RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 CCSER1Q9C0I3 900 aa2.15□□□□□ -2.07
R3HDM1-219ENST00000488035 ATG10Q9H0Y0 220 aa2.15□□□□□ -2.07
R3HDM1-219ENST00000488035 KAT8Q9H7Z6 458 aaKnown RBP2.15□□□□□ -2.07
R3HDM1-219ENST00000488035 TIGARQ9NQ88 270 aa2.15□□□□□ -2.07
R3HDM1-219ENST00000488035 CUTCQ9NTM9 273 aa2.15□□□□□ -2.07
R3HDM1-219ENST00000488035 FAM120CQ9NX05 1096 aaKnown RBP2.15□□□□□ -2.07
R3HDM1-219ENST00000488035 RAI14Q9P0K7 980 aa2.15□□□□□ -2.07
R3HDM1-219ENST00000488035 SLC2A6Q9UGQ3 507 aa2.15□□□□□ -2.07
R3HDM1-219ENST00000488035 CIDEBQ9UHD4 219 aa2.15□□□□□ -2.07
R3HDM1-219ENST00000488035 RSPH14Q9UHP6 348 aa2.15□□□□□ -2.07
R3HDM1-219ENST00000488035 BCAP29Q9UHQ4 241 aa2.15□□□□□ -2.07
R3HDM1-219ENST00000488035 ZNF490Q9ULM2 529 aaPredicted RBP2.15□□□□□ -2.07
R3HDM1-219ENST00000488035 NAALAD2Q9Y3Q0 740 aa2.15□□□□□ -2.07
R3HDM1-219ENST00000488035 POGZQ7Z3K3 1410 aa2.15□□□□□ -2.07
R3HDM1-219ENST00000488035 CFAP65Q6ZU64 1925 aaKnown RBP2.15□□□□□ -2.07
R3HDM1-219ENST00000488035 PARD3Q8TEW0 1356 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 CROCCQ5TZA2 2017 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 TTC26A0AVF1 554 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 WASHC1A8K0Z3 465 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 WASH3PC4AMC7 463 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 C19orf81C9J6K1 198 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 E9PMD0 336 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 C11orf98E9PRG8 122 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 SGK494L7N484 410 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 LGALS8O00214 317 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 RASGRF2O14827 1237 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 ALOX15BO15296 676 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 SSX5O60225 188 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 AKR7A3O95154 331 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 CA3P07451 260 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 UMPSP11172 480 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 IL10P22301 178 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 STK19P49842 368 aaPredicted RBP2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 GPC3P51654 580 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 GMFBP60983 142 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 RPS6P62753 249 aaKnown RBP2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 BNIP1Q12981 228 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 TFDP1Q14186 410 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 RAB35Q15286 201 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 MICAQ29983 383 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 BEND6Q5SZJ8 279 aaPredicted RBP2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 ATAD3CQ5T2N8 411 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 LEG1Q6P5S2 330 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 OLFM4Q6UX06 510 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 WASH2PQ6VEQ5 465 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 Q6ZR54 194 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 Q7L0L9 218 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 SYVN1Q86TM6 617 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 HSCBQ8IWL3 235 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 CERS5Q8N5B7 392 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 CD177Q8N6Q3 437 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 BCORP1Q8N888 145 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 SELENOMQ8WWX9 145 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 C14orf79Q96F83 325 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 TESK2Q96S53 571 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 TSPAN18Q96SJ8 248 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 KCNK16Q96T55 309 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 CARD6Q9BX69 1037 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 TM2D1Q9BX74 207 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 IKZF5Q9H5V7 419 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 GPN2Q9H9Y4 310 aaPredicted RBP2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 ACTR3BQ9P1U1 418 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 GHRLQ9UBU3 117 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 Q9UF83 564 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 FOXJ3Q9UPW0 622 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 NTNG1Q9Y2I2 539 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 ZNF318Q5VUA4 2279 aa2.14□□□□□ -2.07
R3HDM1-219ENST00000488035 IGHV3-35A0A0C4DH35 117 aa2.13□□□□□ -2.07
R3HDM1-219ENST00000488035 FAM230AA0A1W2PPH8 454 aa2.13□□□□□ -2.07
R3HDM1-219ENST00000488035 RGSL1A5PLK6 1076 aa2.13□□□□□ -2.07
R3HDM1-219ENST00000488035 TRIM49BA6NDI0 452 aa2.13□□□□□ -2.07
R3HDM1-219ENST00000488035 EFCAB7A8K855 629 aa2.13□□□□□ -2.07
R3HDM1-219ENST00000488035 A8MU10 97 aa2.13□□□□□ -2.07
R3HDM1-219ENST00000488035 SDHDO14521 159 aa2.13□□□□□ -2.07
R3HDM1-219ENST00000488035 CHADO15335 359 aa2.13□□□□□ -2.07
R3HDM1-219ENST00000488035 EFNA2O43921 213 aa2.13□□□□□ -2.07
R3HDM1-219ENST00000488035 SLC2A10O95528 541 aa2.13□□□□□ -2.07
R3HDM1-219ENST00000488035 ANXA4P09525 319 aaPredicted RBP2.13□□□□□ -2.07
R3HDM1-219ENST00000488035 SLC35G4P0C7Q5 338 aa2.13□□□□□ -2.07
R3HDM1-219ENST00000488035 PAICSP22234 425 aaKnown RBP2.13□□□□□ -2.07
R3HDM1-219ENST00000488035 PTBP1P26599 531 aaKnown RBP eCLIP2.13□□□□□ -2.075e-8■■■■■ 40.5
R3HDM1-219ENST00000488035 CYLC1P35663 651 aaPredicted RBP2.13□□□□□ -2.07
R3HDM1-219ENST00000488035 ALDH3B2P48448 385 aa2.13□□□□□ -2.07
R3HDM1-219ENST00000488035 NUMBP49757 651 aa2.13□□□□□ -2.07
R3HDM1-219ENST00000488035 PPIAP62937 165 aaKnown RBP2.13□□□□□ -2.07
R3HDM1-219ENST00000488035 HERVK_113P63132 956 aa2.13□□□□□ -2.07
R3HDM1-219ENST00000488035 ERVK-8P63133 956 aa2.13□□□□□ -2.07
R3HDM1-219ENST00000488035 IL18R1Q13478 541 aa2.13□□□□□ -2.07
R3HDM1-219ENST00000488035 EXOSC2Q13868 293 aaKnown RBP2.13□□□□□ -2.07
R3HDM1-219ENST00000488035 UBE2V2Q15819 145 aa2.13□□□□□ -2.07
R3HDM1-219ENST00000488035 CDKN3Q16667 212 aa2.13□□□□□ -2.07
R3HDM1-219ENST00000488035 CCDC92Q53HC0 331 aaPredicted RBP2.13□□□□□ -2.07
R3HDM1-219ENST00000488035 C12orf60Q5U649 245 aa2.13□□□□□ -2.07
R3HDM1-219ENST00000488035 ZNF57Q68EA5 555 aaPredicted RBP2.13□□□□□ -2.07
R3HDM1-219ENST00000488035 PAMR1Q6UXH9 720 aa2.13□□□□□ -2.07
R3HDM1-219ENST00000488035 UNC5DQ6UXZ4 953 aa2.13□□□□□ -2.07
R3HDM1-219ENST00000488035 NET1Q7Z628 596 aaPredicted RBP2.13□□□□□ -2.07
R3HDM1-219ENST00000488035 ZSCAN30Q86W11 494 aa2.13□□□□□ -2.07
R3HDM1-219ENST00000488035 MARCH9Q86YJ5 346 aa2.13□□□□□ -2.07
R3HDM1-219ENST00000488035 GPR65Q8IYL9 337 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms