RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 SOWAHCQ53LP3 525 aaPredicted RBP11.5□□□□□ -0.57
SNX17-208ENST00000493711 GCNT6Q5T4J0 391 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 ATP1A1-AS1Q5TC04 95 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 ABHD17BQ5VST6 288 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 AGAP7PQ5VUJ5 663 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 PRAMEF8Q5VWM4 474 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 PRAMEF7Q5VXH5 474 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 BNC2Q6ZN30 1099 aaPredicted RBP11.5□□□□□ -0.57
SNX17-208ENST00000493711 GPR155Q7Z3F1 870 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 C16orf62Q7Z3J2 963 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 SLC15A3Q8IY34 581 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 DEFB107AQ8IZN7 70 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 SLC34A3Q8N130 599 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 CLEC4FQ8N1N0 589 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 KIF2BQ8N4N8 673 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 SLC16A11Q8NCK7 471 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 XAGE5Q8WWM1 108 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 OIT3Q8WWZ8 545 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 TMEM125Q96AQ2 219 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 C16orf58Q96GQ5 468 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 AGAP4Q96P64 663 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 TRNT1Q96Q11 434 aaKnown RBP11.5□□□□□ -0.57
SNX17-208ENST00000493711 OR7D2Q96RA2 312 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 MMADHCQ9H3L0 296 aaPredicted RBP11.5□□□□□ -0.57
SNX17-208ENST00000493711 TMEM38AQ9H6F2 299 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 HHATLQ9HCP6 504 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 A4GALTQ9NPC4 353 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 TAS2R1Q9NYW7 299 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 TMEM181Q9P2C4 612 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 ABCD2Q9UBJ2 740 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 P2RX2Q9UBL9 471 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 CBLCQ9ULV8 474 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 KCNMB2Q9Y691 235 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 NUP210LQ5VU65 1888 aa11.5□□□□□ -0.57
SNX17-208ENST00000493711 A8MUI8 341 aa11.49□□□□□ -0.57
SNX17-208ENST00000493711 C5orf58C9J3I9 102 aa11.49□□□□□ -0.57
SNX17-208ENST00000493711 HMGN4O00479 90 aa11.49□□□□□ -0.57
SNX17-208ENST00000493711 RRP9O43818 475 aaKnown RBP11.49□□□□□ -0.57
SNX17-208ENST00000493711 TNFRSF21O75509 655 aa11.49□□□□□ -0.57
SNX17-208ENST00000493711 CT45A8P0DMV1 189 aa11.49□□□□□ -0.57
SNX17-208ENST00000493711 CT45A9P0DMV2 189 aa11.49□□□□□ -0.57
SNX17-208ENST00000493711 NR2F1P10589 423 aa11.49□□□□□ -0.57
SNX17-208ENST00000493711 ATP6V1C1P21283 382 aa11.49□□□□□ -0.57
SNX17-208ENST00000493711 PIGAP37287 484 aa11.49□□□□□ -0.57
SNX17-208ENST00000493711 CASRP41180 1078 aa11.49□□□□□ -0.57
SNX17-208ENST00000493711 SSR4P51571 173 aa11.49□□□□□ -0.57
SNX17-208ENST00000493711 NR0B1P51843 470 aaKnown RBP11.49□□□□□ -0.57
SNX17-208ENST00000493711 RPP38P78345 283 aaKnown RBP11.49□□□□□ -0.57
SNX17-208ENST00000493711 HPCAP84074 193 aa11.49□□□□□ -0.57
SNX17-208ENST00000493711 EFR3AQ14156 821 aa11.49□□□□□ -0.57
SNX17-208ENST00000493711 ZSCAN26Q16670 478 aa11.49□□□□□ -0.57
SNX17-208ENST00000493711 DUSP5Q16690 384 aa11.49□□□□□ -0.57
SNX17-208ENST00000493711 ARHGAP11BQ3KRB8 267 aa11.49□□□□□ -0.57
SNX17-208ENST00000493711 CT45A2Q5DJT8 189 aa11.49□□□□□ -0.57
SNX17-208ENST00000493711 RABL3Q5HYI8 236 aa11.49□□□□□ -0.57
SNX17-208ENST00000493711 ACER2Q5QJU3 275 aa11.49□□□□□ -0.57
SNX17-208ENST00000493711 INTS11Q5TA45 600 aaKnown RBP11.49□□□□□ -0.57
SNX17-208ENST00000493711 AP1ARQ63HQ0 302 aa11.49□□□□□ -0.57
SNX17-208ENST00000493711 HEPHL1Q6MZM0 1159 aa11.49□□□□□ -0.57
SNX17-208ENST00000493711 TCTN3Q6NUS6 607 aa11.49□□□□□ -0.57
SNX17-208ENST00000493711 TNFAIP8L2Q6P589 184 aaPredicted RBP11.49□□□□□ -0.57
SNX17-208ENST00000493711 BORAQ6PGQ7 559 aa11.49□□□□□ -0.57
SNX17-208ENST00000493711 RINLQ6ZS11 566 aa11.49□□□□□ -0.57
SNX17-208ENST00000493711 NET1Q7Z628 596 aaPredicted RBP11.49□□□□□ -0.57
SNX17-208ENST00000493711 HORMAD2Q8N7B1 307 aa11.49□□□□□ -0.57
SNX17-208ENST00000493711 C11orf65Q8NCR3 313 aa11.49□□□□□ -0.57
SNX17-208ENST00000493711 SIMC1Q8NDZ2 872 aa11.49□□□□□ -0.57
SNX17-208ENST00000493711 CHDHQ8NE62 594 aaPredicted RBP11.49□□□□□ -0.57
SNX17-208ENST00000493711 PNPT1Q8TCS8 783 aaKnown RBP11.49□□□□□ -0.57
SNX17-208ENST00000493711 SLC35A4Q96G79 324 aa11.49□□□□□ -0.57
SNX17-208ENST00000493711 REXO5Q96IC2 774 aaKnown RBP11.49□□□□□ -0.57
SNX17-208ENST00000493711 LMF1Q96S06 567 aa11.49□□□□□ -0.57
SNX17-208ENST00000493711 SLC39A3Q9BRY0 314 aa11.49□□□□□ -0.57
SNX17-208ENST00000493711 YIPF4Q9BSR8 244 aa11.49□□□□□ -0.57
SNX17-208ENST00000493711 NXF5Q9H1B4 397 aaKnown RBP11.49□□□□□ -0.57
SNX17-208ENST00000493711 LRMDAQ9H2I8 198 aa11.49□□□□□ -0.57
SNX17-208ENST00000493711 ADA2Q9NZK5 511 aa11.49□□□□□ -0.57
SNX17-208ENST00000493711 PCDHGB7Q9Y5F8 929 aa11.49□□□□□ -0.57
SNX17-208ENST00000493711 TMEM200CA6NKL6 621 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 A8MVJ9 347 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 FAM220BPB1ANY3 271 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 HS6ST1O60243 411 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 GMNNO75496 209 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 CEACAM4O75871 244 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 DNAJC8O75937 253 aaPredicted RBP11.48□□□□□ -0.57
SNX17-208ENST00000493711 ZIC2O95409 532 aaPredicted RBP11.48□□□□□ -0.57
SNX17-208ENST00000493711 IL33O95760 270 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 OR12D1P0DN82 309 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 ETFAP13804 333 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 HSD17B1P14061 328 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 SOX11P35716 441 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 CRISP3P54108 245 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 PNLIPRP2P54317 469 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 CORO7P57737 925 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 RPS26P62854 115 aaKnown RBP11.48□□□□□ -0.57
SNX17-208ENST00000493711 LIPEQ05469 1076 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 PLCXD2Q0VAA5 305 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 VEZF1Q14119 521 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.48□□□□□ -0.57
SNX17-208ENST00000493711 COX20Q5RI15 118 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms