RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 GPR137Q96N19 417 aa10.69□□□□□ -0.7
UBA3-211ENST00000493957 FAM173AQ9BQD7 235 aa10.69□□□□□ -0.7
UBA3-211ENST00000493957 LMF2Q9BU23 707 aaKnown RBP10.69□□□□□ -0.7
UBA3-211ENST00000493957 TTTY12Q9BZ98 90 aa10.69□□□□□ -0.7
UBA3-211ENST00000493957 BHLHE41Q9C0J9 482 aaPredicted RBP10.69□□□□□ -0.7
UBA3-211ENST00000493957 CLMPQ9H6B4 373 aa10.69□□□□□ -0.7
UBA3-211ENST00000493957 ATAD3AQ9NVI7 634 aa10.69□□□□□ -0.7
UBA3-211ENST00000493957 TAS2R9Q9NYW1 312 aa10.69□□□□□ -0.7
UBA3-211ENST00000493957 NTMQ9P121 344 aa10.69□□□□□ -0.7
UBA3-211ENST00000493957 SNX8Q9Y5X2 465 aa10.69□□□□□ -0.7
UBA3-211ENST00000493957 LIPGQ9Y5X9 500 aa10.69□□□□□ -0.7
UBA3-211ENST00000493957 PTPN13Q12923 2485 aa10.69□□□□□ -0.7
UBA3-211ENST00000493957 SPTBN1Q01082 2364 aaKnown RBP10.69□□□□□ -0.7
UBA3-211ENST00000493957 SPTAN1Q13813 2472 aaKnown RBP10.68□□□□□ -0.7
UBA3-211ENST00000493957 E9PBE3 544 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 TFECO14948 347 aaPredicted RBP10.68□□□□□ -0.7
UBA3-211ENST00000493957 CFLARO15519 480 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 EMC8O43402 210 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 SCN2BO60939 215 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 SEMA7AO75326 666 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 IGKV1D-16P01601 117 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 IFI6P09912 130 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 CYP4B1P13584 511 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 CD1EP15812 388 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 MAP3K8P41279 467 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 AQP5P55064 265 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 KCNJ2P63252 427 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 PLGLB1Q02325 96 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 GAB1Q13480 694 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 DUSP5Q16690 384 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 FAM174BQ3ZCQ3 159 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 FNDC7Q5VTL7 733 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 MFSD12Q6NUT3 480 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 GFRALQ6UXV0 394 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 RGS9BPQ6ZS82 235 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 TMEM251Q8N6I4 163 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 SLC16A11Q8NCK7 471 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 OR9I1Q8NGQ6 314 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 RFWD2Q8NHY2 731 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 PSMA8Q8TAA3 256 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 OR5P2Q8WZ92 322 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 HOXB13Q92826 284 aaPredicted RBP10.68□□□□□ -0.7
UBA3-211ENST00000493957 TESCQ96BS2 214 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 NTNG2Q96CW9 530 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 JSRP1Q96MG2 331 aaPredicted RBP10.68□□□□□ -0.7
UBA3-211ENST00000493957 RILPQ96NA2 401 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 COL21A1Q96P44 957 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 MS4A4EQ96PG1 132 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 ADOQ96SZ5 270 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 DEFB127Q9H1M4 99 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 SERHL2Q9H4I8 314 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 GALNT9Q9HCQ5 603 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 ZCCHC3Q9NUD5 404 aaKnown RBP10.68□□□□□ -0.7
UBA3-211ENST00000493957 SEC14L3Q9UDX4 400 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 OSGIN2Q9Y236 505 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 OR10H1Q9Y4A9 318 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.68□□□□□ -0.7
UBA3-211ENST00000493957 CACNA1CQ13936 2221 aa10.68□□□□□ -0.7
UBA3-211ENST00000493957 COL12A1Q99715 3063 aa10.67□□□□□ -0.7
UBA3-211ENST00000493957 B4DXG7 233 aa10.67□□□□□ -0.7
UBA3-211ENST00000493957 ADAM10O14672 748 aa10.67□□□□□ -0.7
UBA3-211ENST00000493957 TP53I11O14683 189 aa10.67□□□□□ -0.7
UBA3-211ENST00000493957 ASNA1O43681 348 aa10.67□□□□□ -0.7
UBA3-211ENST00000493957 CDC40O60508 579 aaKnown RBP eCLIP10.67□□□□□ -0.7
UBA3-211ENST00000493957 EDF1O60869 148 aaKnown RBP10.67□□□□□ -0.7
UBA3-211ENST00000493957 TRIM3O75382 744 aaPredicted RBP10.67□□□□□ -0.7
UBA3-211ENST00000493957 PDE9AO76083 593 aa10.67□□□□□ -0.7
UBA3-211ENST00000493957 CPSF4O95639 269 aaKnown RBP10.67□□□□□ -0.7
UBA3-211ENST00000493957 HMGN2P05204 90 aaKnown RBP10.67□□□□□ -0.7
UBA3-211ENST00000493957 GABRA3P34903 492 aa10.67□□□□□ -0.7
UBA3-211ENST00000493957 SOAT1P35610 550 aa10.67□□□□□ -0.7
UBA3-211ENST00000493957 CASP3P42574 277 aa10.67□□□□□ -0.7
UBA3-211ENST00000493957 MAGEA5P43359 124 aa10.67□□□□□ -0.7
UBA3-211ENST00000493957 KIR3DL1P43629 444 aa10.67□□□□□ -0.7
UBA3-211ENST00000493957 RFX3P48380 749 aa10.67□□□□□ -0.7
UBA3-211ENST00000493957 CCT3P49368 545 aaKnown RBP10.67□□□□□ -0.7
UBA3-211ENST00000493957 TMED10P49755 219 aaKnown RBP10.67□□□□□ -0.7
UBA3-211ENST00000493957 CASP9P55211 416 aa10.67□□□□□ -0.7
UBA3-211ENST00000493957 RPS26P62854 115 aaKnown RBP10.67□□□□□ -0.7
UBA3-211ENST00000493957 PPIAP62937 165 aaKnown RBP10.67□□□□□ -0.7
UBA3-211ENST00000493957 SF3A3Q12874 501 aaKnown RBP eCLIP10.67□□□□□ -0.72e-6■□□□□ 9.1
UBA3-211ENST00000493957 TP53BP2Q13625 1128 aa10.67□□□□□ -0.7
UBA3-211ENST00000493957 LASP1Q14847 261 aaKnown RBP10.67□□□□□ -0.7
UBA3-211ENST00000493957 EXOSC6Q5RKV6 272 aaKnown RBP10.67□□□□□ -0.7
UBA3-211ENST00000493957 GK5Q6ZS86 529 aa10.67□□□□□ -0.7
UBA3-211ENST00000493957 ZAR1Q86SH2 424 aa10.67□□□□□ -0.7
UBA3-211ENST00000493957 DND1Q8IYX4 353 aaKnown RBP10.67□□□□□ -0.7
UBA3-211ENST00000493957 POGLUT1Q8NBL1 392 aa10.67□□□□□ -0.7
UBA3-211ENST00000493957 OR8J2Q8NGG1 315 aa10.67□□□□□ -0.7
UBA3-211ENST00000493957 OR4A15Q8NGL6 344 aa10.67□□□□□ -0.7
UBA3-211ENST00000493957 CEP70Q8NHQ1 597 aa10.67□□□□□ -0.7
UBA3-211ENST00000493957 RMND5BQ96G75 393 aaPredicted RBP10.67□□□□□ -0.7
UBA3-211ENST00000493957 SLC35A4Q96G79 324 aa10.67□□□□□ -0.7
UBA3-211ENST00000493957 PRPF18Q99633 342 aaKnown RBP10.67□□□□□ -0.7
UBA3-211ENST00000493957 INPP5KQ9BT40 448 aa10.67□□□□□ -0.7
UBA3-211ENST00000493957 DOHHQ9BU89 302 aa10.67□□□□□ -0.7
UBA3-211ENST00000493957 RTN4RQ9BZR6 473 aa10.67□□□□□ -0.7
UBA3-211ENST00000493957 IL1RL2Q9HB29 575 aa10.67□□□□□ -0.7
UBA3-211ENST00000493957 C3orf14Q9HBI5 128 aa10.67□□□□□ -0.7
UBA3-211ENST00000493957 TCF7L2Q9NQB0 619 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms