RNA–Protein interactions for RNA: ENST00000491139.5

NELFE-210, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-210ENST00000491139 ZNF611Q8N823 705 aa18.75■□□□□ 0.59
NELFE-210ENST00000491139 ATP6V1E2Q96A05 226 aa18.75■□□□□ 0.59
NELFE-210ENST00000491139 KLHL29Q96CT2 875 aa18.75■□□□□ 0.59
NELFE-210ENST00000491139 TRIM44Q96DX7 344 aaPredicted RBP18.75■□□□□ 0.59
NELFE-210ENST00000491139 CDK15Q96Q40 435 aa18.75■□□□□ 0.59
NELFE-210ENST00000491139 FRG2BQ96QU4 278 aa18.75■□□□□ 0.59
NELFE-210ENST00000491139 ERP44Q9BS26 406 aa18.75■□□□□ 0.59
NELFE-210ENST00000491139 NOL11Q9H8H0 719 aaKnown RBP18.75■□□□□ 0.59
NELFE-210ENST00000491139 ZNF175Q9Y473 711 aa18.75■□□□□ 0.59
NELFE-210ENST00000491139 PRR14LQ5THK1 2151 aa18.74■□□□□ 0.59
NELFE-210ENST00000491139 RNF223E7ERA6 249 aa18.74■□□□□ 0.59
NELFE-210ENST00000491139 HS3ST1O14792 307 aa18.74■□□□□ 0.59
NELFE-210ENST00000491139 RAD51CO43502 376 aa18.74■□□□□ 0.59
NELFE-210ENST00000491139 SOX30O94993 753 aa18.74■□□□□ 0.59
NELFE-210ENST00000491139 SIX3O95343 332 aaPredicted RBP18.74■□□□□ 0.59
NELFE-210ENST00000491139 TP53P04637 393 aaPredicted RBP18.74■□□□□ 0.59
NELFE-210ENST00000491139 THBDP07204 575 aa18.74■□□□□ 0.59
NELFE-210ENST00000491139 PCSK2P16519 638 aa18.74■□□□□ 0.59
NELFE-210ENST00000491139 IL12BP29460 328 aa18.74■□□□□ 0.59
NELFE-210ENST00000491139 CLDN15P56746 228 aa18.74■□□□□ 0.59
NELFE-210ENST00000491139 MRPS35P82673 323 aaKnown RBP18.74■□□□□ 0.59
NELFE-210ENST00000491139 DUSP2Q05923 314 aa18.74■□□□□ 0.59
NELFE-210ENST00000491139 C2orf54Q08AI8 447 aa18.74■□□□□ 0.59
NELFE-210ENST00000491139 VEZF1Q14119 521 aa18.74■□□□□ 0.59
NELFE-210ENST00000491139 LTB4RQ15722 352 aa18.74■□□□□ 0.59
NELFE-210ENST00000491139 EXOC3L2Q2M3D2 409 aa18.74■□□□□ 0.59
NELFE-210ENST00000491139 C10orf62Q5T681 223 aaPredicted RBP18.74■□□□□ 0.59
NELFE-210ENST00000491139 RAET1LQ5VY80 246 aa18.74■□□□□ 0.59
NELFE-210ENST00000491139 TTC19Q6DKK2 380 aaPredicted RBP18.74■□□□□ 0.59
NELFE-210ENST00000491139 METTL2BQ6P1Q9 378 aaKnown RBP18.74■□□□□ 0.59
NELFE-210ENST00000491139 LARP4Q71RC2 724 aaKnown RBP eCLIP18.74■□□□□ 0.59
NELFE-210ENST00000491139 CENPLQ8N0S6 344 aaPredicted RBP18.74■□□□□ 0.59
NELFE-210ENST00000491139 METTL4Q8N3J2 472 aa18.74■□□□□ 0.59
NELFE-210ENST00000491139 MAPK1IP1LQ8NDC0 245 aa18.74■□□□□ 0.59
NELFE-210ENST00000491139 FNDC9Q8TBE3 224 aa18.74■□□□□ 0.59
NELFE-210ENST00000491139 BTBD9Q96Q07 612 aa18.74■□□□□ 0.59
NELFE-210ENST00000491139 RAB17Q9H0T7 212 aa18.74■□□□□ 0.59
NELFE-210ENST00000491139 ZNF780BQ9Y6R6 833 aa18.74■□□□□ 0.59
NELFE-210ENST00000491139 B4DXG7 233 aa18.73■□□□□ 0.59
NELFE-210ENST00000491139 H0YC42 278 aa18.73■□□□□ 0.59
NELFE-210ENST00000491139 EIF3HO15372 352 aaKnown RBP eCLIP18.73■□□□□ 0.59
NELFE-210ENST00000491139 SEC14L5O43304 696 aa18.73■□□□□ 0.59
NELFE-210ENST00000491139 TSPAN2O60636 221 aa18.73■□□□□ 0.59
NELFE-210ENST00000491139 BCAS2O75934 225 aaPredicted RBP18.73■□□□□ 0.59
NELFE-210ENST00000491139 GSTA2P09210 222 aa18.73■□□□□ 0.59
NELFE-210ENST00000491139 SUCLG1P53597 346 aaKnown RBP18.73■□□□□ 0.59
NELFE-210ENST00000491139 GAS1P54826 345 aa18.73■□□□□ 0.59
NELFE-210ENST00000491139 TPD52P55327 224 aaPredicted RBP18.73■□□□□ 0.59
NELFE-210ENST00000491139 ACAP2Q15057 778 aa18.73■□□□□ 0.59
NELFE-210ENST00000491139 PON3Q15166 354 aa18.73■□□□□ 0.59
NELFE-210ENST00000491139 CLEC12BQ2HXU8 276 aa18.73■□□□□ 0.59
NELFE-210ENST00000491139 FAM214BQ7L5A3 538 aa18.73■□□□□ 0.59
NELFE-210ENST00000491139 COMMD6Q7Z4G1 85 aa18.73■□□□□ 0.59
NELFE-210ENST00000491139 CCDC91Q7Z6B0 441 aa18.73■□□□□ 0.59
NELFE-210ENST00000491139 MILR1Q7Z6M3 343 aa18.73■□□□□ 0.59
NELFE-210ENST00000491139 TMEM158Q8WZ71 300 aa18.73■□□□□ 0.59
NELFE-210ENST00000491139 CNRIP1Q96F85 164 aaPredicted RBP18.73■□□□□ 0.59
NELFE-210ENST00000491139 PPP4R1LQ9P1A2 415 aa18.73■□□□□ 0.59
NELFE-210ENST00000491139 CPSF2Q9P2I0 782 aaKnown RBP18.73■□□□□ 0.59
NELFE-210ENST00000491139 ZNF337Q9Y3M9 751 aa18.73■□□□□ 0.59
NELFE-210ENST00000491139 A0A087X1B8 175 aa18.72■□□□□ 0.59
NELFE-210ENST00000491139 UQCRHLA0A096LP55 91 aa18.72■□□□□ 0.59
NELFE-210ENST00000491139 LINC01387J3KSC0 135 aa18.72■□□□□ 0.59
NELFE-210ENST00000491139 OR7A17O14581 309 aa18.72■□□□□ 0.59
NELFE-210ENST00000491139 PLAUP00749 431 aa18.72■□□□□ 0.59
NELFE-210ENST00000491139 CT45A8P0DMV1 189 aa18.72■□□□□ 0.59
NELFE-210ENST00000491139 CT45A9P0DMV2 189 aa18.72■□□□□ 0.59
NELFE-210ENST00000491139 HK1P19367 917 aa18.72■□□□□ 0.59
NELFE-210ENST00000491139 ALDH9A1P49189 494 aa18.72■□□□□ 0.59
NELFE-210ENST00000491139 CCNG1P51959 295 aa18.72■□□□□ 0.59
NELFE-210ENST00000491139 PNLIPRP2P54317 469 aa18.72■□□□□ 0.59
NELFE-210ENST00000491139 CORO7P57737 925 aa18.72■□□□□ 0.59
NELFE-210ENST00000491139 PSPHP78330 225 aa18.72■□□□□ 0.59
NELFE-210ENST00000491139 MRPS22P82650 360 aaKnown RBP18.72■□□□□ 0.59
NELFE-210ENST00000491139 IRF9Q00978 393 aa18.72■□□□□ 0.59
NELFE-210ENST00000491139 IFT88Q13099 833 aa18.72■□□□□ 0.59
NELFE-210ENST00000491139 GUSBP1Q15486 140 aa18.72■□□□□ 0.59
NELFE-210ENST00000491139 CT45A2Q5DJT8 189 aa18.72■□□□□ 0.59
NELFE-210ENST00000491139 FAM180BQ6P0A1 224 aa18.72■□□□□ 0.59
NELFE-210ENST00000491139 OR52B6Q8NGF0 335 aa18.72■□□□□ 0.59
NELFE-210ENST00000491139 RNF138Q8WVD3 245 aa18.72■□□□□ 0.59
NELFE-210ENST00000491139 TM4SF18Q96CE8 201 aa18.72■□□□□ 0.59
NELFE-210ENST00000491139 PLPPR2Q96GM1 343 aa18.72■□□□□ 0.59
NELFE-210ENST00000491139 ZNF681Q96N22 645 aa18.72■□□□□ 0.59
NELFE-210ENST00000491139 FAIM2Q9BWQ8 316 aa18.72■□□□□ 0.59
NELFE-210ENST00000491139 DSN1Q9H410 356 aa18.72■□□□□ 0.59
NELFE-210ENST00000491139 LAMP3Q9UQV4 416 aa18.72■□□□□ 0.59
NELFE-210ENST00000491139 ANK3Q12955 4377 aaKnown RBP18.72■□□□□ 0.59
NELFE-210ENST00000491139 C17orf51A8MQB3 221 aa18.71■□□□□ 0.59
NELFE-210ENST00000491139 ALDOAP04075 364 aaKnown RBP18.71■□□□□ 0.59
NELFE-210ENST00000491139 RPS3AP61247 264 aaKnown RBP18.71■□□□□ 0.59
NELFE-210ENST00000491139 CALCOCO2Q13137 446 aa18.71■□□□□ 0.59
NELFE-210ENST00000491139 ETFDHQ16134 617 aa18.71■□□□□ 0.59
NELFE-210ENST00000491139 SGO1Q5FBB7 561 aa18.71■□□□□ 0.59
NELFE-210ENST00000491139 FADS6Q8N9I5 356 aa18.71■□□□□ 0.59
NELFE-210ENST00000491139 ZNF675Q8TD23 568 aa18.71■□□□□ 0.59
NELFE-210ENST00000491139 ERP27Q96DN0 273 aa18.71■□□□□ 0.59
NELFE-210ENST00000491139 NTMT1Q9BV86 223 aa18.71■□□□□ 0.59
NELFE-210ENST00000491139 REG4Q9BYZ8 158 aa18.71■□□□□ 0.59
NELFE-210ENST00000491139 STMN4Q9H169 189 aaPredicted RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms