RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 SPAARA0A1B0GVQ0 90 aa21.31■■□□□ 1
USF3-203ENST00000491165 AGAP5A6NIR3 686 aa21.31■■□□□ 1
USF3-203ENST00000491165 H3BMH7 237 aa21.31■■□□□ 1
USF3-203ENST00000491165 ANKRD34CP0C6C1 535 aa21.31■■□□□ 1
USF3-203ENST00000491165 GABRB1P18505 474 aa21.31■■□□□ 1
USF3-203ENST00000491165 PHF19Q5T6S3 580 aa21.31■■□□□ 1
USF3-203ENST00000491165 TRIM40Q6P9F5 258 aa21.31■■□□□ 1
USF3-203ENST00000491165 CCDC80Q76M96 950 aa21.31■■□□□ 1
USF3-203ENST00000491165 COMMD6Q7Z4G1 85 aa21.31■■□□□ 1
USF3-203ENST00000491165 ASPGQ86U10 573 aa21.31■■□□□ 1
USF3-203ENST00000491165 ARMC8Q8IUR7 673 aa21.31■■□□□ 1
USF3-203ENST00000491165 KBTBD8Q8NFY9 601 aa21.31■■□□□ 1
USF3-203ENST00000491165 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.31■■□□□ 1
USF3-203ENST00000491165 ZNF717Q9BY31 904 aaPredicted RBP21.31■■□□□ 1
USF3-203ENST00000491165 C6orf62Q9GZU0 229 aaPredicted RBP21.31■■□□□ 1
USF3-203ENST00000491165 CHRNA10Q9GZZ6 450 aa21.31■■□□□ 1
USF3-203ENST00000491165 SP140LQ9H930 580 aa21.31■■□□□ 1
USF3-203ENST00000491165 IMPAD1Q9NX62 359 aa21.31■■□□□ 1
USF3-203ENST00000491165 MRPS2Q9Y399 296 aaKnown RBP21.31■■□□□ 1
USF3-203ENST00000491165 TOX3O15405 576 aaPredicted RBP21.31■■□□□ 1
USF3-203ENST00000491165 STSP08842 583 aa21.31■■□□□ 1
USF3-203ENST00000491165 ADORA3P0DMS8 318 aa21.31■■□□□ 1
USF3-203ENST00000491165 RPL3P39023 403 aaKnown RBP21.31■■□□□ 1
USF3-203ENST00000491165 ZNF181Q2M3W8 571 aa21.31■■□□□ 1
USF3-203ENST00000491165 COLEC12Q5KU26 742 aa21.31■■□□□ 1
USF3-203ENST00000491165 C10orf62Q5T681 223 aaPredicted RBP21.31■■□□□ 1
USF3-203ENST00000491165 DEPDC1Q5TB30 811 aa21.31■■□□□ 1
USF3-203ENST00000491165 KHDRBS2Q5VWX1 349 aaKnown RBP21.31■■□□□ 1
USF3-203ENST00000491165 DHRS13Q6UX07 377 aa21.31■■□□□ 1
USF3-203ENST00000491165 UBE3DQ7Z6J8 389 aa21.31■■□□□ 1
USF3-203ENST00000491165 TTLQ8NG68 377 aa21.31■■□□□ 1
USF3-203ENST00000491165 GEMIN6Q8WXD5 167 aaKnown RBP21.31■■□□□ 1
USF3-203ENST00000491165 PPCDCQ96CD2 204 aa21.31■■□□□ 1
USF3-203ENST00000491165 SLC6A16Q9GZN6 736 aa21.31■■□□□ 1
USF3-203ENST00000491165 ABCB10Q9NRK6 738 aa21.31■■□□□ 1
USF3-203ENST00000491165 PLPP1O14494 284 aa21.3■■□□□ 1
USF3-203ENST00000491165 MED26O95402 600 aa21.3■■□□□ 1
USF3-203ENST00000491165 GBAP04062 536 aa21.3■■□□□ 1
USF3-203ENST00000491165 FURINP09958 794 aa21.3■■□□□ 1
USF3-203ENST00000491165 DBTP11182 482 aaKnown RBP21.3■■□□□ 1
USF3-203ENST00000491165 SERPINB1P30740 379 aa21.3■■□□□ 1
USF3-203ENST00000491165 CDK6Q00534 326 aa21.3■■□□□ 1
USF3-203ENST00000491165 CDC20Q12834 499 aa21.3■■□□□ 1
USF3-203ENST00000491165 PRAMEF17Q5VTA0 474 aa21.3■■□□□ 1
USF3-203ENST00000491165 LYSMD2Q8IV50 215 aa21.3■■□□□ 1
USF3-203ENST00000491165 SHISA5Q8N114 240 aa21.3■■□□□ 1
USF3-203ENST00000491165 AMER3Q8N944 861 aa21.3■■□□□ 1
USF3-203ENST00000491165 HPS1Q92902 700 aa21.3■■□□□ 1
USF3-203ENST00000491165 CIDECQ96AQ7 238 aaPredicted RBP21.3■■□□□ 1
USF3-203ENST00000491165 MS4A6EQ96DS6 147 aa21.3■■□□□ 1
USF3-203ENST00000491165 RNF31Q96EP0 1072 aa21.3■■□□□ 1
USF3-203ENST00000491165 CPNE5Q9HCH3 593 aa21.3■■□□□ 1
USF3-203ENST00000491165 ACSL6Q9UKU0 697 aa21.3■■□□□ 1
USF3-203ENST00000491165 PRAMEF25A6NGN4 478 aa21.29■■□□□ 1
USF3-203ENST00000491165 IFNA14P01570 189 aa21.29■■□□□ 1
USF3-203ENST00000491165 CHI3L1P36222 383 aaPredicted RBP21.29■■□□□ 1
USF3-203ENST00000491165 PDE7AQ13946 482 aa21.29■■□□□ 1
USF3-203ENST00000491165 ARHGEF39Q8N4T4 335 aa21.29■■□□□ 1
USF3-203ENST00000491165 TBC1D19Q8N5T2 526 aa21.29■■□□□ 1
USF3-203ENST00000491165 OR9Q2Q8NGE9 314 aa21.29■■□□□ 1
USF3-203ENST00000491165 PIP5K1AQ99755 562 aa21.29■■□□□ 1
USF3-203ENST00000491165 NXF2Q9GZY0 626 aaKnown RBP21.29■■□□□ 1
USF3-203ENST00000491165 CCDC59Q9P031 241 aaKnown RBP21.29■■□□□ 1
USF3-203ENST00000491165 LOC100506127A0A0U1RQW1 187 aa21.29■■□□□ 1
USF3-203ENST00000491165 OLR1P78380 273 aa21.29■■□□□ 1
USF3-203ENST00000491165 MC1RQ01726 317 aa21.29■■□□□ 1
USF3-203ENST00000491165 EEF1A2Q05639 463 aaKnown RBP21.29■■□□□ 1
USF3-203ENST00000491165 ST3GAL4Q11206 333 aa21.29■■□□□ 1
USF3-203ENST00000491165 ZNF630Q2M218 657 aaPredicted RBP21.29■■□□□ 1
USF3-203ENST00000491165 CRB2Q5IJ48 1285 aa21.29■■□□□ 1
USF3-203ENST00000491165 KMT5CQ86Y97 462 aa21.29■■□□□ 1
USF3-203ENST00000491165 CSNK1A1LQ8N752 337 aa21.29■■□□□ 1
USF3-203ENST00000491165 WDR48Q8TAF3 677 aa21.29■■□□□ 1
USF3-203ENST00000491165 RERGQ96A58 199 aaPredicted RBP21.29■■□□□ 1
USF3-203ENST00000491165 CRELD1Q96HD1 420 aa21.29■■□□□ 1
USF3-203ENST00000491165 ZNF285Q96NJ3 590 aa21.29■■□□□ 1
USF3-203ENST00000491165 DPYSL5Q9BPU6 564 aa21.29■■□□□ 1
USF3-203ENST00000491165 SPRTNQ9H040 489 aaPredicted RBP21.29■■□□□ 1
USF3-203ENST00000491165 OCIAD1Q9NX40 245 aa21.29■■□□□ 1
USF3-203ENST00000491165 MAP4K5Q9Y4K4 846 aa21.29■■□□□ 1
USF3-203ENST00000491165 FER1L5A0AVI2 2057 aa21.28■■□□□ 1
USF3-203ENST00000491165 KLHL18O94889 574 aa21.28■■□□□ 1
USF3-203ENST00000491165 PTHP01270 115 aa21.28■■□□□ 1
USF3-203ENST00000491165 GRK5P34947 590 aa21.28■■□□□ 1
USF3-203ENST00000491165 ARL4DP49703 201 aa21.28■■□□□ 1
USF3-203ENST00000491165 RAB8AP61006 207 aa21.28■■□□□ 1
USF3-203ENST00000491165 C2orf80Q0P641 193 aa21.28■■□□□ 1
USF3-203ENST00000491165 ILKQ13418 452 aa21.28■■□□□ 1
USF3-203ENST00000491165 CLPPQ16740 277 aaPredicted RBP21.28■■□□□ 1
USF3-203ENST00000491165 ARMCX4Q5H9R4 360 aa21.28■■□□□ 1
USF3-203ENST00000491165 PRSS41Q7RTY9 318 aa21.28■■□□□ 1
USF3-203ENST00000491165 RNF130Q86XS8 419 aa21.28■■□□□ 1
USF3-203ENST00000491165 NT5CQ8TCD5 201 aa21.28■■□□□ 1
USF3-203ENST00000491165 C16orf78Q8WTQ4 265 aa21.28■■□□□ 1
USF3-203ENST00000491165 C17orf62Q9BQA9 187 aa21.28■■□□□ 1
USF3-203ENST00000491165 MYNNQ9NPC7 610 aa21.28■■□□□ 1
USF3-203ENST00000491165 ENOPH1Q9UHY7 261 aa21.28■■□□□ 1
USF3-203ENST00000491165 PLCL2Q9UPR0 1127 aa21.28■■□□□ 1
USF3-203ENST00000491165 UGT2A1Q9Y4X1 527 aa21.28■■□□□ 1
USF3-203ENST00000491165 PCDHGA3Q9Y5H0 932 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms