RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 PMEPA1Q969W9 287 aa18.2■□□□□ 0.5
SNAPC3-206ENST00000490969 FNDC11Q9BVV2 318 aa18.2■□□□□ 0.5
SNAPC3-206ENST00000490969 OSGEPL1Q9H4B0 414 aa18.2■□□□□ 0.5
SNAPC3-206ENST00000490969 EGLN3Q9H6Z9 239 aa18.2■□□□□ 0.5
SNAPC3-206ENST00000490969 SEC14L3Q9UDX4 400 aa18.2■□□□□ 0.5
SNAPC3-206ENST00000490969 TRANK1O15050 2925 aa18.2■□□□□ 0.5
SNAPC3-206ENST00000490969 LOC105369274A0A096LPK9 316 aa18.19■□□□□ 0.5
SNAPC3-206ENST00000490969 OR2AG2A6NM03 316 aa18.19■□□□□ 0.5
SNAPC3-206ENST00000490969 ANHXE9PGG2 379 aa18.19■□□□□ 0.5
SNAPC3-206ENST00000490969 CACNB4O00305 520 aaPredicted RBP18.19■□□□□ 0.5
SNAPC3-206ENST00000490969 FOXE1O00358 373 aaPredicted RBP18.19■□□□□ 0.5
SNAPC3-206ENST00000490969 DVL2O14641 736 aa18.19■□□□□ 0.5
SNAPC3-206ENST00000490969 SERPINI2O75830 405 aa18.19■□□□□ 0.5
SNAPC3-206ENST00000490969 SYPP08247 313 aa18.19■□□□□ 0.5
SNAPC3-206ENST00000490969 RAB8AP61006 207 aa18.19■□□□□ 0.5
SNAPC3-206ENST00000490969 SRP54P61011 504 aaKnown RBP18.19■□□□□ 0.5
SNAPC3-206ENST00000490969 PUDPQ08623 228 aa18.19■□□□□ 0.5
SNAPC3-206ENST00000490969 OR4N4Q8N0Y3 316 aa18.19■□□□□ 0.5
SNAPC3-206ENST00000490969 OVCA2Q8WZ82 227 aa18.19■□□□□ 0.5
SNAPC3-206ENST00000490969 SAP130Q9H0E3 1048 aa18.19■□□□□ 0.5
SNAPC3-206ENST00000490969 ERVMER34-1Q9H9K5 563 aa18.19■□□□□ 0.5
SNAPC3-206ENST00000490969 CBLCQ9ULV8 474 aa18.19■□□□□ 0.5
SNAPC3-206ENST00000490969 NUBP2Q9Y5Y2 271 aa18.19■□□□□ 0.5
SNAPC3-206ENST00000490969 CKAP5Q14008 2032 aa18.19■□□□□ 0.5
SNAPC3-206ENST00000490969 M0R3H8 397 aa18.19■□□□□ 0.5
SNAPC3-206ENST00000490969 CFDP00746 253 aaPredicted RBP18.19■□□□□ 0.5
SNAPC3-206ENST00000490969 CATP04040 527 aaKnown RBP18.19■□□□□ 0.5
SNAPC3-206ENST00000490969 EIF4EP06730 217 aaKnown RBP18.19■□□□□ 0.5
SNAPC3-206ENST00000490969 SPINT3P49223 89 aa18.19■□□□□ 0.5
SNAPC3-206ENST00000490969 SRP9P49458 86 aaKnown RBP18.19■□□□□ 0.5
SNAPC3-206ENST00000490969 ENTPD8Q5MY95 495 aa18.19■□□□□ 0.5
SNAPC3-206ENST00000490969 EOGTQ5NDL2 527 aa18.19■□□□□ 0.5
SNAPC3-206ENST00000490969 GARNL3Q5VVW2 1013 aa18.19■□□□□ 0.5
SNAPC3-206ENST00000490969 VASNQ6EMK4 673 aa18.19■□□□□ 0.5
SNAPC3-206ENST00000490969 FAM109BQ6ICB4 259 aaPredicted RBP18.19■□□□□ 0.5
SNAPC3-206ENST00000490969 C1orf94Q6P1W5 598 aa18.19■□□□□ 0.5
SNAPC3-206ENST00000490969 IL20RBQ6UXL0 311 aa18.19■□□□□ 0.5
SNAPC3-206ENST00000490969 NXPE2Q96DL1 559 aa18.19■□□□□ 0.5
SNAPC3-206ENST00000490969 MAN2C1Q9NTJ4 1040 aa18.19■□□□□ 0.5
SNAPC3-206ENST00000490969 ASB6Q9NWX5 421 aa18.19■□□□□ 0.5
SNAPC3-206ENST00000490969 A0A1B0GVI7 797 aa18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 GRXCR1A8MXD5 290 aa18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 KDM4EB2RXH2 506 aaPredicted RBP18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 CHST10O43529 356 aa18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 TCRBP04435 133 aa18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 DNASE1P24855 282 aa18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 ZNF791Q3KP31 576 aaPredicted RBP18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 LRRC73Q5JTD7 316 aa18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 SLC27A4Q6P1M0 643 aa18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 TECPR1Q7Z6L1 1165 aa18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 COMTD1Q86VU5 262 aa18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 GPR135Q8IZ08 494 aa18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 OR4F15Q8NGB8 312 aa18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 OR2AP1Q8NGE2 309 aa18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 TRMT2BQ96GJ1 504 aaKnown RBP18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 ICKQ9UPZ9 632 aa18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 SH2B3Q9UQQ2 575 aa18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 INSL6Q9Y581 213 aa18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 A0A1B0GVC2 190 aa18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 A6NIN4 97 aa18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 BNIP3LO60238 219 aa18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 RBMS1P29558 406 aaKnown RBP18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 PPM1AP35813 382 aa18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 PREPP48147 710 aa18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 RFX3P48380 749 aa18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 PITPNBP48739 271 aa18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 LILRA6Q6PI73 481 aa18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 MEX3DQ86XN8 651 aaKnown RBP18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 BMPERQ8N8U9 685 aa18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 POGLUT1Q8NBL1 392 aa18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 MORN4Q8NDC4 146 aa18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 TEX47Q8TBZ9 253 aa18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 MRPS31Q92665 395 aaKnown RBP18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 VOPP1Q96AW1 172 aa18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 ZNF607Q96SK3 696 aa18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 SECISBP2Q96T21 854 aaKnown RBP18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 GSX2Q9BZM3 304 aa18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 HCFC1R1Q9NWW0 138 aa18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 RDH8Q9NYR8 311 aa18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 RABL2BQ9UNT1 228 aa18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 MYO9BQ13459 2157 aa18.18■□□□□ 0.5
SNAPC3-206ENST00000490969 MEIKINA0A087WXM9 373 aa18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 GPR171O14626 319 aa18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 NPC1O15118 1278 aa18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 TPPPO94811 219 aa18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 EPHB3P54753 998 aa18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 CDH11P55287 796 aa18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 ACSM1Q08AH1 577 aa18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 SYTL3Q4VX76 610 aa18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 PLPP4Q5VZY2 271 aa18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 HBMQ6B0K9 141 aa18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 TMEM81Q6P7N7 255 aa18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 ARSKQ6UWY0 536 aa18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 OAFQ86UD1 273 aa18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 LRRC56Q8IYG6 542 aaPredicted RBP18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 KLHL36Q8N4N3 616 aa18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 LINC00471Q8N535 108 aa18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 LILRA3Q8N6C8 439 aaPredicted RBP18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 OR8K5Q8NH50 307 aa18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 SPRYD4Q8WW59 207 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms