RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 EIF2S3P41091 472 aaKnown RBP12.36□□□□□ -0.43
TRAIP-210ENST00000489948 CRISP3P54108 245 aa12.36□□□□□ -0.43
TRAIP-210ENST00000489948 RRADP55042 308 aa12.36□□□□□ -0.43
TRAIP-210ENST00000489948 CASP9P55211 416 aa12.36□□□□□ -0.43
TRAIP-210ENST00000489948 SOX8P57073 446 aa12.36□□□□□ -0.43
TRAIP-210ENST00000489948 POU6F2P78424 691 aaPredicted RBP12.36□□□□□ -0.43
TRAIP-210ENST00000489948 TRAP1Q12931 704 aaKnown RBP12.36□□□□□ -0.43
TRAIP-210ENST00000489948 SRSF6Q13247 344 aaKnown RBP12.36□□□□□ -0.43
TRAIP-210ENST00000489948 SCARB2Q14108 478 aa12.36□□□□□ -0.43
TRAIP-210ENST00000489948 TRIM25Q14258 630 aaKnown RBP12.36□□□□□ -0.43
TRAIP-210ENST00000489948 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.36□□□□□ -0.43
TRAIP-210ENST00000489948 MTX3Q5HYI7 312 aa12.36□□□□□ -0.43
TRAIP-210ENST00000489948 DCST2Q5T1A1 773 aa12.36□□□□□ -0.43
TRAIP-210ENST00000489948 HLA-DQA1Q5Y7H0 255 aa12.36□□□□□ -0.43
TRAIP-210ENST00000489948 LCN8Q6JVE9 175 aa12.36□□□□□ -0.43
TRAIP-210ENST00000489948 REEP3Q6NUK4 255 aa12.36□□□□□ -0.43
TRAIP-210ENST00000489948 LRRC74BQ6ZQY2 392 aa12.36□□□□□ -0.43
TRAIP-210ENST00000489948 CCDC80Q76M96 950 aa12.36□□□□□ -0.43
TRAIP-210ENST00000489948 C16orf62Q7Z3J2 963 aa12.36□□□□□ -0.43
TRAIP-210ENST00000489948 WDR53Q7Z5U6 358 aaPredicted RBP12.36□□□□□ -0.43
TRAIP-210ENST00000489948 SLC44A2Q8IWA5 706 aaPredicted RBP12.36□□□□□ -0.43
TRAIP-210ENST00000489948 RNF148Q8N7C7 305 aa12.36□□□□□ -0.43
TRAIP-210ENST00000489948 BBS10Q8TAM1 723 aa12.36□□□□□ -0.43
TRAIP-210ENST00000489948 FAM110BQ8TC76 370 aa12.36□□□□□ -0.43
TRAIP-210ENST00000489948 GPR151Q8TDV0 419 aa12.36□□□□□ -0.43
TRAIP-210ENST00000489948 SLC38A5Q8WUX1 472 aa12.36□□□□□ -0.43
TRAIP-210ENST00000489948 PMM1Q92871 262 aa12.36□□□□□ -0.43
TRAIP-210ENST00000489948 RAB8BQ92930 207 aa12.36□□□□□ -0.43
TRAIP-210ENST00000489948 MAL2Q969L2 176 aa12.36□□□□□ -0.43
TRAIP-210ENST00000489948 TMEM19Q96HH6 336 aa12.36□□□□□ -0.43
TRAIP-210ENST00000489948 GAL3ST4Q96RP7 486 aa12.36□□□□□ -0.43
TRAIP-210ENST00000489948 DEFB126Q9BYW3 111 aa12.36□□□□□ -0.43
TRAIP-210ENST00000489948 NXF5Q9H1B4 397 aaKnown RBP12.36□□□□□ -0.43
TRAIP-210ENST00000489948 ACTR3BQ9P1U1 418 aa12.36□□□□□ -0.43
TRAIP-210ENST00000489948 GMPR2Q9P2T1 348 aaKnown RBP12.36□□□□□ -0.43
TRAIP-210ENST00000489948 MYOTQ9UBF9 498 aa12.36□□□□□ -0.43
TRAIP-210ENST00000489948 POLHQ9Y253 713 aa12.36□□□□□ -0.43
TRAIP-210ENST00000489948 DOCK10Q96BY6 2186 aa12.36□□□□□ -0.43
TRAIP-210ENST00000489948 MED19A0JLT2 244 aaPredicted RBP12.35□□□□□ -0.43
TRAIP-210ENST00000489948 CDC14CA4D256 554 aa12.35□□□□□ -0.43
TRAIP-210ENST00000489948 CDK2AP1O14519 115 aa12.35□□□□□ -0.43
TRAIP-210ENST00000489948 ACOT8O14734 319 aa12.35□□□□□ -0.43
TRAIP-210ENST00000489948 ARPC2O15144 300 aa12.35□□□□□ -0.43
TRAIP-210ENST00000489948 KLK10O43240 276 aa12.35□□□□□ -0.43
TRAIP-210ENST00000489948 KIAA0513O60268 411 aa12.35□□□□□ -0.43
TRAIP-210ENST00000489948 NME6O75414 186 aaPredicted RBP12.35□□□□□ -0.43
TRAIP-210ENST00000489948 KCNK2O95069 426 aa12.35□□□□□ -0.43
TRAIP-210ENST00000489948 BCHEP06276 602 aa12.35□□□□□ -0.43
TRAIP-210ENST00000489948 CHRM4P08173 479 aa12.35□□□□□ -0.43
TRAIP-210ENST00000489948 GABRA3P34903 492 aa12.35□□□□□ -0.43
TRAIP-210ENST00000489948 PSMD4P55036 377 aaKnown RBP12.35□□□□□ -0.43
TRAIP-210ENST00000489948 NRG3P56975 720 aa12.35□□□□□ -0.43
TRAIP-210ENST00000489948 MRPS22P82650 360 aaKnown RBP12.35□□□□□ -0.43
TRAIP-210ENST00000489948 HPCAP84074 193 aa12.35□□□□□ -0.43
TRAIP-210ENST00000489948 Q0VFX4 171 aa12.35□□□□□ -0.43
TRAIP-210ENST00000489948 ELOAQ14241 798 aaKnown RBP12.35□□□□□ -0.43
TRAIP-210ENST00000489948 IFNEQ86WN2 208 aa12.35□□□□□ -0.43
TRAIP-210ENST00000489948 PROSER1Q86XN7 944 aa12.35□□□□□ -0.43
TRAIP-210ENST00000489948 TAGAPQ8N103 731 aa12.35□□□□□ -0.43
TRAIP-210ENST00000489948 SLC34A3Q8N130 599 aa12.35□□□□□ -0.43
TRAIP-210ENST00000489948 SLC5A8Q8N695 610 aa12.35□□□□□ -0.43
TRAIP-210ENST00000489948 SLC15A4Q8N697 577 aa12.35□□□□□ -0.43
TRAIP-210ENST00000489948 CLEC1AQ8NC01 280 aa12.35□□□□□ -0.43
TRAIP-210ENST00000489948 NFKBIDQ8NI38 313 aa12.35□□□□□ -0.43
TRAIP-210ENST00000489948 XAGE5Q8WWM1 108 aa12.35□□□□□ -0.43
TRAIP-210ENST00000489948 PIK3R3Q92569 461 aa12.35□□□□□ -0.43
TRAIP-210ENST00000489948 POP5Q969H6 163 aaKnown RBP12.35□□□□□ -0.43
TRAIP-210ENST00000489948 CCDC124Q96CT7 223 aaKnown RBP12.35□□□□□ -0.43
TRAIP-210ENST00000489948 OTUB1Q96FW1 271 aaPredicted RBP12.35□□□□□ -0.43
TRAIP-210ENST00000489948 TREX2Q9BQ50 279 aaPredicted RBP12.35□□□□□ -0.43
TRAIP-210ENST00000489948 G6PC3Q9BUM1 346 aa12.35□□□□□ -0.43
TRAIP-210ENST00000489948 SAP130Q9H0E3 1048 aa12.35□□□□□ -0.43
TRAIP-210ENST00000489948 SLC38A1Q9H2H9 487 aa12.35□□□□□ -0.43
TRAIP-210ENST00000489948 RUBCNLQ9H714 662 aa12.35□□□□□ -0.43
TRAIP-210ENST00000489948 GORASP2Q9H8Y8 452 aa12.35□□□□□ -0.43
TRAIP-210ENST00000489948 MRTO4Q9UKD2 239 aaKnown RBP12.35□□□□□ -0.43
TRAIP-210ENST00000489948 PACSIN3Q9UKS6 424 aa12.35□□□□□ -0.43
TRAIP-210ENST00000489948 CBLCQ9ULV8 474 aa12.35□□□□□ -0.43
TRAIP-210ENST00000489948 USP22Q9UPT9 525 aa12.35□□□□□ -0.43
TRAIP-210ENST00000489948 POMPQ9Y244 141 aa12.35□□□□□ -0.43
TRAIP-210ENST00000489948 PCDHGA10Q9Y5H3 936 aa12.35□□□□□ -0.43
TRAIP-210ENST00000489948 KCNE3Q9Y6H6 103 aa12.35□□□□□ -0.43
TRAIP-210ENST00000489948 A0A0G2JPF8 293 aa12.34□□□□□ -0.43
TRAIP-210ENST00000489948 GXYLT2A0PJZ3 443 aa12.34□□□□□ -0.43
TRAIP-210ENST00000489948 HNRNPCL2B2RXH8 293 aa12.34□□□□□ -0.43
TRAIP-210ENST00000489948 HNRNPCL3B7ZW38 293 aa12.34□□□□□ -0.43
TRAIP-210ENST00000489948 C5orf58C9J3I9 102 aa12.34□□□□□ -0.43
TRAIP-210ENST00000489948 CXCR6O00574 342 aa12.34□□□□□ -0.43
TRAIP-210ENST00000489948 EFSO43281 561 aa12.34□□□□□ -0.43
TRAIP-210ENST00000489948 SLC28A2O43868 658 aa12.34□□□□□ -0.43
TRAIP-210ENST00000489948 ABCB7O75027 752 aa12.34□□□□□ -0.43
TRAIP-210ENST00000489948 STX11O75558 287 aa12.34□□□□□ -0.43
TRAIP-210ENST00000489948 PDE9AO76083 593 aa12.34□□□□□ -0.43
TRAIP-210ENST00000489948 ZIC2O95409 532 aaPredicted RBP12.34□□□□□ -0.43
TRAIP-210ENST00000489948 NADKO95544 446 aaPredicted RBP12.34□□□□□ -0.43
TRAIP-210ENST00000489948 IL33O95760 270 aa12.34□□□□□ -0.43
TRAIP-210ENST00000489948 CELA2AP08217 269 aa12.34□□□□□ -0.43
TRAIP-210ENST00000489948 HNRNPCL4P0DMR1 293 aa12.34□□□□□ -0.43
TRAIP-210ENST00000489948 NR2F1P10589 423 aa12.34□□□□□ -0.43
TRAIP-210ENST00000489948 ITGAMP11215 1152 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms