RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 TMBIM6P55061 237 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 NXPH1P58417 271 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 RPP38P78345 283 aaKnown RBP9.38□□□□□ -0.91
PRPF3-206ENST00000493553 LASP1Q14847 261 aaKnown RBP9.38□□□□□ -0.91
PRPF3-206ENST00000493553 DCST1Q5T197 706 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 FOXB2Q5VYV0 432 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 CD300LDQ6UXZ3 194 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 ZNF605Q86T29 641 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 CDH24Q86UP0 819 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 C17orf82Q86X59 251 aaPredicted RBP9.38□□□□□ -0.91
PRPF3-206ENST00000493553 SLC44A2Q8IWA5 706 aaPredicted RBP9.38□□□□□ -0.91
PRPF3-206ENST00000493553 PEX5LQ8IYB4 626 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 ZNF595Q8IYB9 648 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 CDRT4Q8N9R6 151 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 OR6C4Q8NGE1 309 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 LMX1AQ8TE12 382 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 DNASE2BQ8WZ79 361 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 MYDGFQ969H8 173 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 C10orf90Q96M02 699 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 Q96MT0 163 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 STACQ99469 402 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 FEVQ99581 238 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 NRTNQ99748 197 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 ORAI3Q9BRQ5 295 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 FNDC11Q9BVV2 318 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 DGCR6LQ9BY27 220 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 PRRG3Q9BZD7 231 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 RBM38Q9H0Z9 239 aaKnown RBP9.38□□□□□ -0.91
PRPF3-206ENST00000493553 DUSP15Q9H1R2 295 aaPredicted RBP9.38□□□□□ -0.91
PRPF3-206ENST00000493553 POLR1BQ9H9Y6 1135 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 CXorf21Q9HAI6 301 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 CD93Q9NPY3 652 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 DUSP22Q9NRW4 184 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 ACER3Q9NUN7 267 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 IMPAD1Q9NX62 359 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 VNN3Q9NY84 501 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 ACAD8Q9UKU7 415 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 PLCL2Q9UPR0 1127 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 KLHL20Q9Y2M5 609 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 NAALAD2Q9Y3Q0 740 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 PCDHGB5Q9Y5G0 923 aa9.38□□□□□ -0.91
PRPF3-206ENST00000493553 MAGED1Q9Y5V3 778 aaPredicted RBP9.38□□□□□ -0.91
PRPF3-206ENST00000493553 GLOD5A6NK44 160 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 WASHC1A8K0Z3 465 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 B4DGG1 531 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 E9PQ18 207 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 SLC1A7O00341 560 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 PRAMEF10O60809 474 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 CBX7O95931 251 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 LGI1O95970 557 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 EIF2S1P05198 315 aaKnown RBP9.37□□□□□ -0.91
PRPF3-206ENST00000493553 ALOX5P09917 674 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 SLC35E2P0CK97 266 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 FOSL2P15408 326 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 GALNSP34059 522 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 GPR3P46089 330 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 AVPR1BP47901 424 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 PRKAG1P54619 331 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 VSX2P58304 361 aaPredicted RBP9.37□□□□□ -0.91
PRPF3-206ENST00000493553 IL1RL1Q01638 556 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 ROR2Q01974 943 aaKnown RBP9.37□□□□□ -0.91
PRPF3-206ENST00000493553 FZD5Q13467 585 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 MAD2L1BPQ15013 274 aaPredicted RBP9.37□□□□□ -0.91
PRPF3-206ENST00000493553 ZNHIT3Q15649 155 aaPredicted RBP9.37□□□□□ -0.91
PRPF3-206ENST00000493553 EXOC3L2Q2M3D2 409 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 PRTGQ2VWP7 1150 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 GPAT3Q53EU6 434 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 TMEM31Q5JXX7 168 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 SNAP47Q5SQN1 464 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 YOD1Q5VVQ6 348 aaPredicted RBP9.37□□□□□ -0.91
PRPF3-206ENST00000493553 AP1ARQ63HQ0 302 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 C18orf63Q68DL7 685 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 HEPHL1Q6MZM0 1159 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 MFSD12Q6NUT3 480 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 TMEM107Q6UX40 140 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 KCTD8Q6ZWB6 473 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 GALNT5Q7Z7M9 940 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 GALNT10Q86SR1 603 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 KMT5CQ86Y97 462 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 HS3ST5Q8IZT8 346 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 ARL14Q8N4G2 192 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 SLC5A8Q8N695 610 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 AMER3Q8N944 861 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 SMYD1Q8NB12 490 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 OR10Q1Q8NGQ4 319 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 ZCCHC10Q8TBK6 192 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 RAB2BQ8WUD1 216 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 APOBEC4Q8WW27 367 aaKnown RBP9.37□□□□□ -0.91
PRPF3-206ENST00000493553 JPH3Q8WXH2 748 aaPredicted RBP9.37□□□□□ -0.91
PRPF3-206ENST00000493553 RAB8BQ92930 207 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 SLC38A4Q969I6 547 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 SLC35B4Q969S0 331 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 PRRC1Q96M27 445 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 OR7D2Q96RA2 312 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 UCK2Q9BZX2 261 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 PIGUQ9H490 435 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 DUSP21Q9H596 190 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 TBC1D17Q9HA65 648 aa9.37□□□□□ -0.91
PRPF3-206ENST00000493553 NMNAT1Q9HAN9 279 aaPredicted RBP9.37□□□□□ -0.91
PRPF3-206ENST00000493553 C5AR2Q9P296 337 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms