RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 KRTAP13-3Q3SY46 172 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 TMEM52BQ4KMG9 183 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 ANKRD20A8PQ5CZ79 823 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 TCTEX1D4Q5JR98 221 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 ERMARDQ5T6L9 678 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 FAM46CQ5VWP2 391 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 FAM219BQ5XKK7 198 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 SPECC1LQ69YQ0 1117 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 RAET1GQ6H3X3 334 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 ALKBH5Q6P6C2 394 aaKnown RBP2.71□□□□□ -1.98
PTCD3-218ENST00000493430 INO80CQ6PI98 192 aaPredicted RBP2.71□□□□□ -1.98
PTCD3-218ENST00000493430 TMCO3Q6UWJ1 677 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 MACC1Q6ZN28 852 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 DET1Q7L5Y6 550 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 TAF8Q7Z7C8 310 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 GLRX5Q86SX6 157 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 SETD3Q86TU7 594 aaPredicted RBP2.71□□□□□ -1.98
PTCD3-218ENST00000493430 CCDC190Q86UF4 302 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 PARGQ86W56 976 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 ZNF677Q86XU0 584 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 UMODL1-AS1Q8N2C9 162 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 GPR26Q8NDV2 337 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 MAPK15Q8TD08 544 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 CXorf40AQ8TE69 158 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 SLC37A2Q8TED4 501 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 PIH1D2Q8WWB5 315 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 SGCDQ92629 289 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 ERP27Q96DN0 273 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 NUS1Q96E22 293 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 ELMO2Q96JJ3 720 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 APOOQ9BUR5 198 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 MLPHQ9BV36 600 aaPredicted RBP2.71□□□□□ -1.98
PTCD3-218ENST00000493430 RIOK2Q9BVS4 552 aaKnown RBP2.71□□□□□ -1.98
PTCD3-218ENST00000493430 SEMA6AQ9H2E6 1030 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 PELI2Q9HAT8 420 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 PREBQ9HCU5 417 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 SLC23A2Q9UGH3 650 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 PSMD13Q9UNM6 376 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 GPR34Q9UPC5 381 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 RUVBL2Q9Y230 463 aaKnown RBP2.71□□□□□ -1.98
PTCD3-218ENST00000493430 R3HDM2Q9Y2K5 976 aaKnown RBP2.71□□□□□ -1.98
PTCD3-218ENST00000493430 CSAG2Q9Y5P2 127 aa2.71□□□□□ -1.98
PTCD3-218ENST00000493430 PHF3Q92576 2039 aaKnown RBP2.7□□□□□ -1.98
PTCD3-218ENST00000493430 IGHV4-61A0A0C4DH41 118 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 C1orf232A0A0U1RR37 186 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 OR2M5A3KFT3 312 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 OR2AG2A6NM03 316 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 OR6C76A6NM76 312 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 OR52A4PA6NMU1 304 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 MAP2K7O14733 419 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 ALOX15BO15296 676 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 SLC7A4O43246 635 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 HCRTR1O43613 425 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 PLPP2O43688 288 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 UGT1A9O60656 530 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 PROSCO94903 275 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 TNFSF15O95150 251 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 PGLSO95336 258 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 IGHV4-59P01825 116 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 STATHP02808 62 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 CSF2P04141 144 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 TPM2P07951 284 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 PRKAR1AP10644 381 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 PVRP15151 417 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 CKMT2P17540 419 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 UGT1A6P19224 532 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 CAPN3P20807 821 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 UGT1A4P22310 534 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 F8A1P23610 371 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 KDELR1P24390 212 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 ACP1P24666 158 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 HRH2P25021 359 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 UGT1A3P35503 534 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 UGT1A5P35504 534 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 GARSP41250 739 aaKnown RBP2.7□□□□□ -1.98
PTCD3-218ENST00000493430 ACTR1BP42025 376 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 CCR10P46092 362 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 ARRB1P49407 418 aaPredicted RBP2.7□□□□□ -1.98
PTCD3-218ENST00000493430 CSE1LP55060 971 aaKnown RBP2.7□□□□□ -1.98
PTCD3-218ENST00000493430 KRTAP12-2P59991 146 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 SRP54P61011 504 aaKnown RBP2.7□□□□□ -1.98
PTCD3-218ENST00000493430 ACTR1AP61163 376 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 RPS21P63220 83 aaKnown RBP2.7□□□□□ -1.98
PTCD3-218ENST00000493430 CDK3Q00526 305 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 BCL2L1Q07817 233 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 IL10RBQ08334 325 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 AP1B1Q10567 949 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 WASHC5Q12768 1159 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 SGCGQ13326 291 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 ADIPOQQ15848 244 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 DPYSL2Q16555 572 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 ASTE1Q2TB18 679 aaPredicted RBP2.7□□□□□ -1.98
PTCD3-218ENST00000493430 PRR30Q53SZ7 412 aaPredicted RBP2.7□□□□□ -1.98
PTCD3-218ENST00000493430 SPDYCQ5MJ68 293 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 CFAP58Q5T655 872 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 ZNF774Q6NX45 483 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 FAM180BQ6P0A1 224 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 FAM151BQ6UXP7 276 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 Q6ZSR9 355 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 SLC16A9Q7RTY1 509 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms