RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 EFHD2Q96C19 240 aaPredicted RBP22.79■■□□□ 1.24
HMGN1-217ENST00000489072 PKNOX2Q96KN3 472 aa22.79■■□□□ 1.24
HMGN1-217ENST00000489072 TIMP4Q99727 224 aa22.79■■□□□ 1.24
HMGN1-217ENST00000489072 TRIM8Q9BZR9 551 aa22.79■■□□□ 1.24
HMGN1-217ENST00000489072 REEP4Q9H6H4 257 aa22.79■■□□□ 1.24
HMGN1-217ENST00000489072 RUBCNLQ9H714 662 aa22.79■■□□□ 1.24
HMGN1-217ENST00000489072 SERHLQ9NQF3 203 aa22.79■■□□□ 1.24
HMGN1-217ENST00000489072 DDX18Q9NVP1 670 aaKnown RBP22.79■■□□□ 1.24
HMGN1-217ENST00000489072 Q9UFV3 132 aa22.79■■□□□ 1.24
HMGN1-217ENST00000489072 ZDHHC2Q9UIJ5 367 aa22.79■■□□□ 1.24
HMGN1-217ENST00000489072 KIAA1549Q9HCM3 1950 aa22.78■■□□□ 1.24
HMGN1-217ENST00000489072 RGS16O15492 202 aaPredicted RBP22.78■■□□□ 1.24
HMGN1-217ENST00000489072 TBX19O60806 448 aa22.78■■□□□ 1.24
HMGN1-217ENST00000489072 TOXO94900 526 aa22.78■■□□□ 1.24
HMGN1-217ENST00000489072 HOXD4P09016 255 aaPredicted RBP22.78■■□□□ 1.24
HMGN1-217ENST00000489072 BCKDHAP12694 445 aa22.78■■□□□ 1.24
HMGN1-217ENST00000489072 GABRA1P14867 456 aa22.78■■□□□ 1.24
HMGN1-217ENST00000489072 IL12BP29460 328 aa22.78■■□□□ 1.24
HMGN1-217ENST00000489072 KRT20P35900 424 aa22.78■■□□□ 1.24
HMGN1-217ENST00000489072 PNLIPRP2P54317 469 aa22.78■■□□□ 1.24
HMGN1-217ENST00000489072 PSPHP78330 225 aa22.78■■□□□ 1.24
HMGN1-217ENST00000489072 TFF3Q07654 80 aa22.78■■□□□ 1.24
HMGN1-217ENST00000489072 HSPB3Q12988 150 aa22.78■■□□□ 1.24
HMGN1-217ENST00000489072 PDE7AQ13946 482 aa22.78■■□□□ 1.24
HMGN1-217ENST00000489072 EFR3AQ14156 821 aa22.78■■□□□ 1.24
HMGN1-217ENST00000489072 DCST1Q5T197 706 aa22.78■■□□□ 1.24
HMGN1-217ENST00000489072 VASNQ6EMK4 673 aa22.78■■□□□ 1.24
HMGN1-217ENST00000489072 SEM1Q6ZVN7 128 aa22.78■■□□□ 1.24
HMGN1-217ENST00000489072 YRDCQ86U90 279 aaKnown RBP22.78■■□□□ 1.24
HMGN1-217ENST00000489072 EXOC3L1Q86VI1 746 aa22.78■■□□□ 1.24
HMGN1-217ENST00000489072 ZNF295-AS1Q8N0V1 137 aa22.78■■□□□ 1.24
HMGN1-217ENST00000489072 ZBTB9Q96C00 473 aa22.78■■□□□ 1.24
HMGN1-217ENST00000489072 C3orf30Q96M34 536 aa22.78■■□□□ 1.24
HMGN1-217ENST00000489072 ENKD1Q9H0I2 346 aa22.78■■□□□ 1.24
HMGN1-217ENST00000489072 OR10H1Q9Y4A9 318 aa22.78■■□□□ 1.24
HMGN1-217ENST00000489072 PDZD2O15018 2839 aa22.78■■□□□ 1.24
HMGN1-217ENST00000489072 POLQO75417 2590 aa22.78■■□□□ 1.24
HMGN1-217ENST00000489072 KDM4EB2RXH2 506 aaPredicted RBP22.77■■□□□ 1.24
HMGN1-217ENST00000489072 CTIFO43310 598 aaKnown RBP22.77■■□□□ 1.24
HMGN1-217ENST00000489072 CYP4B1P13584 511 aa22.77■■□□□ 1.24
HMGN1-217ENST00000489072 BMP7P18075 431 aa22.77■■□□□ 1.24
HMGN1-217ENST00000489072 NHSL2Q5HYW2 709 aa22.77■■□□□ 1.24
HMGN1-217ENST00000489072 HOMEZQ8IX15 550 aa22.77■■□□□ 1.24
HMGN1-217ENST00000489072 PPCDCQ96CD2 204 aa22.77■■□□□ 1.24
HMGN1-217ENST00000489072 UGT2B28Q9BY64 529 aa22.77■■□□□ 1.24
HMGN1-217ENST00000489072 NPDC1Q9NQX5 325 aaPredicted RBP22.77■■□□□ 1.24
HMGN1-217ENST00000489072 WIF1Q9Y5W5 379 aa22.77■■□□□ 1.24
HMGN1-217ENST00000489072 PCNX3Q9H6A9 2034 aa22.76■■□□□ 1.23
HMGN1-217ENST00000489072 C17orf51A8MQB3 221 aa22.76■■□□□ 1.23
HMGN1-217ENST00000489072 B4DXG7 233 aa22.76■■□□□ 1.23
HMGN1-217ENST00000489072 PEX11AO75192 247 aa22.76■■□□□ 1.23
HMGN1-217ENST00000489072 IFI6P09912 130 aa22.76■■□□□ 1.23
HMGN1-217ENST00000489072 FRKP42685 505 aaPredicted RBP22.76■■□□□ 1.23
HMGN1-217ENST00000489072 SERPINB4P48594 390 aa22.76■■□□□ 1.23
HMGN1-217ENST00000489072 GAS1P54826 345 aa22.76■■□□□ 1.23
HMGN1-217ENST00000489072 GAB1Q13480 694 aa22.76■■□□□ 1.23
HMGN1-217ENST00000489072 CYP27C1Q4G0S4 372 aa22.76■■□□□ 1.23
HMGN1-217ENST00000489072 LIX1LQ8IVB5 337 aa22.76■■□□□ 1.23
HMGN1-217ENST00000489072 NUDCD3Q8IVD9 361 aa22.76■■□□□ 1.23
HMGN1-217ENST00000489072 PPP3R2Q96LZ3 170 aa22.76■■□□□ 1.23
HMGN1-217ENST00000489072 SPOCK3Q9BQ16 436 aa22.76■■□□□ 1.23
HMGN1-217ENST00000489072 TREX2Q9BQ50 279 aaPredicted RBP22.76■■□□□ 1.23
HMGN1-217ENST00000489072 LMF2Q9BU23 707 aaKnown RBP22.76■■□□□ 1.23
HMGN1-217ENST00000489072 PRDM14Q9GZV8 571 aa22.76■■□□□ 1.23
HMGN1-217ENST00000489072 SH3BP4Q9P0V3 963 aa22.76■■□□□ 1.23
HMGN1-217ENST00000489072 NUP214P35658 2090 aaPredicted RBP22.75■■□□□ 1.23
HMGN1-217ENST00000489072 SKAP2O75563 359 aaPredicted RBP22.75■■□□□ 1.23
HMGN1-217ENST00000489072 LYPLA1O75608 230 aaPredicted RBP22.75■■□□□ 1.23
HMGN1-217ENST00000489072 CBR3O75828 277 aa22.75■■□□□ 1.23
HMGN1-217ENST00000489072 ASMTP46597 345 aa22.75■■□□□ 1.23
HMGN1-217ENST00000489072 ZFP36L2P47974 494 aaKnown RBP22.75■■□□□ 1.23
HMGN1-217ENST00000489072 ACSF3Q4G176 576 aaPredicted RBP22.75■■□□□ 1.23
HMGN1-217ENST00000489072 TNFAIP8L3Q5GJ75 292 aa22.75■■□□□ 1.23
HMGN1-217ENST00000489072 RIPPLY2Q5TAB7 128 aa22.75■■□□□ 1.23
HMGN1-217ENST00000489072 MEX3BQ6ZN04 569 aaKnown RBP22.75■■□□□ 1.23
HMGN1-217ENST00000489072 GDF7Q7Z4P5 450 aa22.75■■□□□ 1.23
HMGN1-217ENST00000489072 PLCZ1Q86YW0 608 aa22.75■■□□□ 1.23
HMGN1-217ENST00000489072 ZIM3Q96PE6 472 aa22.75■■□□□ 1.23
HMGN1-217ENST00000489072 OR2B2Q9GZK3 357 aa22.75■■□□□ 1.23
HMGN1-217ENST00000489072 ZNF395Q9H8N7 513 aaPredicted RBP22.75■■□□□ 1.23
HMGN1-217ENST00000489072 SSU72Q9NP77 194 aaKnown RBP22.75■■□□□ 1.23
HMGN1-217ENST00000489072 KCNJ16Q9NPI9 418 aa22.75■■□□□ 1.23
HMGN1-217ENST00000489072 FLRT3Q9NZU0 649 aa22.75■■□□□ 1.23
HMGN1-217ENST00000489072 FBXL2Q9UKC9 423 aa22.75■■□□□ 1.23
HMGN1-217ENST00000489072 CBLCQ9ULV8 474 aa22.75■■□□□ 1.23
HMGN1-217ENST00000489072 WDR91A4D1P6 747 aa22.74■■□□□ 1.23
HMGN1-217ENST00000489072 AHRRA9YTQ3 701 aa22.74■■□□□ 1.23
HMGN1-217ENST00000489072 ITM2AO43736 263 aa22.74■■□□□ 1.23
HMGN1-217ENST00000489072 IGFBP2P18065 325 aa22.74■■□□□ 1.23
HMGN1-217ENST00000489072 EFNA1P20827 205 aaPredicted RBP22.74■■□□□ 1.23
HMGN1-217ENST00000489072 WNT3P56703 355 aa22.74■■□□□ 1.23
HMGN1-217ENST00000489072 C6orf136Q5SQH8 315 aa22.74■■□□□ 1.23
HMGN1-217ENST00000489072 CEP85LQ5SZL2 805 aa22.74■■□□□ 1.23
HMGN1-217ENST00000489072 OR5M10Q6IEU7 315 aa22.74■■□□□ 1.23
HMGN1-217ENST00000489072 ABTB1Q969K4 478 aaPredicted RBP22.74■■□□□ 1.23
HMGN1-217ENST00000489072 WDYHV1Q96HA8 205 aa22.74■■□□□ 1.23
HMGN1-217ENST00000489072 C1orf50Q9BV19 199 aa22.74■■□□□ 1.23
HMGN1-217ENST00000489072 EQTNQ9NQ60 294 aa22.74■■□□□ 1.23
HMGN1-217ENST00000489072 CAMK2AQ9UQM7 478 aa22.74■■□□□ 1.23
HMGN1-217ENST00000489072 DOCK7Q96N67 2140 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms