RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 STOX2Q9P2F5 926 aaPredicted RBP2.16□□□□□ -2.06
SMC4-219ENST00000487747 ITM2BQ9Y287 266 aa2.16□□□□□ -2.06
SMC4-219ENST00000487747 ANKRD30BQ9BXX2 1392 aa2.15□□□□□ -2.07
SMC4-219ENST00000487747 LRRD1A4D1F6 860 aa2.15□□□□□ -2.07
SMC4-219ENST00000487747 ST8SIA6P61647 398 aa2.15□□□□□ -2.07
SMC4-219ENST00000487747 OTUD4Q01804 1114 aaKnown RBP2.15□□□□□ -2.07
SMC4-219ENST00000487747 LY6EQ16553 131 aa2.15□□□□□ -2.07
SMC4-219ENST00000487747 LRRC31Q6UY01 552 aa2.15□□□□□ -2.07
SMC4-219ENST00000487747 GBP6Q6ZN66 633 aa2.15□□□□□ -2.07
SMC4-219ENST00000487747 HOOK3Q86VS8 718 aa2.15□□□□□ -2.07
SMC4-219ENST00000487747 LYPD1Q8N2G4 141 aa2.15□□□□□ -2.07
SMC4-219ENST00000487747 C7orf33Q8WU49 177 aa2.15□□□□□ -2.07
SMC4-219ENST00000487747 PHF10Q8WUB8 498 aaKnown RBP2.15□□□□□ -2.07
SMC4-219ENST00000487747 DEPDC1BQ8WUY9 529 aa2.15□□□□□ -2.07
SMC4-219ENST00000487747 P3H4Q92791 437 aa2.15□□□□□ -2.07
SMC4-219ENST00000487747 TMEM101Q96IK0 257 aa2.15□□□□□ -2.07
SMC4-219ENST00000487747 ZNF350Q9GZX5 532 aa2.15□□□□□ -2.07
SMC4-219ENST00000487747 ABCG8Q9H221 673 aa2.15□□□□□ -2.07
SMC4-219ENST00000487747 ELOVL2Q9NXB9 296 aa2.15□□□□□ -2.07
SMC4-219ENST00000487747 LCMT1Q9UIC8 334 aa2.15□□□□□ -2.07
SMC4-219ENST00000487747 TRMT6Q9UJA5 497 aaKnown RBP2.15□□□□□ -2.07
SMC4-219ENST00000487747 NAP1L2Q9ULW6 460 aaPredicted RBP2.15□□□□□ -2.07
SMC4-219ENST00000487747 THSD7BQ9C0I4 1608 aa2.15□□□□□ -2.07
SMC4-219ENST00000487747 PTPRUQ92729 1446 aa2.15□□□□□ -2.07
SMC4-219ENST00000487747 SCN2AQ99250 2005 aa2.15□□□□□ -2.07
SMC4-219ENST00000487747 A0A0J9YXY3 114 aa2.14□□□□□ -2.07
SMC4-219ENST00000487747 FAM166BA8MTA8 275 aa2.14□□□□□ -2.07
SMC4-219ENST00000487747 PGK2P07205 417 aa2.14□□□□□ -2.07
SMC4-219ENST00000487747 NUDT1P36639 197 aa2.14□□□□□ -2.07
SMC4-219ENST00000487747 STXBP2Q15833 593 aa2.14□□□□□ -2.07
SMC4-219ENST00000487747 CLPPQ16740 277 aaPredicted RBP2.14□□□□□ -2.07
SMC4-219ENST00000487747 EOGTQ5NDL2 527 aa2.14□□□□□ -2.07
SMC4-219ENST00000487747 GPR157Q5UAW9 335 aa2.14□□□□□ -2.07
SMC4-219ENST00000487747 SLC22A16Q86VW1 577 aa2.14□□□□□ -2.07
SMC4-219ENST00000487747 ALLCQ8N6M5 410 aa2.14□□□□□ -2.07
SMC4-219ENST00000487747 SUMF2Q8NBJ7 301 aa2.14□□□□□ -2.07
SMC4-219ENST00000487747 DLX4Q92988 240 aaPredicted RBP2.14□□□□□ -2.07
SMC4-219ENST00000487747 EDEM3Q9BZQ6 932 aa2.14□□□□□ -2.07
SMC4-219ENST00000487747 VPS54Q9P1Q0 977 aa2.14□□□□□ -2.07
SMC4-219ENST00000487747 TRPC4Q9UBN4 977 aa2.14□□□□□ -2.07
SMC4-219ENST00000487747 USP6P35125 1406 aa2.14□□□□□ -2.07
SMC4-219ENST00000487747 TRBV7-9A0A0J9YWB2 115 aa2.13□□□□□ -2.07
SMC4-219ENST00000487747 IGSF6O95976 241 aa2.13□□□□□ -2.07
SMC4-219ENST00000487747 FCARP24071 287 aa2.13□□□□□ -2.07
SMC4-219ENST00000487747 TIMM10P62072 90 aa2.13□□□□□ -2.07
SMC4-219ENST00000487747 UBXN1Q04323 297 aa2.13□□□□□ -2.07
SMC4-219ENST00000487747 DPYSQ14117 519 aa2.13□□□□□ -2.07
SMC4-219ENST00000487747 GPAT3Q53EU6 434 aa2.13□□□□□ -2.07
SMC4-219ENST00000487747 PPP1R27Q86WC6 154 aa2.13□□□□□ -2.07
SMC4-219ENST00000487747 ZNF100Q8IYN0 542 aa2.13□□□□□ -2.07
SMC4-219ENST00000487747 TMEM61Q8N0U2 210 aa2.13□□□□□ -2.07
SMC4-219ENST00000487747 TEKT1Q969V4 418 aa2.13□□□□□ -2.07
SMC4-219ENST00000487747 RAB39BQ96DA2 213 aa2.13□□□□□ -2.07
SMC4-219ENST00000487747 SMIM14Q96QK8 99 aa2.13□□□□□ -2.07
SMC4-219ENST00000487747 CHRDL1Q9BU40 450 aa2.13□□□□□ -2.07
SMC4-219ENST00000487747 UTP14AQ9BVJ6 771 aaKnown RBP2.13□□□□□ -2.07
SMC4-219ENST00000487747 MAGEF1Q9HAY2 307 aa2.13□□□□□ -2.07
SMC4-219ENST00000487747 STARD5Q9NSY2 213 aa2.13□□□□□ -2.07
SMC4-219ENST00000487747 PURGQ9UJV8 347 aaKnown RBP2.13□□□□□ -2.07
SMC4-219ENST00000487747 L3MBTL1Q9Y468 752 aa2.13□□□□□ -2.07
SMC4-219ENST00000487747 IGKV1D-17A0A075B6S4 117 aa2.12□□□□□ -2.07
SMC4-219ENST00000487747 C13orf42A0A1B0GVH6 325 aa2.12□□□□□ -2.07
SMC4-219ENST00000487747 TUBAL3A6NHL2 446 aa2.12□□□□□ -2.07
SMC4-219ENST00000487747 TBL1XO60907 577 aa2.12□□□□□ -2.07
SMC4-219ENST00000487747 ICOSLGO75144 302 aa2.12□□□□□ -2.07
SMC4-219ENST00000487747 MAGP20916 626 aa2.12□□□□□ -2.07
SMC4-219ENST00000487747 BNIP1Q12981 228 aa2.12□□□□□ -2.07
SMC4-219ENST00000487747 EIF2B1Q14232 305 aaKnown RBP2.12□□□□□ -2.07
SMC4-219ENST00000487747 ANKRD20A4Q4UJ75 823 aa2.12□□□□□ -2.07
SMC4-219ENST00000487747 ANKRD20A8PQ5CZ79 823 aa2.12□□□□□ -2.07
SMC4-219ENST00000487747 ANKRD20A2Q5SQ80 823 aa2.12□□□□□ -2.07
SMC4-219ENST00000487747 ANKRD20A1Q5TYW2 823 aa2.12□□□□□ -2.07
SMC4-219ENST00000487747 ANKRD20A3Q5VUR7 823 aa2.12□□□□□ -2.07
SMC4-219ENST00000487747 KRTAP13-1Q8IUC0 172 aa2.12□□□□□ -2.07
SMC4-219ENST00000487747 CHCHD4Q8N4Q1 142 aa2.12□□□□□ -2.07
SMC4-219ENST00000487747 OR4A16Q8NH70 328 aa2.12□□□□□ -2.07
SMC4-219ENST00000487747 MBOAT4Q96T53 435 aa2.12□□□□□ -2.07
SMC4-219ENST00000487747 CITED2Q99967 270 aaPredicted RBP2.12□□□□□ -2.07
SMC4-219ENST00000487747 NLNQ9BYT8 704 aa2.12□□□□□ -2.07
SMC4-219ENST00000487747 RNPEPL1Q9HAU8 725 aa2.12□□□□□ -2.07
SMC4-219ENST00000487747 MMP26Q9NRE1 261 aa2.12□□□□□ -2.07
SMC4-219ENST00000487747 ACOXLQ9NUZ1 547 aa2.12□□□□□ -2.07
SMC4-219ENST00000487747 ERVK-18Q9QC07 812 aa2.12□□□□□ -2.07
SMC4-219ENST00000487747 LHX3Q9UBR4 397 aa2.12□□□□□ -2.07
SMC4-219ENST00000487747 METP08581 1390 aa2.11□□□□□ -2.07
SMC4-219ENST00000487747 PLEKHG1Q9ULL1 1385 aa2.11□□□□□ -2.07
SMC4-219ENST00000487747 DHRS7CA6NNS2 312 aa2.11□□□□□ -2.07
SMC4-219ENST00000487747 E9PLD3 99 aa2.11□□□□□ -2.07
SMC4-219ENST00000487747 NPIPB7O75200 414 aa2.11□□□□□ -2.07
SMC4-219ENST00000487747 SCRG1O75711 98 aa2.11□□□□□ -2.07
SMC4-219ENST00000487747 BBOX1O75936 387 aa2.11□□□□□ -2.07
SMC4-219ENST00000487747 HSPA4LO95757 839 aa2.11□□□□□ -2.07
SMC4-219ENST00000487747 OR8U8P0C7N1 319 aa2.11□□□□□ -2.07
SMC4-219ENST00000487747 RCC1P18754 421 aaPredicted RBP2.11□□□□□ -2.07
SMC4-219ENST00000487747 CCNCP24863 283 aa2.11□□□□□ -2.07
SMC4-219ENST00000487747 HTR1EP28566 365 aa2.11□□□□□ -2.07
SMC4-219ENST00000487747 SERPINH1P50454 418 aaKnown RBP2.11□□□□□ -2.07
SMC4-219ENST00000487747 OC90Q02509 493 aaPredicted RBP2.11□□□□□ -2.07
SMC4-219ENST00000487747 PDE7AQ13946 482 aa2.11□□□□□ -2.07
SMC4-219ENST00000487747 DPYSL3Q14195 570 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms