RNA–Protein interactions for RNA: ENST00000492816.6

FN1-224, Transcript of fibronectin 1, humanhuman

TSL 5

Gene FN1, Length 9,171 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-224ENST00000492816 COL20A1Q9P218 1284 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 PDP2Q9P2J9 529 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 MMP17Q9ULZ9 603 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 RRP15Q9Y3B9 282 aaKnown RBP5.11□□□□□ -1.59
FN1-224ENST00000492816 EGFP01133 1207 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 ZNF44P15621 663 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 CDK2P24941 298 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 GABRB2P47870 512 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 ERVPABLB-1P60509 514 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 ACTC1P68032 377 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 ACTA1P68133 377 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 SIRPB2Q5JXA9 342 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 TMEM240Q5SV17 173 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 ZNF595Q8IYB9 648 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 C19orf47Q8N9M1 422 aaKnown RBP5.11□□□□□ -1.59
FN1-224ENST00000492816 OR51D1Q8NGF3 324 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 OR2T4Q8NH00 348 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 M1APQ8TC57 530 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 PSMF1Q92530 271 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 OXNAD1Q96HP4 312 aaPredicted RBP5.11□□□□□ -1.59
FN1-224ENST00000492816 TMED9Q9BVK6 235 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 ZFP57Q9NU63 452 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 OR14J1Q9UGF5 321 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.11□□□□□ -1.59
FN1-224ENST00000492816 MAGEA13PA6NCF6 341 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 SLC19A2O60779 497 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 ENTPD6O75354 484 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 ZNF865P0CJ78 1059 aaPredicted RBP5.11□□□□□ -1.59
FN1-224ENST00000492816 SPATA31C1P0DKV0 1188 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 ANXA8P13928 327 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 FAHP16930 419 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 PSMA6P60900 246 aaKnown RBP5.11□□□□□ -1.59
FN1-224ENST00000492816 NFATC3Q12968 1075 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 MSMO1Q15800 293 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 DEFB110Q30KQ9 67 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 ZNF765Q7L2R6 523 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 TECPR1Q7Z6L1 1165 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 PRR18Q8N4B5 295 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 SPERTQ8NA61 448 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 UNKLQ9H9P5 680 aaKnown RBP5.11□□□□□ -1.59
FN1-224ENST00000492816 MEPEQ9NQ76 525 aaPredicted RBP5.11□□□□□ -1.59
FN1-224ENST00000492816 OR6C2Q9NZP2 312 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 KCTD3Q9Y597 815 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 HNRNPLP14866 589 aaKnown RBP eCLIP5.11□□□□□ -1.598e-8■■□□□ 12.3
FN1-224ENST00000492816 FABP6P51161 128 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 ART1P52961 327 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 AIMP2Q13155 320 aaKnown RBP5.11□□□□□ -1.59
FN1-224ENST00000492816 IHHQ14623 411 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 IRF4Q15306 451 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 FAM131AQ6UXB0 335 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 TRIM46Q7Z4K8 759 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 TMEM25Q86YD3 366 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 OR5V1Q9UGF6 321 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 MGAT4BQ9UQ53 548 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 ZNF785A8K8V0 405 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 ZNF182P17025 639 aaPredicted RBP5.11□□□□□ -1.59
FN1-224ENST00000492816 GPR176Q14439 515 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 SF3A2Q15428 464 aaKnown RBP5.11□□□□□ -1.59
FN1-224ENST00000492816 ATP6AP1Q15904 470 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 SOWAHAQ2M3V2 549 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 LRFN4Q6PJG9 635 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 ZNF554Q86TJ5 538 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 MEX3DQ86XN8 651 aaKnown RBP5.11□□□□□ -1.59
FN1-224ENST00000492816 MREGQ8N565 214 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 FGF11Q92914 225 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 RAB1CQ92928 201 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 KISS1RQ969F8 398 aaPredicted RBP5.11□□□□□ -1.59
FN1-224ENST00000492816 FGGYQ96C11 551 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 MRI1Q9BV20 369 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 DGCR6LQ9BY27 220 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 PITHD1Q9GZP4 211 aaPredicted RBP5.11□□□□□ -1.59
FN1-224ENST00000492816 TXNRD2Q9NNW7 524 aa5.11□□□□□ -1.59
FN1-224ENST00000492816 ZNF71Q9NQZ8 489 aaPredicted RBP5.11□□□□□ -1.59
FN1-224ENST00000492816 FAM120CQ9NX05 1096 aaKnown RBP5.11□□□□□ -1.59
FN1-224ENST00000492816 A0A0G2JPF8 293 aa5.1□□□□□ -1.59
FN1-224ENST00000492816 AGAP5A6NIR3 686 aa5.1□□□□□ -1.59
FN1-224ENST00000492816 CENPBD1B2RD01 187 aa5.1□□□□□ -1.59
FN1-224ENST00000492816 HNRNPCL3B7ZW38 293 aa5.1□□□□□ -1.59
FN1-224ENST00000492816 IFNA10P01566 189 aa5.1□□□□□ -1.59
FN1-224ENST00000492816 F7P08709 466 aaPredicted RBP5.1□□□□□ -1.59
FN1-224ENST00000492816 HNRNPCL4P0DMR1 293 aa5.1□□□□□ -1.59
FN1-224ENST00000492816 SNCAP37840 140 aa5.1□□□□□ -1.59
FN1-224ENST00000492816 ASPAP45381 313 aa5.1□□□□□ -1.59
FN1-224ENST00000492816 FMR1Q06787 632 aaKnown RBP eCLIP5.1□□□□□ -1.59
FN1-224ENST00000492816 LRIT3Q3SXY7 679 aa5.1□□□□□ -1.59
FN1-224ENST00000492816 SLC27A4Q6P1M0 643 aa5.1□□□□□ -1.59
FN1-224ENST00000492816 ERI1Q8IV48 349 aaKnown RBP5.1□□□□□ -1.59
FN1-224ENST00000492816 SVOPLQ8N434 492 aa5.1□□□□□ -1.59
FN1-224ENST00000492816 SHKBP1Q8TBC3 707 aa5.1□□□□□ -1.59
FN1-224ENST00000492816 EPS8L3Q8TE67 593 aaKnown RBP5.1□□□□□ -1.59
FN1-224ENST00000492816 S100ZQ8WXG8 99 aa5.1□□□□□ -1.59
FN1-224ENST00000492816 SPOCK2Q92563 424 aa5.1□□□□□ -1.59
FN1-224ENST00000492816 DNAJA3Q96EY1 480 aa5.1□□□□□ -1.59
FN1-224ENST00000492816 RXFP3Q9NSD7 469 aa5.1□□□□□ -1.59
FN1-224ENST00000492816 GNG12Q9UBI6 72 aa5.1□□□□□ -1.59
FN1-224ENST00000492816 CLEC4EQ9ULY5 219 aa5.1□□□□□ -1.59
FN1-224ENST00000492816 PCDHGA5Q9Y5G8 931 aa5.1□□□□□ -1.59
FN1-224ENST00000492816 C9IYK1 514 aa5.1□□□□□ -1.59
FN1-224ENST00000492816 TP73O15350 636 aa5.1□□□□□ -1.59
FN1-224ENST00000492816 SPINT2O43291 252 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms