RNA–Protein interactions for RNA: ENST00000487876.1

RPSA-208, Transcript of ribosomal protein SA, humanhuman

TSL 4

Gene RPSA, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-208ENST00000487876 BCKDKO14874 412 aa11.78□□□□□ -0.52
RPSA-208ENST00000487876 SCAMP2O15127 329 aaKnown RBP11.78□□□□□ -0.52
RPSA-208ENST00000487876 BIRC5O15392 142 aa11.78□□□□□ -0.52
RPSA-208ENST00000487876 HCN1O60741 890 aa11.78□□□□□ -0.52
RPSA-208ENST00000487876 TBX19O60806 448 aa11.78□□□□□ -0.52
RPSA-208ENST00000487876 TRAPPC6AO75865 159 aa11.78□□□□□ -0.52
RPSA-208ENST00000487876 SLITRK5O94991 958 aa11.78□□□□□ -0.52
RPSA-208ENST00000487876 AGAP20933 346 aa11.78□□□□□ -0.52
RPSA-208ENST00000487876 ACVR2AP27037 513 aa11.78□□□□□ -0.52
RPSA-208ENST00000487876 IL12BP29460 328 aa11.78□□□□□ -0.52
RPSA-208ENST00000487876 FRKP42685 505 aaPredicted RBP11.78□□□□□ -0.52
RPSA-208ENST00000487876 NUP107P57740 925 aa11.78□□□□□ -0.52
RPSA-208ENST00000487876 PMPCAQ10713 525 aa11.78□□□□□ -0.52
RPSA-208ENST00000487876 TOMM20Q15388 145 aa11.78□□□□□ -0.52
RPSA-208ENST00000487876 ATP6AP1LQ52LC2 224 aa11.78□□□□□ -0.52
RPSA-208ENST00000487876 BEND6Q5SZJ8 279 aaPredicted RBP11.78□□□□□ -0.52
RPSA-208ENST00000487876 DCST1Q5T197 706 aa11.78□□□□□ -0.52
RPSA-208ENST00000487876 IL23RQ5VWK5 629 aa11.78□□□□□ -0.52
RPSA-208ENST00000487876 TIGD3Q6B0B8 471 aa11.78□□□□□ -0.52
RPSA-208ENST00000487876 SP5Q6BEB4 398 aaPredicted RBP11.78□□□□□ -0.52
RPSA-208ENST00000487876 RTL6Q6ICC9 239 aa11.78□□□□□ -0.52
RPSA-208ENST00000487876 TMEM81Q6P7N7 255 aa11.78□□□□□ -0.52
RPSA-208ENST00000487876 LARP4Q71RC2 724 aaKnown RBP eCLIP11.78□□□□□ -0.526e-6■■■■□ 26.1
RPSA-208ENST00000487876 KRTCAP2Q8N6L1 136 aa11.78□□□□□ -0.52
RPSA-208ENST00000487876 FNDC5Q8NAU1 212 aa11.78□□□□□ -0.52
RPSA-208ENST00000487876 OR7A2PQ8NGA2 310 aa11.78□□□□□ -0.52
RPSA-208ENST00000487876 OR1J4Q8NGS1 313 aa11.78□□□□□ -0.52
RPSA-208ENST00000487876 FBXO30Q8TB52 745 aa11.78□□□□□ -0.52
RPSA-208ENST00000487876 SARAFQ96BY9 339 aa11.78□□□□□ -0.52
RPSA-208ENST00000487876 TUBGCP3Q96CW5 907 aa11.78□□□□□ -0.52
RPSA-208ENST00000487876 SERHLQ9NQF3 203 aa11.78□□□□□ -0.52
RPSA-208ENST00000487876 QPCTLQ9NXS2 382 aa11.78□□□□□ -0.52
RPSA-208ENST00000487876 SLC6A5Q9Y345 797 aa11.78□□□□□ -0.52
RPSA-208ENST00000487876 ACTL7BQ9Y614 415 aa11.78□□□□□ -0.52
RPSA-208ENST00000487876 INTS1Q8N201 2190 aaKnown RBP11.77□□□□□ -0.53
RPSA-208ENST00000487876 C15orf38-AP3S2A0A0A6YYH1 394 aa11.77□□□□□ -0.53
RPSA-208ENST00000487876 GXYLT2A0PJZ3 443 aa11.77□□□□□ -0.53
RPSA-208ENST00000487876 FIGNL2A6NMB9 653 aa11.77□□□□□ -0.53
RPSA-208ENST00000487876 KDM4EB2RXH2 506 aaPredicted RBP11.77□□□□□ -0.53
RPSA-208ENST00000487876 CLDN14O95500 239 aa11.77□□□□□ -0.53
RPSA-208ENST00000487876 HPNP05981 417 aa11.77□□□□□ -0.53
RPSA-208ENST00000487876 SNRPB2P08579 225 aaKnown RBP11.77□□□□□ -0.53
RPSA-208ENST00000487876 MYZAPP0CAP1 466 aa11.77□□□□□ -0.53
RPSA-208ENST00000487876 LAMP1P11279 417 aa11.77□□□□□ -0.53
RPSA-208ENST00000487876 CYP4B1P13584 511 aa11.77□□□□□ -0.53
RPSA-208ENST00000487876 MAPK1P28482 360 aa11.77□□□□□ -0.53
RPSA-208ENST00000487876 GPC1P35052 558 aa11.77□□□□□ -0.53
RPSA-208ENST00000487876 KRT20P35900 424 aa11.77□□□□□ -0.53
RPSA-208ENST00000487876 HPCAL1P37235 193 aa11.77□□□□□ -0.53
RPSA-208ENST00000487876 ASMTP46597 345 aa11.77□□□□□ -0.53
RPSA-208ENST00000487876 SLC1A6P48664 564 aa11.77□□□□□ -0.53
RPSA-208ENST00000487876 WDR4P57081 412 aaKnown RBP11.77□□□□□ -0.53
RPSA-208ENST00000487876 GAB1Q13480 694 aa11.77□□□□□ -0.53
RPSA-208ENST00000487876 ZNF630Q2M218 657 aaPredicted RBP11.77□□□□□ -0.53
RPSA-208ENST00000487876 WIPI1Q5MNZ9 446 aaPredicted RBP11.77□□□□□ -0.53
RPSA-208ENST00000487876 WLSQ5T9L3 541 aa11.77□□□□□ -0.53
RPSA-208ENST00000487876 SLC30A6Q6NXT4 461 aa11.77□□□□□ -0.53
RPSA-208ENST00000487876 SZRD1Q7Z422 152 aa11.77□□□□□ -0.53
RPSA-208ENST00000487876 CCDC71Q8IV32 467 aaPredicted RBP11.77□□□□□ -0.53
RPSA-208ENST00000487876 EID3Q8N140 333 aa11.77□□□□□ -0.53
RPSA-208ENST00000487876 WDSUB1Q8N9V3 476 aa11.77□□□□□ -0.53
RPSA-208ENST00000487876 FAM83FQ8NEG4 500 aaPredicted RBP11.77□□□□□ -0.53
RPSA-208ENST00000487876 RNF138Q8WVD3 245 aa11.77□□□□□ -0.53
RPSA-208ENST00000487876 TMCO6Q96DC7 493 aa11.77□□□□□ -0.53
RPSA-208ENST00000487876 OTUB1Q96FW1 271 aaPredicted RBP11.77□□□□□ -0.53
RPSA-208ENST00000487876 PAIP2Q9BPZ3 127 aaKnown RBP11.77□□□□□ -0.53
RPSA-208ENST00000487876 LMF2Q9BU23 707 aaKnown RBP11.77□□□□□ -0.53
RPSA-208ENST00000487876 ALKBH4Q9NXW9 302 aa11.77□□□□□ -0.53
RPSA-208ENST00000487876 ATP6V1HQ9UI12 483 aa11.77□□□□□ -0.53
RPSA-208ENST00000487876 RNF6Q9Y252 685 aa11.77□□□□□ -0.53
RPSA-208ENST00000487876 CSMD2Q7Z408 3487 aa11.76□□□□□ -0.53
RPSA-208ENST00000487876 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.76□□□□□ -0.53
RPSA-208ENST00000487876 TMEM120BA0PK00 339 aa11.76□□□□□ -0.53
RPSA-208ENST00000487876 ERLIN1O75477 346 aa11.76□□□□□ -0.53
RPSA-208ENST00000487876 GLI4P10075 376 aa11.76□□□□□ -0.53
RPSA-208ENST00000487876 G6PDP11413 515 aa11.76□□□□□ -0.53
RPSA-208ENST00000487876 PRF1P14222 555 aa11.76□□□□□ -0.53
RPSA-208ENST00000487876 ELAVL4P26378 380 aaKnown RBP11.76□□□□□ -0.53
RPSA-208ENST00000487876 RFX3P48380 749 aa11.76□□□□□ -0.53
RPSA-208ENST00000487876 PNLIPRP2P54317 469 aa11.76□□□□□ -0.53
RPSA-208ENST00000487876 PRKAG1P54619 331 aa11.76□□□□□ -0.53
RPSA-208ENST00000487876 GAS1P54826 345 aa11.76□□□□□ -0.53
RPSA-208ENST00000487876 MANFP55145 182 aaKnown RBP11.76□□□□□ -0.53
RPSA-208ENST00000487876 WNT3P56703 355 aa11.76□□□□□ -0.53
RPSA-208ENST00000487876 CRYZQ08257 329 aaKnown RBP11.76□□□□□ -0.53
RPSA-208ENST00000487876 BST1Q10588 318 aa11.76□□□□□ -0.53
RPSA-208ENST00000487876 SNTA1Q13424 505 aa11.76□□□□□ -0.53
RPSA-208ENST00000487876 EFR3AQ14156 821 aa11.76□□□□□ -0.53
RPSA-208ENST00000487876 OR5M10Q6IEU7 315 aa11.76□□□□□ -0.53
RPSA-208ENST00000487876 GALNT10Q86SR1 603 aa11.76□□□□□ -0.53
RPSA-208ENST00000487876 CROCCP2Q86T23 111 aa11.76□□□□□ -0.53
RPSA-208ENST00000487876 YRDCQ86U90 279 aaKnown RBP11.76□□□□□ -0.53
RPSA-208ENST00000487876 ZFP28Q8NHY6 868 aa11.76□□□□□ -0.53
RPSA-208ENST00000487876 MGARPQ8TDB4 240 aa11.76□□□□□ -0.53
RPSA-208ENST00000487876 PIK3R3Q92569 461 aa11.76□□□□□ -0.53
RPSA-208ENST00000487876 MTERF3Q96E29 417 aa11.76□□□□□ -0.53
RPSA-208ENST00000487876 GIMAP5Q96F15 307 aa11.76□□□□□ -0.53
RPSA-208ENST00000487876 ZBED6CLQ96FA7 236 aaPredicted RBP11.76□□□□□ -0.53
RPSA-208ENST00000487876 DOCK7Q96N67 2140 aa11.76□□□□□ -0.53
RPSA-208ENST00000487876 TTYH2Q9BSA4 534 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms