RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 OR7A2PQ8NGA2 310 aa13.08□□□□□ -0.32
BRCA1-218ENST00000489037 PHF10Q8WUB8 498 aaKnown RBP13.08□□□□□ -0.32
BRCA1-218ENST00000489037 PHF12Q96QT6 1004 aa13.08□□□□□ -0.32
BRCA1-218ENST00000489037 NODALQ96S42 347 aa13.08□□□□□ -0.32
BRCA1-218ENST00000489037 C20orf27Q9GZN8 174 aa13.08□□□□□ -0.32
BRCA1-218ENST00000489037 MANSC1Q9H8J5 431 aa13.08□□□□□ -0.32
BRCA1-218ENST00000489037 AKTIPQ9H8T0 292 aa13.08□□□□□ -0.32
BRCA1-218ENST00000489037 ACKR4Q9NPB9 350 aa13.08□□□□□ -0.32
BRCA1-218ENST00000489037 EQTNQ9NQ60 294 aa13.08□□□□□ -0.32
BRCA1-218ENST00000489037 HAO1Q9UJM8 370 aa13.08□□□□□ -0.32
BRCA1-218ENST00000489037 CBLCQ9ULV8 474 aa13.08□□□□□ -0.32
BRCA1-218ENST00000489037 LRRC3CA6NJW4 275 aa13.07□□□□□ -0.32
BRCA1-218ENST00000489037 FIGNL2A6NMB9 653 aa13.07□□□□□ -0.32
BRCA1-218ENST00000489037 SLCO1B7G3V0H7 640 aa13.07□□□□□ -0.32
BRCA1-218ENST00000489037 TSPAN2O60636 221 aa13.07□□□□□ -0.32
BRCA1-218ENST00000489037 ICOSLGO75144 302 aa13.07□□□□□ -0.32
BRCA1-218ENST00000489037 NME6O75414 186 aaPredicted RBP13.07□□□□□ -0.32
BRCA1-218ENST00000489037 KCNH1O95259 989 aa13.07□□□□□ -0.32
BRCA1-218ENST00000489037 CELA3AP09093 270 aa13.07□□□□□ -0.32
BRCA1-218ENST00000489037 RFPL3SP0C7P2 107 aa13.07□□□□□ -0.32
BRCA1-218ENST00000489037 G6PDP11413 515 aa13.07□□□□□ -0.32
BRCA1-218ENST00000489037 LBPP18428 481 aa13.07□□□□□ -0.32
BRCA1-218ENST00000489037 GABRA3P34903 492 aa13.07□□□□□ -0.32
BRCA1-218ENST00000489037 FRKP42685 505 aaPredicted RBP13.07□□□□□ -0.32
BRCA1-218ENST00000489037 PRIM2P49643 509 aa13.07□□□□□ -0.32
BRCA1-218ENST00000489037 CLDN8P56748 225 aa13.07□□□□□ -0.32
BRCA1-218ENST00000489037 PSG6Q00889 435 aa13.07□□□□□ -0.32
BRCA1-218ENST00000489037 MLC1Q15049 377 aa13.07□□□□□ -0.32
BRCA1-218ENST00000489037 GXYLT1Q4G148 440 aa13.07□□□□□ -0.32
BRCA1-218ENST00000489037 ZNF585AQ6P3V2 769 aa13.07□□□□□ -0.32
BRCA1-218ENST00000489037 NPSR1Q6W5P4 371 aa13.07□□□□□ -0.32
BRCA1-218ENST00000489037 LRRC34Q8IZ02 419 aa13.07□□□□□ -0.32
BRCA1-218ENST00000489037 CDRT4Q8N9R6 151 aa13.07□□□□□ -0.32
BRCA1-218ENST00000489037 OR5P2Q8WZ92 322 aa13.07□□□□□ -0.32
BRCA1-218ENST00000489037 EFHD2Q96C19 240 aaPredicted RBP13.07□□□□□ -0.32
BRCA1-218ENST00000489037 GNRHR2Q96P88 292 aa13.07□□□□□ -0.32
BRCA1-218ENST00000489037 LMF2Q9BU23 707 aaKnown RBP13.07□□□□□ -0.32
BRCA1-218ENST00000489037 NUF2Q9BZD4 464 aa13.07□□□□□ -0.32
BRCA1-218ENST00000489037 DPY30Q9C005 99 aa13.07□□□□□ -0.32
BRCA1-218ENST00000489037 SDHAF3Q9NRP4 125 aa13.07□□□□□ -0.32
BRCA1-218ENST00000489037 PNPOQ9NVS9 261 aa13.07□□□□□ -0.32
BRCA1-218ENST00000489037 ASIC5Q9NY37 505 aa13.07□□□□□ -0.32
BRCA1-218ENST00000489037 COQ3Q9NZJ6 369 aa13.07□□□□□ -0.32
BRCA1-218ENST00000489037 C15orf41Q9Y2V0 281 aa13.07□□□□□ -0.32
BRCA1-218ENST00000489037 LIPGQ9Y5X9 500 aa13.07□□□□□ -0.32
BRCA1-218ENST00000489037 SETXQ7Z333 2677 aaKnown RBP13.07□□□□□ -0.32
BRCA1-218ENST00000489037 COL12A1Q99715 3063 aa13.07□□□□□ -0.32
BRCA1-218ENST00000489037 CACNA1CQ13936 2221 aa13.07□□□□□ -0.32
BRCA1-218ENST00000489037 C15orf38-AP3S2A0A0A6YYH1 394 aa13.06□□□□□ -0.32
BRCA1-218ENST00000489037 TRPC5OSA6NMA1 111 aa13.06□□□□□ -0.32
BRCA1-218ENST00000489037 SNPHO15079 494 aa13.06□□□□□ -0.32
BRCA1-218ENST00000489037 CFLARO15519 480 aa13.06□□□□□ -0.32
BRCA1-218ENST00000489037 CBR3O75828 277 aa13.06□□□□□ -0.32
BRCA1-218ENST00000489037 PSMG1O95456 288 aa13.06□□□□□ -0.32
BRCA1-218ENST00000489037 CLDN1O95832 211 aa13.06□□□□□ -0.32
BRCA1-218ENST00000489037 LAMP1P11279 417 aa13.06□□□□□ -0.32
BRCA1-218ENST00000489037 AGAP20933 346 aa13.06□□□□□ -0.32
BRCA1-218ENST00000489037 RFX3P48380 749 aa13.06□□□□□ -0.32
BRCA1-218ENST00000489037 TRPC1P48995 793 aa13.06□□□□□ -0.32
BRCA1-218ENST00000489037 CDK9P50750 372 aaKnown RBP13.06□□□□□ -0.32
BRCA1-218ENST00000489037 GAB1Q13480 694 aa13.06□□□□□ -0.32
BRCA1-218ENST00000489037 ART3Q13508 389 aa13.06□□□□□ -0.32
BRCA1-218ENST00000489037 PGS1Q32NB8 556 aa13.06□□□□□ -0.32
BRCA1-218ENST00000489037 SPDYE7PQ495Y7 208 aa13.06□□□□□ -0.32
BRCA1-218ENST00000489037 DESI1Q6ICB0 168 aa13.06□□□□□ -0.32
BRCA1-218ENST00000489037 ZCCHC12Q6PEW1 402 aa13.06□□□□□ -0.32
BRCA1-218ENST00000489037 C3P1Q6ZMU1 363 aa13.06□□□□□ -0.32
BRCA1-218ENST00000489037 OR4N2Q8NGD1 307 aa13.06□□□□□ -0.32
BRCA1-218ENST00000489037 OR5M9Q8NGP3 310 aa13.06□□□□□ -0.32
BRCA1-218ENST00000489037 NEIL3Q8TAT5 605 aa13.06□□□□□ -0.32
BRCA1-218ENST00000489037 GPR151Q8TDV0 419 aa13.06□□□□□ -0.32
BRCA1-218ENST00000489037 ITLN2Q8WWU7 325 aaPredicted RBP13.06□□□□□ -0.32
BRCA1-218ENST00000489037 SLC9A6Q92581 669 aa13.06□□□□□ -0.32
BRCA1-218ENST00000489037 COQ8BQ96D53 544 aa13.06□□□□□ -0.32
BRCA1-218ENST00000489037 MS4A4EQ96PG1 132 aa13.06□□□□□ -0.32
BRCA1-218ENST00000489037 DUSP26Q9BV47 211 aa13.06□□□□□ -0.32
BRCA1-218ENST00000489037 BHLHE41Q9C0J9 482 aaPredicted RBP13.06□□□□□ -0.32
BRCA1-218ENST00000489037 SLC6A15Q9H2J7 730 aa13.06□□□□□ -0.32
BRCA1-218ENST00000489037 MEAF6Q9HAF1 191 aa13.06□□□□□ -0.32
BRCA1-218ENST00000489037 ALKBH4Q9NXW9 302 aa13.06□□□□□ -0.32
BRCA1-218ENST00000489037 PCDHGB4Q9UN71 923 aa13.06□□□□□ -0.32
BRCA1-218ENST00000489037 SNX8Q9Y5X2 465 aa13.06□□□□□ -0.32
BRCA1-218ENST00000489037 ARHGAP21Q5T5U3 1957 aa13.06□□□□□ -0.32
BRCA1-218ENST00000489037 C2orf72A6NCS6 295 aa13.05□□□□□ -0.32
BRCA1-218ENST00000489037 PRSS44E7EML9 344 aa13.05□□□□□ -0.32
BRCA1-218ENST00000489037 HDAC3O15379 428 aa13.05□□□□□ -0.32
BRCA1-218ENST00000489037 WDR1O75083 606 aa13.05□□□□□ -0.32
BRCA1-218ENST00000489037 HPNP05981 417 aa13.05□□□□□ -0.32
BRCA1-218ENST00000489037 HOXD4P09016 255 aaPredicted RBP13.05□□□□□ -0.32
BRCA1-218ENST00000489037 ALOX5P09917 674 aa13.05□□□□□ -0.32
BRCA1-218ENST00000489037 KITP10721 976 aa13.05□□□□□ -0.32
BRCA1-218ENST00000489037 CYP4B1P13584 511 aa13.05□□□□□ -0.32
BRCA1-218ENST00000489037 GABRA1P14867 456 aa13.05□□□□□ -0.32
BRCA1-218ENST00000489037 EFNA1P20827 205 aaPredicted RBP13.05□□□□□ -0.32
BRCA1-218ENST00000489037 ADORA2A-AS1P86434 159 aa13.05□□□□□ -0.32
BRCA1-218ENST00000489037 SF3B4Q15427 424 aaKnown RBP eCLIP13.05□□□□□ -0.32
BRCA1-218ENST00000489037 BHLHB9Q6PI77 547 aa13.05□□□□□ -0.32
BRCA1-218ENST00000489037 ACAD11Q709F0 780 aa13.05□□□□□ -0.32
BRCA1-218ENST00000489037 WDR53Q7Z5U6 358 aaPredicted RBP13.05□□□□□ -0.32
BRCA1-218ENST00000489037 KRTCAP2Q8N6L1 136 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms