RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 EMCNQ9ULC0 261 aa16.7■□□□□ 0.26
SMIM4-205ENST00000491607 RPH3AQ9Y2J0 694 aaPredicted RBP16.7■□□□□ 0.26
SMIM4-205ENST00000491607 POLR3HQ9Y535 204 aaPredicted RBP16.7■□□□□ 0.26
SMIM4-205ENST00000491607 HIVEP1P15822 2718 aa16.69■□□□□ 0.26
SMIM4-205ENST00000491607 SERTM1A2A2V5 107 aa16.69■□□□□ 0.26
SMIM4-205ENST00000491607 CLCA1A8K7I4 914 aa16.69■□□□□ 0.26
SMIM4-205ENST00000491607 COQ9O75208 318 aa16.69■□□□□ 0.26
SMIM4-205ENST00000491607 IL18BPO95998 194 aa16.69■□□□□ 0.26
SMIM4-205ENST00000491607 GRK2P25098 689 aa16.69■□□□□ 0.26
SMIM4-205ENST00000491607 MC3RP41968 323 aa16.69■□□□□ 0.26
SMIM4-205ENST00000491607 PNLIPRP2P54317 469 aa16.69■□□□□ 0.26
SMIM4-205ENST00000491607 MRPS22P82650 360 aaKnown RBP16.69■□□□□ 0.26
SMIM4-205ENST00000491607 CFAP157Q5JU67 520 aa16.69■□□□□ 0.26
SMIM4-205ENST00000491607 TMEM107Q6UX40 140 aa16.69■□□□□ 0.26
SMIM4-205ENST00000491607 LUZP2Q86TE4 346 aa16.69■□□□□ 0.26
SMIM4-205ENST00000491607 CDC20BQ86Y33 519 aa16.69■□□□□ 0.26
SMIM4-205ENST00000491607 CNPY4Q8N129 248 aa16.69■□□□□ 0.26
SMIM4-205ENST00000491607 INTS12Q96CB8 462 aaKnown RBP16.69■□□□□ 0.26
SMIM4-205ENST00000491607 TM9SF2Q99805 663 aa16.69■□□□□ 0.26
SMIM4-205ENST00000491607 TXLNGYQ9BZA5 131 aa16.69■□□□□ 0.26
SMIM4-205ENST00000491607 SHCBP1LQ9BZQ2 653 aa16.69■□□□□ 0.26
SMIM4-205ENST00000491607 SIRT5Q9NXA8 310 aa16.69■□□□□ 0.26
SMIM4-205ENST00000491607 EDARQ9UNE0 448 aa16.69■□□□□ 0.26
SMIM4-205ENST00000491607 PLEKHA6Q9Y2H5 1048 aa16.69■□□□□ 0.26
SMIM4-205ENST00000491607 KIAA1549Q9HCM3 1950 aa16.69■□□□□ 0.26
SMIM4-205ENST00000491607 FAM221AA4D161 298 aa16.68■□□□□ 0.26
SMIM4-205ENST00000491607 MYO1GB0I1T2 1018 aa16.68■□□□□ 0.26
SMIM4-205ENST00000491607 SCO2O43819 266 aa16.68■□□□□ 0.26
SMIM4-205ENST00000491607 FREM3P0C091 2139 aa16.68■□□□□ 0.26
SMIM4-205ENST00000491607 DNASE1P24855 282 aa16.68■□□□□ 0.26
SMIM4-205ENST00000491607 DPP4P27487 766 aa16.68■□□□□ 0.26
SMIM4-205ENST00000491607 NTSP30990 170 aa16.68■□□□□ 0.26
SMIM4-205ENST00000491607 CPA2P48052 419 aa16.68■□□□□ 0.26
SMIM4-205ENST00000491607 LHX2P50458 406 aa16.68■□□□□ 0.26
SMIM4-205ENST00000491607 PRSS53Q2L4Q9 553 aa16.68■□□□□ 0.26
SMIM4-205ENST00000491607 GCNT2Q8N0V5 402 aa16.68■□□□□ 0.26
SMIM4-205ENST00000491607 CCDC63Q8NA47 563 aa16.68■□□□□ 0.26
SMIM4-205ENST00000491607 OR4K17Q8NGC6 315 aa16.68■□□□□ 0.26
SMIM4-205ENST00000491607 LINC01560Q8TB33 94 aa16.68■□□□□ 0.26
SMIM4-205ENST00000491607 FOXC2Q99958 501 aa16.68■□□□□ 0.26
SMIM4-205ENST00000491607 SFXN3Q9BWM7 321 aa16.68■□□□□ 0.26
SMIM4-205ENST00000491607 RBM24Q9BX46 236 aaKnown RBP16.68■□□□□ 0.26
SMIM4-205ENST00000491607 JKAMPQ9P055 326 aa16.68■□□□□ 0.26
SMIM4-205ENST00000491607 PPP4R1LQ9P1A2 415 aa16.68■□□□□ 0.26
SMIM4-205ENST00000491607 SMIM23A6NLE4 172 aa16.67■□□□□ 0.26
SMIM4-205ENST00000491607 C17orf51A8MQB3 221 aa16.67■□□□□ 0.26
SMIM4-205ENST00000491607 PLOD2O00469 737 aa16.67■□□□□ 0.26
SMIM4-205ENST00000491607 RCBTB2O95199 551 aa16.67■□□□□ 0.26
SMIM4-205ENST00000491607 PROCP04070 461 aa16.67■□□□□ 0.26
SMIM4-205ENST00000491607 EPXP11678 715 aa16.67■□□□□ 0.26
SMIM4-205ENST00000491607 EVI2BP34910 448 aa16.67■□□□□ 0.26
SMIM4-205ENST00000491607 SORDQ00796 357 aa16.67■□□□□ 0.26
SMIM4-205ENST00000491607 PSG6Q00889 435 aa16.67■□□□□ 0.26
SMIM4-205ENST00000491607 DAZAP2Q15038 168 aaPredicted RBP16.67■□□□□ 0.26
SMIM4-205ENST00000491607 FAM71E1Q6IPT2 247 aa16.67■□□□□ 0.26
SMIM4-205ENST00000491607 FRMD7Q6ZUT3 714 aa16.67■□□□□ 0.26
SMIM4-205ENST00000491607 GRAMD2AQ8IUY3 354 aa16.67■□□□□ 0.26
SMIM4-205ENST00000491607 CHDHQ8NE62 594 aaPredicted RBP16.67■□□□□ 0.26
SMIM4-205ENST00000491607 WNT2BQ93097 391 aa16.67■□□□□ 0.26
SMIM4-205ENST00000491607 ZFP3Q96NJ6 502 aa16.67■□□□□ 0.26
SMIM4-205ENST00000491607 G6PC3Q9BUM1 346 aa16.67■□□□□ 0.26
SMIM4-205ENST00000491607 ACBD3Q9H3P7 528 aa16.67■□□□□ 0.26
SMIM4-205ENST00000491607 MYNNQ9NPC7 610 aa16.67■□□□□ 0.26
SMIM4-205ENST00000491607 RRAGDQ9NQL2 400 aaPredicted RBP16.67■□□□□ 0.26
SMIM4-205ENST00000491607 DDX18Q9NVP1 670 aaKnown RBP16.67■□□□□ 0.26
SMIM4-205ENST00000491607 GRID1Q9ULK0 1009 aa16.67■□□□□ 0.26
SMIM4-205ENST00000491607 A0A087WV62 115 aa16.66■□□□□ 0.26
SMIM4-205ENST00000491607 H3BQF6 201 aa16.66■□□□□ 0.26
SMIM4-205ENST00000491607 RSL1D1O76021 490 aaKnown RBP16.66■□□□□ 0.26
SMIM4-205ENST00000491607 SLITRK5O94991 958 aa16.66■□□□□ 0.26
SMIM4-205ENST00000491607 SHBGP04278 402 aa16.66■□□□□ 0.26
SMIM4-205ENST00000491607 ZNF708P17019 499 aa16.66■□□□□ 0.26
SMIM4-205ENST00000491607 CHMP24386 653 aa16.66■□□□□ 0.26
SMIM4-205ENST00000491607 RFX3P48380 749 aa16.66■□□□□ 0.26
SMIM4-205ENST00000491607 CCT5P48643 541 aa16.66■□□□□ 0.26
SMIM4-205ENST00000491607 GAS1P54826 345 aa16.66■□□□□ 0.26
SMIM4-205ENST00000491607 CLDN18P56856 261 aa16.66■□□□□ 0.26
SMIM4-205ENST00000491607 NAA20P61599 178 aa16.66■□□□□ 0.26
SMIM4-205ENST00000491607 STX5Q13190 355 aa16.66■□□□□ 0.26
SMIM4-205ENST00000491607 ZNHIT3Q15649 155 aaPredicted RBP16.66■□□□□ 0.26
SMIM4-205ENST00000491607 CCDC153Q494R4 210 aa16.66■□□□□ 0.26
SMIM4-205ENST00000491607 TRIM46Q7Z4K8 759 aa16.66■□□□□ 0.26
SMIM4-205ENST00000491607 P4HA3Q7Z4N8 544 aa16.66■□□□□ 0.26
SMIM4-205ENST00000491607 ADGRE4PQ86SQ3 457 aa16.66■□□□□ 0.26
SMIM4-205ENST00000491607 UBQLNLQ8IYU4 475 aa16.66■□□□□ 0.26
SMIM4-205ENST00000491607 UBLCP1Q8WVY7 318 aaPredicted RBP16.66■□□□□ 0.26
SMIM4-205ENST00000491607 YIPF4Q9BSR8 244 aa16.66■□□□□ 0.26
SMIM4-205ENST00000491607 DSN1Q9H410 356 aa16.66■□□□□ 0.26
SMIM4-205ENST00000491607 GLIPR2Q9H4G4 154 aa16.66■□□□□ 0.26
SMIM4-205ENST00000491607 GALNT8Q9NY28 637 aa16.66■□□□□ 0.26
SMIM4-205ENST00000491607 CLCF1Q9UBD9 225 aa16.66■□□□□ 0.26
SMIM4-205ENST00000491607 C19orf53Q9UNZ5 99 aaPredicted RBP16.66■□□□□ 0.26
SMIM4-205ENST00000491607 MRPS18CQ9Y3D5 142 aaKnown RBP16.66■□□□□ 0.26
SMIM4-205ENST00000491607 B4DXG7 233 aa16.65■□□□□ 0.26
SMIM4-205ENST00000491607 UPK1AO00322 258 aa16.65■□□□□ 0.26
SMIM4-205ENST00000491607 ZIC3O60481 467 aa16.65■□□□□ 0.26
SMIM4-205ENST00000491607 PLIN3O60664 434 aa16.65■□□□□ 0.26
SMIM4-205ENST00000491607 SEC22BO75396 215 aa16.65■□□□□ 0.26
SMIM4-205ENST00000491607 CD99P14209 185 aa16.65■□□□□ 0.26
SMIM4-205ENST00000491607 DSCR4P56555 118 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms