RNA–Protein interactions for RNA: ENST00000493521.5

SOX2-OT-215, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 1,239 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-215ENST00000493521 FAM156AQ8NDB6 213 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 NRGNQ92686 78 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 GAL3ST3Q96A11 431 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 PPCDCQ96CD2 204 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 COQ8BQ96D53 544 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 KCNC2Q96PR1 638 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 MAPKAP1Q9BPZ7 522 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 BHLHE41Q9C0J9 482 aaPredicted RBP9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 PAIP1Q9H074 479 aaKnown RBP9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 DEFB127Q9H1M4 99 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 NPDC1Q9NQX5 325 aaPredicted RBP9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 VAPAQ9P0L0 249 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 CD300AQ9UGN4 299 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 FBXW2Q9UKT8 454 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 WBP11Q9Y2W2 641 aaKnown RBP9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 L3MBTL1Q9Y468 752 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 ZNF407Q9C0G0 2248 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 HCFC1P51610 2035 aa9.43□□□□□ -0.9
SOX2-OT-215ENST00000493521 TRBV5-3A0A0A0MS03 114 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 C15orf38-AP3S2A0A0A6YYH1 394 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 PRSS51A0A1B0GVH4 220 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 A0A1W2PS29 197 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 URADA6NGE7 173 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 FAM166BA8MTA8 275 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 WWP2O00308 870 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 RFXANKO14593 260 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 PEX1O43933 1283 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 LDB3O75112 727 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 ERN1O75460 977 aaKnown RBP9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 OR2J2O76002 312 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 CLDN14O95500 239 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 ANP32DO95626 131 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 GSNP06396 782 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 FAM58BPP0C7Q3 252 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 COX6B1P14854 86 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 DDCP20711 480 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 HIST1H1TP22492 207 aaPredicted RBP9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 ATP5A1P25705 553 aaKnown RBP9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 ELAVL4P26378 380 aaKnown RBP9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 SOX3P41225 446 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 ALDH9A1P49189 494 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 ERFP50548 548 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 LIM2P55344 173 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 RAB38P57729 211 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 MTPNP58546 118 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 ACTR3P61158 418 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 MS4A2Q01362 244 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 RBPJQ06330 500 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 SLAMF1Q13291 335 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 HEPACAMQ14CZ8 416 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 RUNDC3AQ59EK9 446 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 LRIF1Q5T3J3 769 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 ANXA8L1Q5VT79 327 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 MRM1Q6IN84 353 aaKnown RBP9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 ARPINQ7Z6K5 226 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 OR4N5Q8IXE1 308 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 MSRB3Q8IXL7 192 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 ARMC10Q8N2F6 343 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 ZCCHC7Q8N3Z6 543 aaKnown RBP9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 TMEM178AQ8NBL3 297 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 ACBD4Q8NC06 268 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 B3GNT7Q8NFL0 401 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 OR8J3Q8NGG0 315 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 PTPMT1Q8WUK0 201 aaPredicted RBP9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 SDCCAG3Q96C92 435 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 MTERF3Q96E29 417 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 ANKRD27Q96NW4 1050 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 DEFB126Q9BYW3 111 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 COPS7BQ9H9Q2 264 aaPredicted RBP9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 MIEF1Q9NQG6 463 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 PRTFDC1Q9NRG1 225 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 SLC6A13Q9NSD5 602 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 ATAD3AQ9NVI7 634 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 TEX10Q9NXF1 929 aaPredicted RBP9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 SLC25A37Q9NYZ2 338 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 BTNL2Q9UIR0 455 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 PCDHB14Q9Y5E9 798 aa9.42□□□□□ -0.9
SOX2-OT-215ENST00000493521 FAM90A27PA6NNH2 459 aa9.41□□□□□ -0.9
SOX2-OT-215ENST00000493521 KDM4EB2RXH2 506 aaPredicted RBP9.41□□□□□ -0.9
SOX2-OT-215ENST00000493521 RNASET2O00584 256 aaKnown RBP9.41□□□□□ -0.9
SOX2-OT-215ENST00000493521 TBX19O60806 448 aa9.41□□□□□ -0.9
SOX2-OT-215ENST00000493521 SCELO95171 688 aa9.41□□□□□ -0.9
SOX2-OT-215ENST00000493521 HOXB9P17482 250 aaPredicted RBP9.41□□□□□ -0.9
SOX2-OT-215ENST00000493521 IL10P22301 178 aa9.41□□□□□ -0.9
SOX2-OT-215ENST00000493521 PTPN6P29350 595 aa9.41□□□□□ -0.9
SOX2-OT-215ENST00000493521 TRPC1P48995 793 aa9.41□□□□□ -0.9
SOX2-OT-215ENST00000493521 GSK3BP49841 420 aa9.41□□□□□ -0.9
SOX2-OT-215ENST00000493521 EEFSECP57772 596 aaKnown RBP9.41□□□□□ -0.9
SOX2-OT-215ENST00000493521 AP2B1P63010 937 aa9.41□□□□□ -0.9
SOX2-OT-215ENST00000493521 LIPEQ05469 1076 aa9.41□□□□□ -0.9
SOX2-OT-215ENST00000493521 TFF3Q07654 80 aa9.41□□□□□ -0.9
SOX2-OT-215ENST00000493521 CCNIQ14094 377 aa9.41□□□□□ -0.9
SOX2-OT-215ENST00000493521 FLOT2Q14254 428 aa9.41□□□□□ -0.9
SOX2-OT-215ENST00000493521 TRIM25Q14258 630 aaKnown RBP9.41□□□□□ -0.9
SOX2-OT-215ENST00000493521 MPEG1Q2M385 716 aa9.41□□□□□ -0.9
SOX2-OT-215ENST00000493521 KRTCAP3Q53RY4 240 aa9.41□□□□□ -0.9
SOX2-OT-215ENST00000493521 XKRXQ6PP77 449 aa9.41□□□□□ -0.9
SOX2-OT-215ENST00000493521 IL20RBQ6UXL0 311 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms