RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 ZNF630Q2M218 657 aaPredicted RBP17.91■□□□□ 0.46
USP39-218ENST00000493829 DEFB109BQ30KR1 87 aa17.91■□□□□ 0.46
USP39-218ENST00000493829 PGM2L1Q6PCE3 622 aa17.91■□□□□ 0.46
USP39-218ENST00000493829 ZNF441Q8N8Z8 693 aa17.91■□□□□ 0.46
USP39-218ENST00000493829 OR5L2Q8NGL0 311 aa17.91■□□□□ 0.46
USP39-218ENST00000493829 NUBPLQ8TB37 319 aa17.91■□□□□ 0.46
USP39-218ENST00000493829 EFHD2Q96C19 240 aaPredicted RBP17.91■□□□□ 0.46
USP39-218ENST00000493829 FER1L6-AS2Q96M78 137 aa17.91■□□□□ 0.46
USP39-218ENST00000493829 SPATA9Q9BWV2 254 aa17.91■□□□□ 0.46
USP39-218ENST00000493829 BTBD2Q9BX70 525 aa17.91■□□□□ 0.46
USP39-218ENST00000493829 TMEM38AQ9H6F2 299 aa17.91■□□□□ 0.46
USP39-218ENST00000493829 RUBCNLQ9H714 662 aa17.91■□□□□ 0.46
USP39-218ENST00000493829 CBLCQ9ULV8 474 aa17.91■□□□□ 0.46
USP39-218ENST00000493829 RRP8O43159 456 aaKnown RBP17.9■□□□□ 0.46
USP39-218ENST00000493829 OR2J2O76002 312 aa17.9■□□□□ 0.46
USP39-218ENST00000493829 KCNK2O95069 426 aa17.9■□□□□ 0.46
USP39-218ENST00000493829 AGR2O95994 175 aa17.9■□□□□ 0.46
USP39-218ENST00000493829 IGKV1D-16P01601 117 aa17.9■□□□□ 0.46
USP39-218ENST00000493829 TFPTP0C1Z6 253 aa17.9■□□□□ 0.46
USP39-218ENST00000493829 DRD5P21918 477 aa17.9■□□□□ 0.46
USP39-218ENST00000493829 TRHRP34981 398 aaPredicted RBP17.9■□□□□ 0.46
USP39-218ENST00000493829 PLCXD2Q0VAA5 305 aa17.9■□□□□ 0.46
USP39-218ENST00000493829 B3GNTL1Q67FW5 361 aaPredicted RBP17.9■□□□□ 0.46
USP39-218ENST00000493829 ERICH5Q6P6B1 374 aa17.9■□□□□ 0.46
USP39-218ENST00000493829 UNQ6494/PRO21346Q6UXR6 183 aa17.9■□□□□ 0.46
USP39-218ENST00000493829 CCDC81Q6ZN84 652 aa17.9■□□□□ 0.46
USP39-218ENST00000493829 BCORP1Q8N888 145 aa17.9■□□□□ 0.46
USP39-218ENST00000493829 OR8K3Q8NH51 312 aa17.9■□□□□ 0.46
USP39-218ENST00000493829 THAP4Q8WY91 577 aa17.9■□□□□ 0.46
USP39-218ENST00000493829 TMBIM1Q969X1 311 aa17.9■□□□□ 0.46
USP39-218ENST00000493829 RAB3IPQ96QF0 476 aaPredicted RBP17.9■□□□□ 0.46
USP39-218ENST00000493829 ATP13A2Q9NQ11 1180 aa17.9■□□□□ 0.46
USP39-218ENST00000493829 THUMPD1Q9NXG2 353 aaKnown RBP17.9■□□□□ 0.46
USP39-218ENST00000493829 SUCOQ9UBS9 1254 aaKnown RBP17.9■□□□□ 0.46
USP39-218ENST00000493829 POLHQ9Y253 713 aa17.9■□□□□ 0.46
USP39-218ENST00000493829 ANGPT4Q9Y264 503 aa17.9■□□□□ 0.46
USP39-218ENST00000493829 PCDHGB3Q9Y5G1 929 aa17.9■□□□□ 0.46
USP39-218ENST00000493829 NPIPA5A0A0B4J1W7 369 aa17.9■□□□□ 0.46
USP39-218ENST00000493829 A6NL46 340 aa17.9■□□□□ 0.46
USP39-218ENST00000493829 NPIPA7E9PJI5 369 aa17.9■□□□□ 0.46
USP39-218ENST00000493829 CXCR6O00574 342 aa17.9■□□□□ 0.46
USP39-218ENST00000493829 ARPC2O15144 300 aa17.9■□□□□ 0.46
USP39-218ENST00000493829 ZNF354AO60765 605 aaPredicted RBP17.9■□□□□ 0.46
USP39-218ENST00000493829 NPIPA8P0DM63 369 aa17.9■□□□□ 0.46
USP39-218ENST00000493829 HTR1EP28566 365 aa17.9■□□□□ 0.46
USP39-218ENST00000493829 MAGEA8P43361 318 aa17.9■□□□□ 0.46
USP39-218ENST00000493829 RNF144AP50876 292 aaPredicted RBP17.9■□□□□ 0.46
USP39-218ENST00000493829 DCAF7P61962 342 aa17.9■□□□□ 0.46
USP39-218ENST00000493829 TXNL4AP83876 142 aaKnown RBP17.9■□□□□ 0.46
USP39-218ENST00000493829 MS4A2Q01362 244 aa17.9■□□□□ 0.46
USP39-218ENST00000493829 AIMP2Q13155 320 aaKnown RBP17.9■□□□□ 0.46
USP39-218ENST00000493829 LRRC23Q53EV4 343 aaPredicted RBP17.9■□□□□ 0.46
USP39-218ENST00000493829 HEPHL1Q6MZM0 1159 aa17.9■□□□□ 0.46
USP39-218ENST00000493829 CYP2R1Q6VVX0 501 aa17.9■□□□□ 0.46
USP39-218ENST00000493829 ZAR1Q86SH2 424 aa17.9■□□□□ 0.46
USP39-218ENST00000493829 QRSL1Q9H0R6 528 aaKnown RBP17.9■□□□□ 0.46
USP39-218ENST00000493829 MMADHCQ9H3L0 296 aaPredicted RBP17.9■□□□□ 0.46
USP39-218ENST00000493829 CDCP1Q9H5V8 836 aa17.9■□□□□ 0.46
USP39-218ENST00000493829 MYOTQ9UBF9 498 aa17.9■□□□□ 0.46
USP39-218ENST00000493829 MKLN1Q9UL63 735 aa17.9■□□□□ 0.46
USP39-218ENST00000493829 APC2O95996 2303 aa17.89■□□□□ 0.45
USP39-218ENST00000493829 FCMRO60667 390 aa17.89■□□□□ 0.45
USP39-218ENST00000493829 CIB2O75838 187 aa17.89■□□□□ 0.45
USP39-218ENST00000493829 DNAJB5O75953 348 aa17.89■□□□□ 0.45
USP39-218ENST00000493829 ZIC2O95409 532 aaPredicted RBP17.89■□□□□ 0.45
USP39-218ENST00000493829 OPN1SWP03999 348 aa17.89■□□□□ 0.45
USP39-218ENST00000493829 GGT1P19440 569 aa17.89■□□□□ 0.45
USP39-218ENST00000493829 ATP6V1B2P21281 511 aa17.89■□□□□ 0.45
USP39-218ENST00000493829 PIGAP37287 484 aa17.89■□□□□ 0.45
USP39-218ENST00000493829 CRISP3P54108 245 aa17.89■□□□□ 0.45
USP39-218ENST00000493829 RBBP4Q09028 425 aa17.89■□□□□ 0.45
USP39-218ENST00000493829 BNIP2Q12982 314 aa17.89■□□□□ 0.45
USP39-218ENST00000493829 ARHGAP11BQ3KRB8 267 aa17.89■□□□□ 0.45
USP39-218ENST00000493829 REEP3Q6NUK4 255 aa17.89■□□□□ 0.45
USP39-218ENST00000493829 SLC5A8Q8N695 610 aa17.89■□□□□ 0.45
USP39-218ENST00000493829 HIPK4Q8NE63 616 aa17.89■□□□□ 0.45
USP39-218ENST00000493829 TNIP2Q8NFZ5 429 aa17.89■□□□□ 0.45
USP39-218ENST00000493829 FAM162AQ96A26 154 aa17.89■□□□□ 0.45
USP39-218ENST00000493829 OMA1Q96E52 524 aa17.89■□□□□ 0.45
USP39-218ENST00000493829 SDF2Q99470 211 aa17.89■□□□□ 0.45
USP39-218ENST00000493829 TREX2Q9BQ50 279 aaPredicted RBP17.89■□□□□ 0.45
USP39-218ENST00000493829 CPNE5Q9HCH3 593 aa17.89■□□□□ 0.45
USP39-218ENST00000493829 LIPT1Q9Y234 373 aa17.89■□□□□ 0.45
USP39-218ENST00000493829 POMPQ9Y244 141 aa17.89■□□□□ 0.45
USP39-218ENST00000493829 SNX13Q9Y5W8 968 aa17.89■□□□□ 0.45
USP39-218ENST00000493829 TTC36A6NLP5 189 aa17.88■□□□□ 0.45
USP39-218ENST00000493829 ITGA10O75578 1167 aa17.88■□□□□ 0.45
USP39-218ENST00000493829 CAPNS1P04632 268 aa17.88■□□□□ 0.45
USP39-218ENST00000493829 ITPKBP27987 946 aa17.88■□□□□ 0.45
USP39-218ENST00000493829 ABCD3P28288 659 aa17.88■□□□□ 0.45
USP39-218ENST00000493829 IL12BP29460 328 aa17.88■□□□□ 0.45
USP39-218ENST00000493829 RRADP55042 308 aa17.88■□□□□ 0.45
USP39-218ENST00000493829 NRG3P56975 720 aa17.88■□□□□ 0.45
USP39-218ENST00000493829 CHRNEQ04844 493 aa17.88■□□□□ 0.45
USP39-218ENST00000493829 GPR68Q15743 365 aa17.88■□□□□ 0.45
USP39-218ENST00000493829 DECR1Q16698 335 aa17.88■□□□□ 0.45
USP39-218ENST00000493829 SPATS1Q496A3 300 aa17.88■□□□□ 0.45
USP39-218ENST00000493829 C1orf146Q5VVC0 180 aa17.88■□□□□ 0.45
USP39-218ENST00000493829 DESI1Q6ICB0 168 aa17.88■□□□□ 0.45
USP39-218ENST00000493829 CHDHQ8NE62 594 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms