RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 ZNF559Q9BR84 538 aa16.37■□□□□ 0.21
HMGN1-219ENST00000491183 LRTM1Q9HBL6 345 aa16.37■□□□□ 0.21
HMGN1-219ENST00000491183 C1orf109Q9NX04 203 aa16.37■□□□□ 0.21
HMGN1-219ENST00000491183 MID2Q9UJV3 735 aa16.37■□□□□ 0.21
HMGN1-219ENST00000491183 FIS1Q9Y3D6 152 aa16.37■□□□□ 0.21
HMGN1-219ENST00000491183 WIF1Q9Y5W5 379 aa16.37■□□□□ 0.21
HMGN1-219ENST00000491183 POLQO75417 2590 aa16.37■□□□□ 0.21
HMGN1-219ENST00000491183 SYT5O00445 386 aa16.36■□□□□ 0.21
HMGN1-219ENST00000491183 RGS14O43566 566 aa16.36■□□□□ 0.21
HMGN1-219ENST00000491183 COQ9O75208 318 aa16.36■□□□□ 0.21
HMGN1-219ENST00000491183 SLITRK5O94991 958 aa16.36■□□□□ 0.21
HMGN1-219ENST00000491183 CHRNGP07510 517 aa16.36■□□□□ 0.21
HMGN1-219ENST00000491183 FGF4P08620 206 aa16.36■□□□□ 0.21
HMGN1-219ENST00000491183 NUDT17P0C025 328 aa16.36■□□□□ 0.21
HMGN1-219ENST00000491183 CPN1P15169 458 aa16.36■□□□□ 0.21
HMGN1-219ENST00000491183 BMP5P22003 454 aa16.36■□□□□ 0.21
HMGN1-219ENST00000491183 IL12BP29460 328 aa16.36■□□□□ 0.21
HMGN1-219ENST00000491183 KRT20P35900 424 aa16.36■□□□□ 0.21
HMGN1-219ENST00000491183 PSPHP78330 225 aa16.36■□□□□ 0.21
HMGN1-219ENST00000491183 ZNF155Q12901 538 aaPredicted RBP16.36■□□□□ 0.21
HMGN1-219ENST00000491183 GAB1Q13480 694 aa16.36■□□□□ 0.21
HMGN1-219ENST00000491183 SF3B4Q15427 424 aaKnown RBP eCLIP16.36■□□□□ 0.212e-7■■■■□ 20.5
HMGN1-219ENST00000491183 RFTN2Q52LD8 501 aaPredicted RBP16.36■□□□□ 0.21
HMGN1-219ENST00000491183 SH2D4BQ5SQS7 431 aa16.36■□□□□ 0.21
HMGN1-219ENST00000491183 KANK2Q63ZY3 851 aa16.36■□□□□ 0.21
HMGN1-219ENST00000491183 ANKRD26P1Q6NSI1 321 aa16.36■□□□□ 0.21
HMGN1-219ENST00000491183 ARSKQ6UWY0 536 aa16.36■□□□□ 0.21
HMGN1-219ENST00000491183 RNF165Q6ZSG1 346 aa16.36■□□□□ 0.21
HMGN1-219ENST00000491183 OR2L13Q8N349 312 aa16.36■□□□□ 0.21
HMGN1-219ENST00000491183 OR14L1PQ8NHC6 308 aa16.36■□□□□ 0.21
HMGN1-219ENST00000491183 ZPLD1Q8TCW7 415 aa16.36■□□□□ 0.21
HMGN1-219ENST00000491183 GFM2Q969S9 779 aaKnown RBP16.36■□□□□ 0.21
HMGN1-219ENST00000491183 APOPT1Q96IL0 206 aa16.36■□□□□ 0.21
HMGN1-219ENST00000491183 TRMOQ9BU70 441 aa16.36■□□□□ 0.21
HMGN1-219ENST00000491183 SLC17A7Q9P2U7 560 aa16.36■□□□□ 0.21
HMGN1-219ENST00000491183 ZNF629Q9UEG4 869 aaPredicted RBP16.36■□□□□ 0.21
HMGN1-219ENST00000491183 ITGB1BP2Q9UKP3 347 aa16.36■□□□□ 0.21
HMGN1-219ENST00000491183 OR10H1Q9Y4A9 318 aa16.36■□□□□ 0.21
HMGN1-219ENST00000491183 DNAJC15Q9Y5T4 150 aa16.36■□□□□ 0.21
HMGN1-219ENST00000491183 PCNX3Q9H6A9 2034 aa16.36■□□□□ 0.21
HMGN1-219ENST00000491183 DOCK7Q96N67 2140 aa16.36■□□□□ 0.21
HMGN1-219ENST00000491183 MBD3L4A6NDZ8 208 aaPredicted RBP16.35■□□□□ 0.21
HMGN1-219ENST00000491183 MBD3L3A6NE82 208 aaPredicted RBP16.35■□□□□ 0.21
HMGN1-219ENST00000491183 MBD3L5A6NJ08 208 aaPredicted RBP16.35■□□□□ 0.21
HMGN1-219ENST00000491183 DVL2O14641 736 aa16.35■□□□□ 0.21
HMGN1-219ENST00000491183 ZIC3O60481 467 aa16.35■□□□□ 0.21
HMGN1-219ENST00000491183 IL2RAP01589 272 aa16.35■□□□□ 0.21
HMGN1-219ENST00000491183 LINC00032P0C843 101 aa16.35■□□□□ 0.21
HMGN1-219ENST00000491183 GRK2P25098 689 aa16.35■□□□□ 0.21
HMGN1-219ENST00000491183 NTSP30990 170 aa16.35■□□□□ 0.21
HMGN1-219ENST00000491183 SRD5A2P31213 254 aa16.35■□□□□ 0.21
HMGN1-219ENST00000491183 STARP49675 285 aa16.35■□□□□ 0.21
HMGN1-219ENST00000491183 GFRA1P56159 465 aa16.35■□□□□ 0.21
HMGN1-219ENST00000491183 MYBPHQ13203 477 aa16.35■□□□□ 0.21
HMGN1-219ENST00000491183 UGT3A2Q3SY77 523 aa16.35■□□□□ 0.21
HMGN1-219ENST00000491183 CYP27C1Q4G0S4 372 aa16.35■□□□□ 0.21
HMGN1-219ENST00000491183 ZNF385BQ569K4 471 aa16.35■□□□□ 0.21
HMGN1-219ENST00000491183 ZNF551Q7Z340 670 aaPredicted RBP16.35■□□□□ 0.21
HMGN1-219ENST00000491183 RIBC1Q8N443 379 aaPredicted RBP16.35■□□□□ 0.21
HMGN1-219ENST00000491183 MBD3L2Q8NHZ7 208 aaPredicted RBP16.35■□□□□ 0.21
HMGN1-219ENST00000491183 FAM111AQ96PZ2 611 aa16.35■□□□□ 0.21
HMGN1-219ENST00000491183 SH3GL2Q99962 352 aa16.35■□□□□ 0.21
HMGN1-219ENST00000491183 TUBA1CQ9BQE3 449 aa16.35■□□□□ 0.21
HMGN1-219ENST00000491183 MECRQ9BV79 373 aa16.35■□□□□ 0.21
HMGN1-219ENST00000491183 RTN4RQ9BZR6 473 aa16.35■□□□□ 0.21
HMGN1-219ENST00000491183 CALHM2Q9HA72 323 aa16.35■□□□□ 0.21
HMGN1-219ENST00000491183 TAS2R10Q9NYW0 307 aa16.35■□□□□ 0.21
HMGN1-219ENST00000491183 FLRT3Q9NZU0 649 aa16.35■□□□□ 0.21
HMGN1-219ENST00000491183 LGALS13Q9UHV8 139 aa16.35■□□□□ 0.21
HMGN1-219ENST00000491183 MRPS18CQ9Y3D5 142 aaKnown RBP16.35■□□□□ 0.21
HMGN1-219ENST00000491183 TMEM233B4DJY2 109 aa16.34■□□□□ 0.21
HMGN1-219ENST00000491183 FADS1O60427 444 aa16.34■□□□□ 0.21
HMGN1-219ENST00000491183 SPAG7O75391 227 aa16.34■□□□□ 0.21
HMGN1-219ENST00000491183 CREB1P16220 341 aa16.34■□□□□ 0.21
HMGN1-219ENST00000491183 SDC1P18827 310 aa16.34■□□□□ 0.21
HMGN1-219ENST00000491183 FBXL19-AS1Q494R0 122 aa16.34■□□□□ 0.21
HMGN1-219ENST00000491183 ARL13AQ5H913 290 aaPredicted RBP16.34■□□□□ 0.21
HMGN1-219ENST00000491183 CES4AQ5XG92 561 aa16.34■□□□□ 0.21
HMGN1-219ENST00000491183 CDH24Q86UP0 819 aa16.34■□□□□ 0.21
HMGN1-219ENST00000491183 IFNEQ86WN2 208 aa16.34■□□□□ 0.21
HMGN1-219ENST00000491183 C9orf106Q8NAJ2 232 aa16.34■□□□□ 0.21
HMGN1-219ENST00000491183 AENQ8WTP8 325 aaKnown RBP16.34■□□□□ 0.21
HMGN1-219ENST00000491183 CIDECQ96AQ7 238 aaPredicted RBP16.34■□□□□ 0.21
HMGN1-219ENST00000491183 LMF2Q9BU23 707 aaKnown RBP16.34■□□□□ 0.21
HMGN1-219ENST00000491183 G6PC3Q9BUM1 346 aa16.34■□□□□ 0.21
HMGN1-219ENST00000491183 IQCGQ9H095 443 aaKnown RBP16.34■□□□□ 0.21
HMGN1-219ENST00000491183 SLC24A3Q9HC58 644 aa16.34■□□□□ 0.21
HMGN1-219ENST00000491183 DDX18Q9NVP1 670 aaKnown RBP16.34■□□□□ 0.21
HMGN1-219ENST00000491183 BAIAP2L1Q9UHR4 511 aa16.34■□□□□ 0.21
HMGN1-219ENST00000491183 TRAF6Q9Y4K3 522 aa16.34■□□□□ 0.21
HMGN1-219ENST00000491183 LSM1O15116 133 aaKnown RBP16.33■□□□□ 0.2
HMGN1-219ENST00000491183 AKAP10O43572 662 aa16.33■□□□□ 0.2
HMGN1-219ENST00000491183 NPHS1O60500 1241 aa16.33■□□□□ 0.2
HMGN1-219ENST00000491183 TBX19O60806 448 aa16.33■□□□□ 0.2
HMGN1-219ENST00000491183 CTSSP25774 331 aa16.33■□□□□ 0.2
HMGN1-219ENST00000491183 UQCRC1P31930 480 aa16.33■□□□□ 0.2
HMGN1-219ENST00000491183 EVI2BP34910 448 aa16.33■□□□□ 0.2
HMGN1-219ENST00000491183 LHX2P50458 406 aa16.33■□□□□ 0.2
HMGN1-219ENST00000491183 ASCL1P50553 236 aa16.33■□□□□ 0.2
HMGN1-219ENST00000491183 AGFG1P52594 562 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms