RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 CFL2Q9Y281 166 aa10.65□□□□□ -0.7
ACTN4-206ENST00000489451 WIF1Q9Y5W5 379 aa10.65□□□□□ -0.7
ACTN4-206ENST00000489451 NSD1Q96L73 2696 aaPredicted RBP10.65□□□□□ -0.7
ACTN4-206ENST00000489451 FN1P02751 2386 aaKnown RBP10.65□□□□□ -0.71
ACTN4-206ENST00000489451 A8MXE2 369 aa10.64□□□□□ -0.71
ACTN4-206ENST00000489451 H0Y3Z8 333 aa10.64□□□□□ -0.71
ACTN4-206ENST00000489451 DLX3O60479 287 aa10.64□□□□□ -0.71
ACTN4-206ENST00000489451 TCEA1P23193 301 aaKnown RBP10.64□□□□□ -0.71
ACTN4-206ENST00000489451 SRD5A2P31213 254 aa10.64□□□□□ -0.71
ACTN4-206ENST00000489451 DEKP35659 375 aaKnown RBP10.64□□□□□ -0.71
ACTN4-206ENST00000489451 DCAF7P61962 342 aa10.64□□□□□ -0.71
ACTN4-206ENST00000489451 CLCQ05315 142 aa10.64□□□□□ -0.71
ACTN4-206ENST00000489451 RCAN2Q14206 197 aa10.64□□□□□ -0.71
ACTN4-206ENST00000489451 ZNF678Q5SXM1 525 aa10.64□□□□□ -0.71
ACTN4-206ENST00000489451 C6orf163Q5TEZ5 329 aa10.64□□□□□ -0.71
ACTN4-206ENST00000489451 CAMKMTQ7Z624 323 aa10.64□□□□□ -0.71
ACTN4-206ENST00000489451 IFNEQ86WN2 208 aa10.64□□□□□ -0.71
ACTN4-206ENST00000489451 KIF18BQ86Y91 864 aa10.64□□□□□ -0.71
ACTN4-206ENST00000489451 OR14L1PQ8NHC6 308 aa10.64□□□□□ -0.71
ACTN4-206ENST00000489451 WNT2BQ93097 391 aa10.64□□□□□ -0.71
ACTN4-206ENST00000489451 LRRC46Q96FV0 321 aa10.64□□□□□ -0.71
ACTN4-206ENST00000489451 ADOQ96SZ5 270 aa10.64□□□□□ -0.71
ACTN4-206ENST00000489451 TXLNGYQ9BZA5 131 aa10.64□□□□□ -0.71
ACTN4-206ENST00000489451 FOLH1BQ9HBA9 442 aa10.64□□□□□ -0.71
ACTN4-206ENST00000489451 TAS2R10Q9NYW0 307 aa10.64□□□□□ -0.71
ACTN4-206ENST00000489451 VPS29Q9UBQ0 182 aa10.64□□□□□ -0.71
ACTN4-206ENST00000489451 PRODH2Q9UF12 536 aa10.64□□□□□ -0.71
ACTN4-206ENST00000489451 DCDC2Q9UHG0 476 aa10.64□□□□□ -0.71
ACTN4-206ENST00000489451 MCM8Q9UJA3 840 aa10.64□□□□□ -0.71
ACTN4-206ENST00000489451 SNX6Q9UNH7 406 aa10.64□□□□□ -0.71
ACTN4-206ENST00000489451 DLGAP4Q9Y2H0 992 aa10.64□□□□□ -0.71
ACTN4-206ENST00000489451 TESMINQ9Y4I5 508 aa10.64□□□□□ -0.71
ACTN4-206ENST00000489451 FBN1P35555 2871 aaKnown RBP10.64□□□□□ -0.71
ACTN4-206ENST00000489451 STAB1Q9NY15 2570 aa10.63□□□□□ -0.71
ACTN4-206ENST00000489451 A0A1W2PNV4 684 aa10.63□□□□□ -0.71
ACTN4-206ENST00000489451 SH3D21A4FU49 640 aa10.63□□□□□ -0.71
ACTN4-206ENST00000489451 H0YC42 278 aa10.63□□□□□ -0.71
ACTN4-206ENST00000489451 PCDH7O60245 1069 aa10.63□□□□□ -0.71
ACTN4-206ENST00000489451 GUCY1B2O75343 617 aa10.63□□□□□ -0.71
ACTN4-206ENST00000489451 ERN1O75460 977 aaKnown RBP10.63□□□□□ -0.71
ACTN4-206ENST00000489451 REM1O75628 298 aa10.63□□□□□ -0.71
ACTN4-206ENST00000489451 GSTA1P08263 222 aa10.63□□□□□ -0.71
ACTN4-206ENST00000489451 GRK2P25098 689 aa10.63□□□□□ -0.71
ACTN4-206ENST00000489451 TPD52P55327 224 aaPredicted RBP10.63□□□□□ -0.71
ACTN4-206ENST00000489451 PSG6Q00889 435 aa10.63□□□□□ -0.71
ACTN4-206ENST00000489451 KEAP1Q14145 624 aa10.63□□□□□ -0.71
ACTN4-206ENST00000489451 SF3B4Q15427 424 aaKnown RBP eCLIP10.63□□□□□ -0.715e-8■■■■■ 43.3
ACTN4-206ENST00000489451 VWA1Q6PCB0 445 aa10.63□□□□□ -0.71
ACTN4-206ENST00000489451 GSPT2Q8IYD1 628 aaKnown RBP10.63□□□□□ -0.71
ACTN4-206ENST00000489451 FADS6Q8N9I5 356 aa10.63□□□□□ -0.71
ACTN4-206ENST00000489451 C16orf78Q8WTQ4 265 aa10.63□□□□□ -0.71
ACTN4-206ENST00000489451 EXOSC8Q96B26 276 aaKnown RBP10.63□□□□□ -0.71
ACTN4-206ENST00000489451 EFHD2Q96C19 240 aaPredicted RBP10.63□□□□□ -0.71
ACTN4-206ENST00000489451 ZFP3Q96NJ6 502 aa10.63□□□□□ -0.71
ACTN4-206ENST00000489451 DACH2Q96NX9 599 aa10.63□□□□□ -0.71
ACTN4-206ENST00000489451 KCNA7Q96RP8 456 aa10.63□□□□□ -0.71
ACTN4-206ENST00000489451 ZNF382Q96SR6 550 aa10.63□□□□□ -0.71
ACTN4-206ENST00000489451 EBPLQ9BY08 206 aa10.63□□□□□ -0.71
ACTN4-206ENST00000489451 TBK1Q9UHD2 729 aa10.63□□□□□ -0.71
ACTN4-206ENST00000489451 JMJD1CQ15652 2540 aa10.63□□□□□ -0.71
ACTN4-206ENST00000489451 COL6A5A8TX70 2615 aa10.62□□□□□ -0.71
ACTN4-206ENST00000489451 DEFB108AA8MXU0 73 aa10.62□□□□□ -0.71
ACTN4-206ENST00000489451 PLOD3O60568 738 aa10.62□□□□□ -0.71
ACTN4-206ENST00000489451 SUPT7LO94864 414 aa10.62□□□□□ -0.71
ACTN4-206ENST00000489451 GOSR1O95249 250 aa10.62□□□□□ -0.71
ACTN4-206ENST00000489451 HSD3B1P14060 373 aa10.62□□□□□ -0.71
ACTN4-206ENST00000489451 CHMP24386 653 aa10.62□□□□□ -0.71
ACTN4-206ENST00000489451 HSD3B2P26439 372 aa10.62□□□□□ -0.71
ACTN4-206ENST00000489451 LOXP28300 417 aaPredicted RBP10.62□□□□□ -0.71
ACTN4-206ENST00000489451 ADSLP30566 484 aaPredicted RBP10.62□□□□□ -0.71
ACTN4-206ENST00000489451 TIA1P31483 386 aaKnown RBP eCLIP10.62□□□□□ -0.71
ACTN4-206ENST00000489451 CCT5P48643 541 aa10.62□□□□□ -0.71
ACTN4-206ENST00000489451 SUCLG1P53597 346 aaKnown RBP10.62□□□□□ -0.71
ACTN4-206ENST00000489451 FOXA1P55317 472 aa10.62□□□□□ -0.71
ACTN4-206ENST00000489451 FAM27E3Q08E93 113 aa10.62□□□□□ -0.71
ACTN4-206ENST00000489451 CSTF3Q12996 717 aaKnown RBP10.62□□□□□ -0.71
ACTN4-206ENST00000489451 ZNF474Q6S9Z5 364 aaPredicted RBP10.62□□□□□ -0.71
ACTN4-206ENST00000489451 SCIMPQ6UWF3 145 aa10.62□□□□□ -0.71
ACTN4-206ENST00000489451 ENPP6Q6UWR7 440 aa10.62□□□□□ -0.71
ACTN4-206ENST00000489451 CLEC9AQ6UXN8 241 aa10.62□□□□□ -0.71
ACTN4-206ENST00000489451 C22orf34Q6ZV56 151 aa10.62□□□□□ -0.71
ACTN4-206ENST00000489451 SLC22A9Q8IVM8 553 aa10.62□□□□□ -0.71
ACTN4-206ENST00000489451 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.62□□□□□ -0.71
ACTN4-206ENST00000489451 SMPDL3BQ92485 455 aa10.62□□□□□ -0.71
ACTN4-206ENST00000489451 FIG4Q92562 907 aa10.62□□□□□ -0.71
ACTN4-206ENST00000489451 STARD4Q96DR4 205 aa10.62□□□□□ -0.71
ACTN4-206ENST00000489451 CCDC126Q96EE4 140 aa10.62□□□□□ -0.71
ACTN4-206ENST00000489451 MARK4Q96L34 752 aa10.62□□□□□ -0.71
ACTN4-206ENST00000489451 SFXN2Q96NB2 322 aa10.62□□□□□ -0.71
ACTN4-206ENST00000489451 TM9SF2Q99805 663 aa10.62□□□□□ -0.71
ACTN4-206ENST00000489451 FAIM2Q9BWQ8 316 aa10.62□□□□□ -0.71
ACTN4-206ENST00000489451 TNFRSF12AQ9NP84 129 aa10.62□□□□□ -0.71
ACTN4-206ENST00000489451 SLC35C2Q9NQQ7 365 aa10.62□□□□□ -0.71
ACTN4-206ENST00000489451 NMRK1Q9NWW6 199 aa10.62□□□□□ -0.71
ACTN4-206ENST00000489451 C6orf203Q9P0P8 240 aaPredicted RBP10.62□□□□□ -0.71
ACTN4-206ENST00000489451 PACSIN3Q9UKS6 424 aa10.62□□□□□ -0.71
ACTN4-206ENST00000489451 MRPS18CQ9Y3D5 142 aaKnown RBP10.62□□□□□ -0.71
ACTN4-206ENST00000489451 TIMM22Q9Y584 194 aa10.62□□□□□ -0.71
ACTN4-206ENST00000489451 ZNF780BQ9Y6R6 833 aa10.62□□□□□ -0.71
ACTN4-206ENST00000489451 HEATR5AQ86XA9 2040 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms