RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 EXOSC3Q9NQT5 275 aaKnown RBP2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 FAM114A2Q9NRY5 505 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 C1orf123Q9NWV4 160 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 HPF1Q9NWY4 346 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 SOHLH2Q9NX45 425 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 GPR83Q9NYM4 423 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 RDH8Q9NYR8 311 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 NINJ2Q9NZG7 142 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 ACTR3BQ9P1U1 418 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 RCOR3Q9P2K3 495 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 DPM3Q9P2X0 92 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 BARX2Q9UMQ3 279 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 EIF3LQ9Y262 564 aaKnown RBP2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 RNF115Q9Y4L5 304 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 ZMYM6O95789 1325 aa2.92□□□□□ -1.94
HMGB1P36-201ENST00000487709 A0A087WWV3 80 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 FBLL1A6NHQ2 334 aaKnown RBP2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 WASHC1A8K0Z3 465 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 TMEM110-MUSTN1A8MSY1 372 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 WASH3PC4AMC7 463 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 PDXKO00764 312 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 GPAA1O43292 621 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 BCL2L11O43521 198 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 SCGB2A1O75556 95 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 B3GALNT1O75752 331 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 HOXB7P09629 217 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 THRBP10828 461 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 PGAM2P15259 253 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 TSPAN8P19075 237 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 DNAJB1P25685 340 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 PRKAR2BP31323 418 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 KIF5BP33176 963 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 HMGCLP35914 325 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 RABIFP47224 123 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 ZNF85Q03923 595 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 DPYSQ14117 519 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 CAMK4Q16566 473 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 ZSWIM7Q19AV6 140 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 ZNF699Q32M78 642 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 SEL1L2Q5TEA6 688 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 C12orf60Q5U649 245 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 METTL11BQ5VVY1 283 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 SLX4IPQ5VYV7 408 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 LEG1Q6P5S2 330 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 VITQ6UXI7 678 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 WASH2PQ6VEQ5 465 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 TMEM110Q86TL2 294 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 SYVN1Q86TM6 617 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 ZBED8Q8IZ13 594 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 ARFGAP2Q8N6H7 521 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 BCORP1Q8N888 145 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 OR4F17Q8NGA8 305 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 PPP1R16AQ96I34 528 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 VPS39Q96JC1 886 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 OR4F4Q96R69 305 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 ELOVL4Q9GZR5 314 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 LPAR2Q9HBW0 351 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 TRPV5Q9NQA5 729 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 POLE3Q9NRF9 147 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 STARD5Q9NSY2 213 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 FAM120CQ9NX05 1096 aaKnown RBP2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 ANKMY1Q9P2S6 941 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 PRODH2Q9UF12 536 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 NAALAD2Q9Y3Q0 740 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 CLCA3PQ9Y6N3 262 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 PTPRUQ92729 1446 aa2.91□□□□□ -1.94
HMGB1P36-201ENST00000487709 ZNF840PA6NDX5 716 aa2.9□□□□□ -1.95
HMGB1P36-201ENST00000487709 H3BMH7 237 aa2.9□□□□□ -1.95
HMGB1P36-201ENST00000487709 CLDN3O15551 220 aa2.9□□□□□ -1.95
HMGB1P36-201ENST00000487709 SRPX2O60687 465 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P36-201ENST00000487709 ZNF354AO60765 605 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P36-201ENST00000487709 SDC3O75056 442 aa2.9□□□□□ -1.95
HMGB1P36-201ENST00000487709 GJB5O95377 273 aa2.9□□□□□ -1.95
HMGB1P36-201ENST00000487709 UMPSP11172 480 aa2.9□□□□□ -1.95
HMGB1P36-201ENST00000487709 GATA2P23769 480 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P36-201ENST00000487709 IGFBP5P24593 272 aa2.9□□□□□ -1.95
HMGB1P36-201ENST00000487709 PSMA2P25787 234 aa2.9□□□□□ -1.95
HMGB1P36-201ENST00000487709 DPP4P27487 766 aa2.9□□□□□ -1.95
HMGB1P36-201ENST00000487709 RPL4P36578 427 aaKnown RBP2.9□□□□□ -1.95
HMGB1P36-201ENST00000487709 ACVR1BP36896 505 aa2.9□□□□□ -1.95
HMGB1P36-201ENST00000487709 HTR5AP47898 357 aa2.9□□□□□ -1.95
HMGB1P36-201ENST00000487709 CAMLGP49069 296 aa2.9□□□□□ -1.95
HMGB1P36-201ENST00000487709 SLC25A1P53007 311 aa2.9□□□□□ -1.95
HMGB1P36-201ENST00000487709 HAND2P61296 217 aa2.9□□□□□ -1.95
HMGB1P36-201ENST00000487709 PUDPQ08623 228 aa2.9□□□□□ -1.95
HMGB1P36-201ENST00000487709 CD47Q08722 323 aa2.9□□□□□ -1.95
HMGB1P36-201ENST00000487709 LTB4RQ15722 352 aa2.9□□□□□ -1.95
HMGB1P36-201ENST00000487709 DCST2Q5T1A1 773 aa2.9□□□□□ -1.95
HMGB1P36-201ENST00000487709 ADAMTSL5Q6ZMM2 481 aa2.9□□□□□ -1.95
HMGB1P36-201ENST00000487709 LPCAT2Q7L5N7 544 aa2.9□□□□□ -1.95
HMGB1P36-201ENST00000487709 ADGRD2Q7Z7M1 963 aa2.9□□□□□ -1.95
HMGB1P36-201ENST00000487709 PARGQ86W56 976 aa2.9□□□□□ -1.95
HMGB1P36-201ENST00000487709 CCDC36Q8IYA8 594 aa2.9□□□□□ -1.95
HMGB1P36-201ENST00000487709 TAF4BQ92750 862 aa2.9□□□□□ -1.95
HMGB1P36-201ENST00000487709 NTNG2Q96CW9 530 aa2.9□□□□□ -1.95
HMGB1P36-201ENST00000487709 VPS35Q96QK1 796 aa2.9□□□□□ -1.95
HMGB1P36-201ENST00000487709 TBCDQ9BTW9 1192 aa2.9□□□□□ -1.95
HMGB1P36-201ENST00000487709 GSDMCQ9BYG8 508 aa2.9□□□□□ -1.95
HMGB1P36-201ENST00000487709 DPH5Q9H2P9 285 aa2.9□□□□□ -1.95
HMGB1P36-201ENST00000487709 ACTR8Q9H981 624 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms