RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 DECR1Q16698 335 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 PGS1Q32NB8 556 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 VPS26BQ4G0F5 336 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 ZNF385BQ569K4 471 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 WLSQ5T9L3 541 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 BICRALQ6AI39 1079 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 ZNF585AQ6P3V2 769 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 ZCCHC12Q6PEW1 402 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 MAMDC2Q7Z304 686 aaPredicted RBP6.39□□□□□ -1.39
TOP3A-207ENST00000493648 SZRD1Q7Z422 152 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 FGD2Q7Z6J4 655 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 MRGPRGQ86SM5 289 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 CD163Q86VB7 1156 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 CHERPQ8IWX8 916 aaKnown RBP6.39□□□□□ -1.39
TOP3A-207ENST00000493648 ZNF808Q8N4W9 903 aaPredicted RBP6.39□□□□□ -1.39
TOP3A-207ENST00000493648 CDRT4Q8N9R6 151 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 VPS37AQ8NEZ2 397 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 NUP43Q8NFH3 380 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 OR7A2PQ8NGA2 310 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 NEIL3Q8TAT5 605 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 GPR151Q8TDV0 419 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 PHF10Q8WUB8 498 aaKnown RBP6.39□□□□□ -1.39
TOP3A-207ENST00000493648 OR5P2Q8WZ92 322 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 COQ8BQ96D53 544 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 CCDC120Q96HB5 630 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 ATP6V1G3Q96LB4 118 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 GNRHR2Q96P88 292 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 NODALQ96S42 347 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 LMF2Q9BU23 707 aaKnown RBP6.39□□□□□ -1.39
TOP3A-207ENST00000493648 OSBPL11Q9BXB4 747 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 NUF2Q9BZD4 464 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 BHLHE41Q9C0J9 482 aaPredicted RBP6.39□□□□□ -1.39
TOP3A-207ENST00000493648 ZNF703Q9H7S9 590 aaPredicted RBP6.39□□□□□ -1.39
TOP3A-207ENST00000493648 MEAF6Q9HAF1 191 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 SDHAF3Q9NRP4 125 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 PNPOQ9NVS9 261 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 ALKBH4Q9NXW9 302 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 ASIC5Q9NY37 505 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 NTMQ9P121 344 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 CBLCQ9ULV8 474 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 PCDHGB4Q9UN71 923 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 DIDO1Q9BTC0 2240 aaKnown RBP6.39□□□□□ -1.39
TOP3A-207ENST00000493648 EXPH5Q8NEV8 1989 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 FLNCQ14315 2725 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 C2orf72A6NCS6 295 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 PRAMEF25A6NGN4 478 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 LRRC3CA6NJW4 275 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 FIGNL2A6NMB9 653 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 HDAC3O15379 428 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 CFLARO15519 480 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 SNNO75324 88 aaPredicted RBP6.38□□□□□ -1.39
TOP3A-207ENST00000493648 PSMG1O95456 288 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 CLDN1O95832 211 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 HPNP05981 417 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 HOXD4P09016 255 aaPredicted RBP6.38□□□□□ -1.39
TOP3A-207ENST00000493648 CELA3AP09093 270 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 ALOX5P09917 674 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 KITP10721 976 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 CYP4B1P13584 511 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 EFNA1P20827 205 aaPredicted RBP6.38□□□□□ -1.39
TOP3A-207ENST00000493648 AGAP20933 346 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 PTPN6P29350 595 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 PTGDSP41222 190 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 TRPC1P48995 793 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 CCT3P49368 545 aaKnown RBP6.38□□□□□ -1.39
TOP3A-207ENST00000493648 PRIM2P49643 509 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 CDK9P50750 372 aaKnown RBP6.38□□□□□ -1.39
TOP3A-207ENST00000493648 C21orf58P58505 322 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 ART3Q13508 389 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 SF3B4Q15427 424 aaKnown RBP eCLIP6.38□□□□□ -1.39
TOP3A-207ENST00000493648 SPDYE7PQ495Y7 208 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 TIGD3Q6B0B8 471 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 DESI1Q6ICB0 168 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 BHLHB9Q6PI77 547 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 ANGPTL8Q6UXH0 198 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 NPSR1Q6W5P4 371 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 C3P1Q6ZMU1 363 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 ACAD11Q709F0 780 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 SPATA19Q7Z5L4 167 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 RIMKLAQ8IXN7 391 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 KRTCAP2Q8N6L1 136 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 WDSUB1Q8N9V3 476 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 OR4N2Q8NGD1 307 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 SLC9A6Q92581 669 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 ZNF75CPQ92670 426 aaPredicted RBP6.38□□□□□ -1.39
TOP3A-207ENST00000493648 ARL8AQ96BM9 186 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 EFHD2Q96C19 240 aaPredicted RBP6.38□□□□□ -1.39
TOP3A-207ENST00000493648 MS4A4EQ96PG1 132 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 DUSP26Q9BV47 211 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 DPY30Q9C005 99 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 VIPAS39Q9H9C1 493 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 HHATLQ9HCP6 504 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 EQTNQ9NQ60 294 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 ZCCHC3Q9NUD5 404 aaKnown RBP6.38□□□□□ -1.39
TOP3A-207ENST00000493648 COQ3Q9NZJ6 369 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 C15orf41Q9Y2V0 281 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 KLF2Q9Y5W3 355 aaPredicted RBP6.38□□□□□ -1.39
TOP3A-207ENST00000493648 SNX8Q9Y5X2 465 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 LIPGQ9Y5X9 500 aa6.38□□□□□ -1.39
TOP3A-207ENST00000493648 FREM3P0C091 2139 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms