RNA–Protein interactions for RNA: ENST00000489274.1

NINJ1-204, Transcript of ninjurin 1, humanhuman

TSL 2

Gene NINJ1, Length 2,026 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-204ENST00000489274 TRAM2Q15035 370 aa13.59□□□□□ -0.23
NINJ1-204ENST00000489274 DEFB133Q30KQ1 61 aa13.59□□□□□ -0.23
NINJ1-204ENST00000489274 ENTPD8Q5MY95 495 aa13.59□□□□□ -0.23
NINJ1-204ENST00000489274 TMEM236Q5W0B7 351 aa13.59□□□□□ -0.23
NINJ1-204ENST00000489274 NLGN4XQ8N0W4 816 aa13.59□□□□□ -0.23
NINJ1-204ENST00000489274 CLIP4Q8N3C7 705 aa13.59□□□□□ -0.23
NINJ1-204ENST00000489274 TRUB1Q8WWH5 349 aaKnown RBP13.59□□□□□ -0.23
NINJ1-204ENST00000489274 FCGR1BQ92637 280 aa13.59□□□□□ -0.23
NINJ1-204ENST00000489274 DIO2Q92813 273 aa13.59□□□□□ -0.23
NINJ1-204ENST00000489274 SLC38A4Q969I6 547 aa13.59□□□□□ -0.23
NINJ1-204ENST00000489274 CD180Q99467 661 aa13.59□□□□□ -0.23
NINJ1-204ENST00000489274 DUSP15Q9H1R2 295 aaPredicted RBP13.59□□□□□ -0.23
NINJ1-204ENST00000489274 ENPP5Q9UJA9 477 aa13.59□□□□□ -0.23
NINJ1-204ENST00000489274 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.58□□□□□ -0.24
NINJ1-204ENST00000489274 A0A1W2PPW3 197 aa13.58□□□□□ -0.24
NINJ1-204ENST00000489274 CTNSO60931 367 aa13.58□□□□□ -0.24
NINJ1-204ENST00000489274 STX11O75558 287 aa13.58□□□□□ -0.24
NINJ1-204ENST00000489274 MED26O95402 600 aa13.58□□□□□ -0.24
NINJ1-204ENST00000489274 TP53P04637 393 aaPredicted RBP13.58□□□□□ -0.24
NINJ1-204ENST00000489274 CT62P0C5K7 136 aa13.58□□□□□ -0.24
NINJ1-204ENST00000489274 GSTM3P21266 225 aa13.58□□□□□ -0.24
NINJ1-204ENST00000489274 BCKDHBP21953 392 aa13.58□□□□□ -0.24
NINJ1-204ENST00000489274 RPS4Y1P22090 263 aaKnown RBP13.58□□□□□ -0.24
NINJ1-204ENST00000489274 MMP11P24347 488 aa13.58□□□□□ -0.24
NINJ1-204ENST00000489274 POU1F1P28069 291 aa13.58□□□□□ -0.24
NINJ1-204ENST00000489274 IFNGR2P38484 337 aa13.58□□□□□ -0.24
NINJ1-204ENST00000489274 CSNK1EP49674 416 aaKnown RBP13.58□□□□□ -0.24
NINJ1-204ENST00000489274 ZP2Q05996 745 aa13.58□□□□□ -0.24
NINJ1-204ENST00000489274 ST3GAL3Q11203 375 aa13.58□□□□□ -0.24
NINJ1-204ENST00000489274 TCTE1Q5JU00 501 aa13.58□□□□□ -0.24
NINJ1-204ENST00000489274 UBE2UQ5VVX9 321 aa13.58□□□□□ -0.24
NINJ1-204ENST00000489274 C12orf73Q69YU5 71 aa13.58□□□□□ -0.24
NINJ1-204ENST00000489274 PTCHD4Q6ZW05 846 aa13.58□□□□□ -0.24
NINJ1-204ENST00000489274 ZNF595Q8IYB9 648 aa13.58□□□□□ -0.24
NINJ1-204ENST00000489274 ZNF619Q8N2I2 560 aa13.58□□□□□ -0.24
NINJ1-204ENST00000489274 OR6C4Q8NGE1 309 aa13.58□□□□□ -0.24
NINJ1-204ENST00000489274 YIPF6Q96EC8 236 aa13.58□□□□□ -0.24
NINJ1-204ENST00000489274 ZDHHC12Q96GR4 267 aa13.58□□□□□ -0.24
NINJ1-204ENST00000489274 POLE3Q9NRF9 147 aa13.58□□□□□ -0.24
NINJ1-204ENST00000489274 CLN6Q9NWW5 311 aa13.58□□□□□ -0.24
NINJ1-204ENST00000489274 MRPS33Q9Y291 106 aaKnown RBP13.58□□□□□ -0.24
NINJ1-204ENST00000489274 GON4LQ3T8J9 2241 aa13.58□□□□□ -0.24
NINJ1-204ENST00000489274 NINQ8N4C6 2090 aa13.58□□□□□ -0.24
NINJ1-204ENST00000489274 HYKKA2RU49 373 aa13.57□□□□□ -0.24
NINJ1-204ENST00000489274 FADS2O95864 444 aaKnown RBP13.57□□□□□ -0.24
NINJ1-204ENST00000489274 DBIP07108 87 aaKnown RBP13.57□□□□□ -0.24
NINJ1-204ENST00000489274 GUSBP08236 651 aa13.57□□□□□ -0.24
NINJ1-204ENST00000489274 CCNYL3P0C7X3 344 aa13.57□□□□□ -0.24
NINJ1-204ENST00000489274 EMP3P54852 163 aa13.57□□□□□ -0.24
NINJ1-204ENST00000489274 C21orf59P57076 290 aa13.57□□□□□ -0.24
NINJ1-204ENST00000489274 EEF1A1P68104 462 aaKnown RBP13.57□□□□□ -0.24
NINJ1-204ENST00000489274 IGLV3-21P80748 117 aaPredicted RBP13.57□□□□□ -0.24
NINJ1-204ENST00000489274 NFATC3Q12968 1075 aa13.57□□□□□ -0.24
NINJ1-204ENST00000489274 EIPR1Q53HC9 387 aa13.57□□□□□ -0.24
NINJ1-204ENST00000489274 WDR45BQ5MNZ6 344 aa13.57□□□□□ -0.24
NINJ1-204ENST00000489274 DCST2Q5T1A1 773 aa13.57□□□□□ -0.24
NINJ1-204ENST00000489274 SLC16A12Q6ZSM3 486 aa13.57□□□□□ -0.24
NINJ1-204ENST00000489274 TOR1AIP2Q8NFQ8 470 aa13.57□□□□□ -0.24
NINJ1-204ENST00000489274 PDE7BQ9NP56 450 aa13.57□□□□□ -0.24
NINJ1-204ENST00000489274 UCKL1Q9NWZ5 548 aa13.57□□□□□ -0.24
NINJ1-204ENST00000489274 SLC6A14Q9UN76 642 aa13.57□□□□□ -0.24
NINJ1-204ENST00000489274 A0A087WUU8 490 aa13.57□□□□□ -0.24
NINJ1-204ENST00000489274 FITM1A5D6W6 292 aa13.57□□□□□ -0.24
NINJ1-204ENST00000489274 RHPN2P1A8MT19 583 aa13.57□□□□□ -0.24
NINJ1-204ENST00000489274 STK25O00506 426 aa13.57□□□□□ -0.24
NINJ1-204ENST00000489274 AP3D1O14617 1153 aa13.57□□□□□ -0.24
NINJ1-204ENST00000489274 BCAT2O15382 392 aaPredicted RBP13.57□□□□□ -0.24
NINJ1-204ENST00000489274 FRS3O43559 492 aa13.57□□□□□ -0.24
NINJ1-204ENST00000489274 COQ9O75208 318 aa13.57□□□□□ -0.24
NINJ1-204ENST00000489274 NKX2-2O95096 273 aa13.57□□□□□ -0.24
NINJ1-204ENST00000489274 OR5F1O95221 314 aa13.57□□□□□ -0.24
NINJ1-204ENST00000489274 CBX7O95931 251 aa13.57□□□□□ -0.24
NINJ1-204ENST00000489274 S1PR1P21453 382 aa13.57□□□□□ -0.24
NINJ1-204ENST00000489274 MLLT3P42568 568 aaPredicted RBP13.57□□□□□ -0.24
NINJ1-204ENST00000489274 ST13P50502 369 aaKnown RBP13.57□□□□□ -0.24
NINJ1-204ENST00000489274 AFF3P51826 1226 aaKnown RBP13.57□□□□□ -0.24
NINJ1-204ENST00000489274 RGS8P57771 180 aaPredicted RBP13.57□□□□□ -0.24
NINJ1-204ENST00000489274 ZNF836Q6ZNA1 936 aa13.57□□□□□ -0.24
NINJ1-204ENST00000489274 UBALD2Q8IYN6 164 aa13.57□□□□□ -0.24
NINJ1-204ENST00000489274 CARFQ8N187 725 aa13.57□□□□□ -0.24
NINJ1-204ENST00000489274 VWA5B2Q8N398 1253 aa13.57□□□□□ -0.24
NINJ1-204ENST00000489274 COX18Q8N8Q8 333 aa13.57□□□□□ -0.24
NINJ1-204ENST00000489274 GNPDA2Q8TDQ7 276 aa13.57□□□□□ -0.24
NINJ1-204ENST00000489274 DOK4Q8TEW6 326 aa13.57□□□□□ -0.24
NINJ1-204ENST00000489274 TGM7Q96PF1 710 aa13.57□□□□□ -0.24
NINJ1-204ENST00000489274 DCUN1D5Q9BTE7 237 aa13.57□□□□□ -0.24
NINJ1-204ENST00000489274 PRR14Q9BWN1 585 aa13.57□□□□□ -0.24
NINJ1-204ENST00000489274 ENAMQ9NRM1 1142 aa13.57□□□□□ -0.24
NINJ1-204ENST00000489274 SEMA4GQ9NTN9 838 aa13.57□□□□□ -0.24
NINJ1-204ENST00000489274 CNOT2Q9NZN8 540 aaKnown RBP13.57□□□□□ -0.24
NINJ1-204ENST00000489274 TMEM131Q92545 1883 aa13.56□□□□□ -0.24
NINJ1-204ENST00000489274 IGHV5-51A0A0C4DH38 117 aa13.56□□□□□ -0.24
NINJ1-204ENST00000489274 EFCAB10A6NFE3 127 aa13.56□□□□□ -0.24
NINJ1-204ENST00000489274 H3BN98 237 aa13.56□□□□□ -0.24
NINJ1-204ENST00000489274 TNRC18O15417 2968 aaPredicted RBP13.56□□□□□ -0.24
NINJ1-204ENST00000489274 OR10H2O60403 315 aa13.56□□□□□ -0.24
NINJ1-204ENST00000489274 ZBTB11O95625 1053 aaPredicted RBP13.56□□□□□ -0.24
NINJ1-204ENST00000489274 ALDH4A1P30038 563 aa13.56□□□□□ -0.24
NINJ1-204ENST00000489274 TRHRP34981 398 aaPredicted RBP13.56□□□□□ -0.24
NINJ1-204ENST00000489274 AVPR1BP47901 424 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms