RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 CSNK2A2P19784 350 aaPredicted RBP9.48□□□□□ -0.89
TTC28-207ENST00000490475 ENDOUP21128 410 aaKnown RBP9.48□□□□□ -0.89
TTC28-207ENST00000490475 NT5EP21589 574 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 TACR1P25103 407 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 CEACAM8P31997 349 aaPredicted RBP9.48□□□□□ -0.89
TTC28-207ENST00000490475 CDK9P50750 372 aaKnown RBP9.48□□□□□ -0.89
TTC28-207ENST00000490475 ART1P52961 327 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 SLC18A1P54219 525 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 DUSP2Q05923 314 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 C2orf80Q0P641 193 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 MAP4K2Q12851 820 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 DUSP8Q13202 625 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 STX3Q13277 289 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 GALNTL6Q49A17 601 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 NSUN5P2Q63ZY6 315 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 SLC30A6Q6NXT4 461 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 NUP54Q7Z3B4 507 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 ZNF781Q8N8C0 355 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 ZNF615Q8N8J6 731 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 GOT1L1Q8NHS2 421 aaPredicted RBP9.48□□□□□ -0.89
TTC28-207ENST00000490475 CDC26Q8NHZ8 85 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.48□□□□□ -0.89
TTC28-207ENST00000490475 RNASE6Q93091 150 aaKnown RBP9.48□□□□□ -0.89
TTC28-207ENST00000490475 ADIPOR1Q96A54 375 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 CNRIP1Q96F85 164 aaPredicted RBP9.48□□□□□ -0.89
TTC28-207ENST00000490475 EGLN2Q96KS0 407 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 RILPQ96NA2 401 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 SORT1Q99523 831 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 FOXC2Q99958 501 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 POLDIP3Q9BY77 421 aaKnown RBP9.48□□□□□ -0.89
TTC28-207ENST00000490475 PRDM14Q9GZV8 571 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 UBQLN3Q9H347 655 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 METTL7AQ9H8H3 244 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 CALHM2Q9HA72 323 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 PROK2Q9HC23 129 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 PNPOQ9NVS9 261 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 C1orf109Q9NX04 203 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 DNAJB12Q9NXW2 375 aaKnown RBP9.48□□□□□ -0.89
TTC28-207ENST00000490475 NKIRAS1Q9NYS0 192 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 SPRR3Q9UBC9 169 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 BAIAP2L1Q9UHR4 511 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 ZNF780BQ9Y6R6 833 aa9.48□□□□□ -0.89
TTC28-207ENST00000490475 ITPR3Q14573 2671 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 AKAP6Q13023 2319 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 EXPH5Q8NEV8 1989 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 CD8B2A6NJW9 211 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 NPIPB8E9PQR5 432 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 LSM1O15116 133 aaKnown RBP9.47□□□□□ -0.89
TTC28-207ENST00000490475 SKAP2O75563 359 aaPredicted RBP9.47□□□□□ -0.89
TTC28-207ENST00000490475 CTAG2O75638 210 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 PPM1BO75688 479 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 IL18BPO95998 194 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 CLPSP04118 112 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 JUNP05412 331 aaKnown RBP9.47□□□□□ -0.89
TTC28-207ENST00000490475 S1PR1P21453 382 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 PRPH2P23942 346 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 GRK2P25098 689 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 ABCD3P28288 659 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 SSTR4P31391 388 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 DNAJA1P31689 397 aaKnown RBP9.47□□□□□ -0.89
TTC28-207ENST00000490475 OPRM1P35372 400 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 SOX18P35713 384 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 ADH7P40394 386 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 CASP3P42574 277 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 GSTM5P46439 218 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 RPL14P50914 215 aaKnown RBP9.47□□□□□ -0.89
TTC28-207ENST00000490475 SORDQ00796 357 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 CRYZQ08257 329 aaKnown RBP9.47□□□□□ -0.89
TTC28-207ENST00000490475 ZNF763Q0D2J5 394 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 MGAT2Q10469 447 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 BST1Q10588 318 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 HEPACAMQ14CZ8 416 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 TOMM20Q15388 145 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 ACSF3Q4G176 576 aaPredicted RBP9.47□□□□□ -0.89
TTC28-207ENST00000490475 FLYWCH1Q4VC44 716 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 TIGD3Q6B0B8 471 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 VASNQ6EMK4 673 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 FAM71E1Q6IPT2 247 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 FAM111BQ6SJ93 734 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 ENPP6Q6UWR7 440 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 RNF165Q6ZSG1 346 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 CAMKMTQ7Z624 323 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 CCDC116Q8IYX3 515 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 SIMC1Q8NDZ2 872 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 ADCY4Q8NFM4 1077 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 OR1J4Q8NGS1 313 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 GFM2Q969S9 779 aaKnown RBP9.47□□□□□ -0.89
TTC28-207ENST00000490475 EXOSC8Q96B26 276 aaKnown RBP9.47□□□□□ -0.89
TTC28-207ENST00000490475 KLHL29Q96CT2 875 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 NTNG2Q96CW9 530 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 TMCO6Q96DC7 493 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 RMND5BQ96G75 393 aaPredicted RBP9.47□□□□□ -0.89
TTC28-207ENST00000490475 LCORQ96JN0 433 aaPredicted RBP9.47□□□□□ -0.89
TTC28-207ENST00000490475 PPP1R36Q96LQ0 422 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 ZNF681Q96N22 645 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 TIMP4Q99727 224 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 SLC6A15Q9H2J7 730 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 UTS2RQ9UKP6 389 aa9.47□□□□□ -0.89
TTC28-207ENST00000490475 EXO1Q9UQ84 846 aaKnown RBP9.47□□□□□ -0.89
TTC28-207ENST00000490475 C15orf41Q9Y2V0 281 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms