RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 LRIT3Q3SXY7 679 aa3.49□□□□□ -1.85
CCDC39-206ENST00000489868 GPBP1Q86WP2 473 aa3.49□□□□□ -1.85
CCDC39-206ENST00000489868 TSPAN18Q96SJ8 248 aa3.49□□□□□ -1.85
CCDC39-206ENST00000489868 COQ7Q99807 217 aa3.49□□□□□ -1.85
CCDC39-206ENST00000489868 TSSK1BQ9BXA7 367 aa3.49□□□□□ -1.85
CCDC39-206ENST00000489868 EXOSC3Q9NQT5 275 aaKnown RBP3.49□□□□□ -1.85
CCDC39-206ENST00000489868 DCAF13Q9NV06 445 aaKnown RBP3.49□□□□□ -1.85
CCDC39-206ENST00000489868 DHRS7Q9Y394 339 aa3.49□□□□□ -1.85
CCDC39-206ENST00000489868 TRBV7-9A0A0J9YWB2 115 aa3.48□□□□□ -1.85
CCDC39-206ENST00000489868 WI2-2373I1.2A0A1W2PRP0 233 aa3.48□□□□□ -1.85
CCDC39-206ENST00000489868 NPIPA2E9PIF3 369 aa3.48□□□□□ -1.85
CCDC39-206ENST00000489868 SERF1AO75920 110 aa3.48□□□□□ -1.85
CCDC39-206ENST00000489868 PNPP00491 289 aa3.48□□□□□ -1.85
CCDC39-206ENST00000489868 IGHV3-23P01764 117 aa3.48□□□□□ -1.85
CCDC39-206ENST00000489868 MGMTP16455 207 aa3.48□□□□□ -1.85
CCDC39-206ENST00000489868 ZP3P21754 424 aa3.48□□□□□ -1.85
CCDC39-206ENST00000489868 SLC6A8P48029 635 aa3.48□□□□□ -1.85
CCDC39-206ENST00000489868 P2RY4P51582 365 aa3.48□□□□□ -1.85
CCDC39-206ENST00000489868 SSTP61278 116 aa3.48□□□□□ -1.85
CCDC39-206ENST00000489868 RPS6P62753 249 aaKnown RBP3.48□□□□□ -1.85
CCDC39-206ENST00000489868 NOP14P78316 857 aaKnown RBP3.48□□□□□ -1.85
CCDC39-206ENST00000489868 RAB35Q15286 201 aa3.48□□□□□ -1.85
CCDC39-206ENST00000489868 C2orf76Q3KRA6 126 aa3.48□□□□□ -1.85
CCDC39-206ENST00000489868 PAGE2BQ5JRK9 111 aa3.48□□□□□ -1.85
CCDC39-206ENST00000489868 PARGQ86W56 976 aa3.48□□□□□ -1.85
CCDC39-206ENST00000489868 TGIF2LYQ8IUE0 185 aa3.48□□□□□ -1.85
CCDC39-206ENST00000489868 MCOLN2Q8IZK6 566 aa3.48□□□□□ -1.85
CCDC39-206ENST00000489868 SPC24Q8NBT2 197 aa3.48□□□□□ -1.85
CCDC39-206ENST00000489868 EXOC6Q8TAG9 804 aa3.48□□□□□ -1.85
CCDC39-206ENST00000489868 NMUR2Q9GZQ4 415 aa3.48□□□□□ -1.85
CCDC39-206ENST00000489868 DDX47Q9H0S4 455 aaKnown RBP3.48□□□□□ -1.85
CCDC39-206ENST00000489868 TRIM10Q9UDY6 481 aa3.48□□□□□ -1.85
CCDC39-206ENST00000489868 FZR1Q9UM11 496 aa3.48□□□□□ -1.85
CCDC39-206ENST00000489868 MTF2Q9Y483 593 aaPredicted RBP3.48□□□□□ -1.85
CCDC39-206ENST00000489868 FLVCR1Q9Y5Y0 555 aa3.48□□□□□ -1.85
CCDC39-206ENST00000489868 FKBP7Q9Y680 259 aa3.48□□□□□ -1.85
CCDC39-206ENST00000489868 TRBV2A0A0J9YWF9 115 aa3.47□□□□□ -1.85
CCDC39-206ENST00000489868 RTL8CO15255 209 aa3.47□□□□□ -1.85
CCDC39-206ENST00000489868 PGK2P07205 417 aa3.47□□□□□ -1.85
CCDC39-206ENST00000489868 CCDC166P0CW27 439 aa3.47□□□□□ -1.85
CCDC39-206ENST00000489868 MAGEA4P43358 317 aa3.47□□□□□ -1.85
CCDC39-206ENST00000489868 TRPC1P48995 793 aa3.47□□□□□ -1.85
CCDC39-206ENST00000489868 YBEYP58557 167 aaPredicted RBP3.47□□□□□ -1.85
CCDC39-206ENST00000489868 GNB2P62879 340 aa3.47□□□□□ -1.85
CCDC39-206ENST00000489868 ARF5P84085 180 aa3.47□□□□□ -1.85
CCDC39-206ENST00000489868 ZP4Q12836 540 aa3.47□□□□□ -1.85
CCDC39-206ENST00000489868 NME3Q13232 169 aa3.47□□□□□ -1.85
CCDC39-206ENST00000489868 LEG1Q6P5S2 330 aa3.47□□□□□ -1.85
CCDC39-206ENST00000489868 ZNF530Q6P9A1 599 aaPredicted RBP3.47□□□□□ -1.85
CCDC39-206ENST00000489868 GOLGA7Q7Z5G4 137 aa3.47□□□□□ -1.85
CCDC39-206ENST00000489868 CENPSQ8N2Z9 138 aa3.47□□□□□ -1.85
CCDC39-206ENST00000489868 ARFGAP2Q8N6H7 521 aa3.47□□□□□ -1.85
CCDC39-206ENST00000489868 URGCPQ8TCY9 931 aa3.47□□□□□ -1.85
CCDC39-206ENST00000489868 ARNTL2Q8WYA1 636 aa3.47□□□□□ -1.85
CCDC39-206ENST00000489868 C18orf25Q96B23 403 aaPredicted RBP3.47□□□□□ -1.85
CCDC39-206ENST00000489868 EEF2KMTQ96G04 330 aa3.47□□□□□ -1.85
CCDC39-206ENST00000489868 C16orf74Q96GX8 76 aa3.47□□□□□ -1.85
CCDC39-206ENST00000489868 PLEKHF1Q96S99 279 aa3.47□□□□□ -1.85
CCDC39-206ENST00000489868 CARD6Q9BX69 1037 aa3.47□□□□□ -1.85
CCDC39-206ENST00000489868 ELOVL2Q9NXB9 296 aa3.47□□□□□ -1.85
CCDC39-206ENST00000489868 PRO0461Q9UI25 63 aa3.47□□□□□ -1.85
CCDC39-206ENST00000489868 DNPEPQ9ULA0 475 aa3.47□□□□□ -1.85
CCDC39-206ENST00000489868 CHD4Q14839 1912 aa3.46□□□□□ -1.85
CCDC39-206ENST00000489868 FBLL1A6NHQ2 334 aaKnown RBP3.46□□□□□ -1.86
CCDC39-206ENST00000489868 KERAO60938 352 aa3.46□□□□□ -1.86
CCDC39-206ENST00000489868 HSF2BPO75031 334 aa3.46□□□□□ -1.86
CCDC39-206ENST00000489868 STAM2O75886 525 aa3.46□□□□□ -1.86
CCDC39-206ENST00000489868 CXCL10P02778 98 aa3.46□□□□□ -1.86
CCDC39-206ENST00000489868 COPB2P35606 906 aa3.46□□□□□ -1.86
CCDC39-206ENST00000489868 OR3A4PP47883 348 aa3.46□□□□□ -1.86
CCDC39-206ENST00000489868 DIO3P55073 304 aa3.46□□□□□ -1.86
CCDC39-206ENST00000489868 RPS8P62241 208 aaKnown RBP3.46□□□□□ -1.86
CCDC39-206ENST00000489868 OVGP1Q12889 678 aa3.46□□□□□ -1.86
CCDC39-206ENST00000489868 PRR4Q16378 134 aa3.46□□□□□ -1.86
CCDC39-206ENST00000489868 CAMK4Q16566 473 aa3.46□□□□□ -1.86
CCDC39-206ENST00000489868 CARTPTQ16568 116 aa3.46□□□□□ -1.86
CCDC39-206ENST00000489868 DMKNQ6E0U4 476 aaPredicted RBP3.46□□□□□ -1.86
CCDC39-206ENST00000489868 IGFL2Q6UWQ7 119 aa3.46□□□□□ -1.86
CCDC39-206ENST00000489868 ZNF562Q6V9R5 426 aa3.46□□□□□ -1.86
CCDC39-206ENST00000489868 C14orf178Q8N769 122 aaPredicted RBP3.46□□□□□ -1.86
CCDC39-206ENST00000489868 OR2L5Q8NG80 312 aa3.46□□□□□ -1.86
CCDC39-206ENST00000489868 WDR36Q8NI36 951 aaKnown RBP3.46□□□□□ -1.86
CCDC39-206ENST00000489868 ZNF285Q96NJ3 590 aa3.46□□□□□ -1.86
CCDC39-206ENST00000489868 ATP6V0BQ99437 205 aa3.46□□□□□ -1.86
CCDC39-206ENST00000489868 ASB8Q9H765 288 aa3.46□□□□□ -1.86
CCDC39-206ENST00000489868 ADAM22Q9P0K1 906 aa3.46□□□□□ -1.86
CCDC39-206ENST00000489868 MTRRQ9UBK8 725 aa3.46□□□□□ -1.86
CCDC39-206ENST00000489868 DUSP12Q9UNI6 340 aa3.46□□□□□ -1.86
CCDC39-206ENST00000489868 MEGF6O75095 1541 aa3.45□□□□□ -1.86
CCDC39-206ENST00000489868 LRRK1Q38SD2 2015 aa3.45□□□□□ -1.86
CCDC39-206ENST00000489868 ZNF861PO60384 105 aa3.45□□□□□ -1.86
CCDC39-206ENST00000489868 AKT2P31751 481 aa3.45□□□□□ -1.86
CCDC39-206ENST00000489868 RIPK4P57078 832 aa3.45□□□□□ -1.86
CCDC39-206ENST00000489868 PARP6Q2NL67 630 aa3.45□□□□□ -1.86
CCDC39-206ENST00000489868 BEND6Q5SZJ8 279 aaPredicted RBP3.45□□□□□ -1.86
CCDC39-206ENST00000489868 FAM159AQ6UWV7 190 aa3.45□□□□□ -1.86
CCDC39-206ENST00000489868 SCARA5Q6ZMJ2 495 aa3.45□□□□□ -1.86
CCDC39-206ENST00000489868 CSNK1A1LQ8N752 337 aa3.45□□□□□ -1.86
CCDC39-206ENST00000489868 CCNYQ8ND76 341 aa3.45□□□□□ -1.86
CCDC39-206ENST00000489868 ADIPOR1Q96A54 375 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms