE1O95260 518 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 ZBTB11O95625 1053 aaPredicted RBP9.92□□□□□ -0.82
CLCN6-208ENST00000494028 IGFBP1P08833 259 aaPredicted RBP9.92□□□□□ -0.82
CLCN6-208ENST00000494028 NPIPA8P0DM63 369 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 MMP11P24347 488 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 CNR2P34972 360 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 AVPR1BP47901 424 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 ZNF136P52737 540 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 TAS2R41P59536 307 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 LSM11P83369 360 aaKnown RBP eCLIP9.92□□□□□ -0.82
CLCN6-208ENST00000494028 ALDH6A1Q02252 535 aaKnown RBP9.92□□□□□ -0.82
CLCN6-208ENST00000494028 MVKQ03426 396 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 FOXD4Q12950 439 aaPredicted RBP9.92□□□□□ -0.82
CLCN6-208ENST00000494028 FAM53BQ14153 422 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 PTGES3Q15185 160 aaKnown RBP9.92□□□□□ -0.82
CLCN6-208ENST00000494028 TBCEQ15813 527 aaPredicted RBP9.92□□□□□ -0.82
CLCN6-208ENST00000494028 SYT16Q17RD7 645 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 WDR45BQ5MNZ6 344 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 TMEM201Q5SNT2 666 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 NKAIN2Q5VXU1 208 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 TMEM236Q5W0B7 351 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 ZCCHC12Q6PEW1 402 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 CD300LDQ6UXZ3 194 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 SLC16A12Q6ZSM3 486 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 PLEKHM3Q6ZWE6 761 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 PRSS48Q7RTY5 328 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 ERI1Q8IV48 349 aaKnown RBP9.92□□□□□ -0.82
CLCN6-208ENST00000494028 P3H2Q8IVL5 708 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 GALNT12Q8IXK2 581 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 PEX5LQ8IYB4 626 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 ZNF595Q8IYB9 648 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 CLIP4Q8N3C7 705 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 METTL27Q8N6F8 245 aaPredicted RBP9.92□□□□□ -0.82
CLCN6-208ENST00000494028 ZNF540Q8NDQ6 660 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 OR52R1Q8NGF1 315 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 PIK3R3Q92569 461 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 ZG16BQ96DA0 208 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 PEX11GQ96HA9 241 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 LMF2Q9BU23 707 aaKnown RBP9.92□□□□□ -0.82
CLCN6-208ENST00000494028 CCDC90BQ9GZT6 254 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 SAP130Q9H0E3 1048 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 ANKRD19PQ9H560 264 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 FOLH1BQ9HBA9 442 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 PDE7BQ9NP56 450 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 PRMT8Q9NR22 394 aaPredicted RBP9.92□□□□□ -0.82
CLCN6-208ENST00000494028 PRTFDC1Q9NRG1 225 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 ENAMQ9NRM1 1142 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 SEMA4GQ9NTN9 838 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 PSORS1C1Q9UIG5 152 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 ENPP5Q9UJA9 477 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 SLC13A4Q9UKG4 626 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 MKLN1Q9UL63 735 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 CLCA2Q9UQC9 943 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms