RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 KLHDC7BQ96G42 594 aa7.49□□□□□ -1.21
BRCA1-221ENST00000493795 FKRPQ9H9S5 495 aa7.49□□□□□ -1.21
BRCA1-221ENST00000493795 HRASLS2Q9NWW9 162 aa7.49□□□□□ -1.21
BRCA1-221ENST00000493795 A0A1W2PRU2 124 aa7.49□□□□□ -1.21
BRCA1-221ENST00000493795 MYBPHLA2RUH7 354 aa7.49□□□□□ -1.21
BRCA1-221ENST00000493795 MED6O75586 246 aa7.49□□□□□ -1.21
BRCA1-221ENST00000493795 CLIC3O95833 236 aa7.49□□□□□ -1.21
BRCA1-221ENST00000493795 ITGB2P05107 769 aa7.49□□□□□ -1.21
BRCA1-221ENST00000493795 RPS17P08708 135 aaKnown RBP7.49□□□□□ -1.21
BRCA1-221ENST00000493795 RPL17P18621 184 aaKnown RBP7.49□□□□□ -1.21
BRCA1-221ENST00000493795 HADHBP55084 474 aaKnown RBP7.49□□□□□ -1.21
BRCA1-221ENST00000493795 PRKCZQ05513 592 aa7.49□□□□□ -1.21
BRCA1-221ENST00000493795 SULF2Q8IWU5 870 aa7.49□□□□□ -1.21
BRCA1-221ENST00000493795 OR9I1Q8NGQ6 314 aa7.49□□□□□ -1.21
BRCA1-221ENST00000493795 NT5C3BQ969T7 300 aa7.49□□□□□ -1.21
BRCA1-221ENST00000493795 ZNF486Q96H40 463 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-221ENST00000493795 SLC2A11Q9BYW1 496 aa7.49□□□□□ -1.21
BRCA1-221ENST00000493795 PRDM9Q9NQV7 894 aa7.49□□□□□ -1.21
BRCA1-221ENST00000493795 SH3BGRL2Q9UJC5 107 aa7.49□□□□□ -1.21
BRCA1-221ENST00000493795 CAMSAP1Q5T5Y3 1602 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 LRP5LA4QPB2 252 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 YJEFN3A6XGL0 299 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 KIAA0355O15063 1070 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 PMM2O15305 246 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 SLC16A5O15375 505 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 LCATP04180 440 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 PNMTP11086 282 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 HTR1EP28566 365 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 GGT5P36269 586 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 GJA5P36382 358 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 POU4F3Q15319 338 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 FAM69BQ5VUD6 431 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 NCBP2-AS2Q69YL0 99 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 ZNF783Q6ZMS7 281 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 C15orf54Q8N8G6 183 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 ZFP41Q8N8Y5 198 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 BCL7BQ9BQE9 202 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 VPS25Q9BRG1 176 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 HOXD1Q9GZZ0 328 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 ZNF395Q9H8N7 513 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-221ENST00000493795 RHBDD3Q9Y3P4 386 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 NPFFR2Q9Y5X5 522 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 MAGEB4O15481 346 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-221ENST00000493795 LILRB3O75022 631 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 CDC123O75794 336 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-221ENST00000493795 EPOP01588 193 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 ASGR2P07307 311 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 HOXB2P14652 356 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 ARL2P36404 184 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 GPR4P46093 362 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 NPRL3Q12980 569 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 GPR50Q13585 617 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 GK3PQ14409 553 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 NANOGP8Q6NSW7 305 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 SUSD1Q6UWL2 747 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 TMEM107Q6UX40 140 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 Q6ZVU0 165 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 SERPINA12Q8IW75 414 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 IL22RA1Q8N6P7 574 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 OR5D16Q8NGK9 328 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 OR4Q3Q8NH05 313 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 DNAJA3Q96EY1 480 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 FAM163AQ96GL9 167 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-221ENST00000493795 ZNF587Q96SQ5 575 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-221ENST00000493795 GPR22Q99680 433 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 PDCD1LG2Q9BQ51 273 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 HRH4Q9H3N8 390 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 NANOGQ9H9S0 305 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 ZNF160Q9HCG1 818 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 SIDT1Q9NXL6 827 aaKnown RBP7.48□□□□□ -1.21
BRCA1-221ENST00000493795 PUS1Q9Y606 427 aaKnown RBP eCLIP7.48□□□□□ -1.21
BRCA1-221ENST00000493795 TRPM1Q7Z4N2 1603 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 WASH4PA8MWX3 477 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 NFKBIEO00221 500 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 TRAF3IP2O43734 574 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-221ENST00000493795 SRPX2O60687 465 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-221ENST00000493795 TP53P04637 393 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-221ENST00000493795 IGFBP1P08833 259 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-221ENST00000493795 IL32P24001 234 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 ETV6P41212 452 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 FLT3LGP49771 235 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 WDR4P57081 412 aaKnown RBP7.48□□□□□ -1.21
BRCA1-221ENST00000493795 RPS24P62847 133 aaKnown RBP7.48□□□□□ -1.21
BRCA1-221ENST00000493795 ACY1Q03154 408 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 SRYQ05066 204 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 GALEQ14376 348 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 SF3A2Q15428 464 aaKnown RBP7.48□□□□□ -1.21
BRCA1-221ENST00000493795 EXOSC6Q5RKV6 272 aaKnown RBP7.48□□□□□ -1.21
BRCA1-221ENST00000493795 TREML2Q5T2D2 321 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 MCATQ8IVS2 390 aaKnown RBP7.48□□□□□ -1.21
BRCA1-221ENST00000493795 TEX26Q8N6G2 289 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 IL17RDQ8NFM7 739 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 OR4N2Q8NGD1 307 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 ZNF417Q8TAU3 575 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 NANPQ8TBE9 248 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 THAP3Q8WTV1 239 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-221ENST00000493795 KCNA7Q96RP8 456 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 TRIB3Q96RU7 358 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 MICU1Q9BPX6 476 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 OR51J1Q9H342 316 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms