RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 LPAR4Q99677 370 aa19.37■□□□□ 0.69
SND1-214ENST00000489417 WDR77Q9BQA1 342 aaPredicted RBP19.37■□□□□ 0.69
SND1-214ENST00000489417 SPATA5L1Q9BVQ7 753 aa19.37■□□□□ 0.69
SND1-214ENST00000489417 Q9N2J8 555 aa19.37■□□□□ 0.69
SND1-214ENST00000489417 RIMS3Q9UJD0 308 aa19.37■□□□□ 0.69
SND1-214ENST00000489417 WDR45Q9Y484 360 aa19.37■□□□□ 0.69
SND1-214ENST00000489417 LOC102723996A0A087X1L8 192 aa19.36■□□□□ 0.69
SND1-214ENST00000489417 OR6C76A6NM76 312 aa19.36■□□□□ 0.69
SND1-214ENST00000489417 PCDH17O14917 1159 aa19.36■□□□□ 0.69
SND1-214ENST00000489417 ZIC2O95409 532 aaPredicted RBP19.36■□□□□ 0.69
SND1-214ENST00000489417 IGHEP01854 428 aa19.36■□□□□ 0.69
SND1-214ENST00000489417 MT-ND1P03886 318 aa19.36■□□□□ 0.69
SND1-214ENST00000489417 CT45A8P0DMV1 189 aa19.36■□□□□ 0.69
SND1-214ENST00000489417 CT45A9P0DMV2 189 aa19.36■□□□□ 0.69
SND1-214ENST00000489417 TCN2P20062 427 aa19.36■□□□□ 0.69
SND1-214ENST00000489417 CD247P20963 164 aa19.36■□□□□ 0.69
SND1-214ENST00000489417 GPR143P51810 404 aa19.36■□□□□ 0.69
SND1-214ENST00000489417 CT45A2Q5DJT8 189 aa19.36■□□□□ 0.69
SND1-214ENST00000489417 TMPRSS7Q7RTY8 843 aa19.36■□□□□ 0.69
SND1-214ENST00000489417 NLGN4XQ8N0W4 816 aa19.36■□□□□ 0.69
SND1-214ENST00000489417 SMYD1Q8NB12 490 aa19.36■□□□□ 0.69
SND1-214ENST00000489417 B3GNT7Q8NFL0 401 aa19.36■□□□□ 0.69
SND1-214ENST00000489417 NLGN4YQ8NFZ3 816 aaPredicted RBP19.36■□□□□ 0.69
SND1-214ENST00000489417 C8orf44Q96CB5 159 aa19.36■□□□□ 0.69
SND1-214ENST00000489417 RMND5BQ96G75 393 aaPredicted RBP19.36■□□□□ 0.69
SND1-214ENST00000489417 ZNF350Q9GZX5 532 aa19.36■□□□□ 0.69
SND1-214ENST00000489417 DLL3Q9NYJ7 618 aa19.36■□□□□ 0.69
SND1-214ENST00000489417 SEC14L3Q9UDX4 400 aa19.36■□□□□ 0.69
SND1-214ENST00000489417 PPIEQ9UNP9 301 aaKnown RBP19.36■□□□□ 0.69
SND1-214ENST00000489417 GPR55Q9Y2T6 319 aaPredicted RBP19.36■□□□□ 0.69
SND1-214ENST00000489417 FCMRO60667 390 aa19.35■□□□□ 0.69
SND1-214ENST00000489417 RAD1O60671 282 aa19.35■□□□□ 0.69
SND1-214ENST00000489417 STX11O75558 287 aa19.35■□□□□ 0.69
SND1-214ENST00000489417 SEC24DO94855 1032 aaPredicted RBP19.35■□□□□ 0.69
SND1-214ENST00000489417 KCNK2O95069 426 aa19.35■□□□□ 0.69
SND1-214ENST00000489417 ALPPP05187 535 aa19.35■□□□□ 0.69
SND1-214ENST00000489417 FASP25445 335 aa19.35■□□□□ 0.69
SND1-214ENST00000489417 PPICP45877 212 aa19.35■□□□□ 0.69
SND1-214ENST00000489417 DCAF7P61962 342 aa19.35■□□□□ 0.69
SND1-214ENST00000489417 KCNJ10P78508 379 aa19.35■□□□□ 0.69
SND1-214ENST00000489417 EBPQ15125 230 aaKnown RBP19.35■□□□□ 0.69
SND1-214ENST00000489417 IFI44LQ53G44 452 aa19.35■□□□□ 0.69
SND1-214ENST00000489417 TYW3Q6IPR3 259 aaKnown RBP19.35■□□□□ 0.69
SND1-214ENST00000489417 FIGNL1Q6PIW4 674 aa19.35■□□□□ 0.69
SND1-214ENST00000489417 SLC29A4Q7RTT9 530 aa19.35■□□□□ 0.69
SND1-214ENST00000489417 C9orf40Q8IXQ3 194 aa19.35■□□□□ 0.69
SND1-214ENST00000489417 TMEM102Q8N9M5 508 aaPredicted RBP19.35■□□□□ 0.69
SND1-214ENST00000489417 RASSF5Q8WWW0 418 aa19.35■□□□□ 0.69
SND1-214ENST00000489417 POLE3Q9NRF9 147 aa19.35■□□□□ 0.69
SND1-214ENST00000489417 BAG5Q9UL15 447 aa19.35■□□□□ 0.69
SND1-214ENST00000489417 FARSAQ9Y285 508 aaKnown RBP19.35■□□□□ 0.69
SND1-214ENST00000489417 OR10H1Q9Y4A9 318 aa19.35■□□□□ 0.69
SND1-214ENST00000489417 RBMS1P29558 406 aaKnown RBP19.34■□□□□ 0.69
SND1-214ENST00000489417 MAGEA2P43356 314 aa19.34■□□□□ 0.69
SND1-214ENST00000489417 RPS15P62841 145 aaKnown RBP19.34■□□□□ 0.69
SND1-214ENST00000489417 NNATQ16517 81 aa19.34■□□□□ 0.69
SND1-214ENST00000489417 HLA-DQA1Q5Y7H0 255 aa19.34■□□□□ 0.69
SND1-214ENST00000489417 HMBOX1Q6NT76 420 aa19.34■□□□□ 0.69
SND1-214ENST00000489417 ZDHHC21Q8IVQ6 265 aa19.34■□□□□ 0.69
SND1-214ENST00000489417 OR4N2Q8NGD1 307 aa19.34■□□□□ 0.69
SND1-214ENST00000489417 SPPL2AQ8TCT8 520 aa19.34■□□□□ 0.69
SND1-214ENST00000489417 ADIPOR1Q96A54 375 aa19.34■□□□□ 0.69
SND1-214ENST00000489417 VMP1Q96GC9 406 aa19.34■□□□□ 0.69
SND1-214ENST00000489417 GAL3ST4Q96RP7 486 aa19.34■□□□□ 0.69
SND1-214ENST00000489417 SEMA4CQ9C0C4 833 aa19.34■□□□□ 0.69
SND1-214ENST00000489417 SAP130Q9H0E3 1048 aa19.34■□□□□ 0.69
SND1-214ENST00000489417 MTHFD2LQ9H903 347 aaPredicted RBP19.34■□□□□ 0.69
SND1-214ENST00000489417 AGPAT4Q9NRZ5 378 aa19.34■□□□□ 0.69
SND1-214ENST00000489417 TCFL5Q9UL49 500 aa19.34■□□□□ 0.69
SND1-214ENST00000489417 MKLN1Q9UL63 735 aa19.34■□□□□ 0.69
SND1-214ENST00000489417 CBLCQ9ULV8 474 aa19.34■□□□□ 0.69
SND1-214ENST00000489417 C2orf92A0A1B0GVN3 265 aa19.34■□□□□ 0.69
SND1-214ENST00000489417 FRG2CA6NGY1 282 aa19.34■□□□□ 0.69
SND1-214ENST00000489417 STMND1H3BQB6 276 aa19.34■□□□□ 0.69
SND1-214ENST00000489417 GUSBP08236 651 aa19.34■□□□□ 0.69
SND1-214ENST00000489417 DRD5P21918 477 aa19.34■□□□□ 0.69
SND1-214ENST00000489417 GCKP35557 465 aa19.34■□□□□ 0.69
SND1-214ENST00000489417 STAT5AP42229 794 aa19.34■□□□□ 0.69
SND1-214ENST00000489417 KCNJ5P48544 419 aa19.34■□□□□ 0.69
SND1-214ENST00000489417 SLC26A5P58743 744 aa19.34■□□□□ 0.69
SND1-214ENST00000489417 DNASE1L3Q13609 305 aa19.34■□□□□ 0.69
SND1-214ENST00000489417 PCOLCEQ15113 449 aa19.34■□□□□ 0.69
SND1-214ENST00000489417 ATP6AP1Q15904 470 aa19.34■□□□□ 0.69
SND1-214ENST00000489417 DUSP7Q16829 419 aa19.34■□□□□ 0.69
SND1-214ENST00000489417 HMGN2P46Q86SG4 172 aa19.34■□□□□ 0.69
SND1-214ENST00000489417 AMIGO2Q86SJ2 522 aa19.34■□□□□ 0.69
SND1-214ENST00000489417 ZNF619Q8N2I2 560 aa19.34■□□□□ 0.69
SND1-214ENST00000489417 ZSCAN1Q8NBB4 408 aa19.34■□□□□ 0.69
SND1-214ENST00000489417 GPR32P1Q8NGA4 272 aa19.34■□□□□ 0.69
SND1-214ENST00000489417 LCORQ96JN0 433 aaPredicted RBP19.34■□□□□ 0.69
SND1-214ENST00000489417 WWTR1Q9GZV5 400 aa19.34■□□□□ 0.69
SND1-214ENST00000489417 QRSL1Q9H0R6 528 aaKnown RBP19.34■□□□□ 0.69
SND1-214ENST00000489417 TRIM45Q9H8W5 580 aaPredicted RBP19.34■□□□□ 0.69
SND1-214ENST00000489417 CACYBPQ9HB71 228 aaKnown RBP19.34■□□□□ 0.69
SND1-214ENST00000489417 IL1RAPQ9NPH3 570 aa19.34■□□□□ 0.69
SND1-214ENST00000489417 FBXO34Q9NWN3 711 aa19.34■□□□□ 0.69
SND1-214ENST00000489417 HS3ST3B1Q9Y662 390 aa19.34■□□□□ 0.69
SND1-214ENST00000489417 C21orf140B9A014 251 aa19.33■□□□□ 0.68
SND1-214ENST00000489417 CASQ2O14958 399 aaPredicted RBP19.33■□□□□ 0.68
SND1-214ENST00000489417 KIAA0513O60268 411 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms