RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 VN1R4Q7Z5H5 301 aa24.47■■□□□ 1.51
HLA-C-208ENST00000487245 JPH3Q8WXH2 748 aaPredicted RBP24.47■■□□□ 1.51
HLA-C-208ENST00000487245 SLC25A46Q96AG3 418 aa24.47■■□□□ 1.51
HLA-C-208ENST00000487245 C16orf58Q96GQ5 468 aa24.47■■□□□ 1.51
HLA-C-208ENST00000487245 MSLNLQ96KJ4 702 aa24.47■■□□□ 1.51
HLA-C-208ENST00000487245 CTRCQ99895 268 aa24.47■■□□□ 1.51
HLA-C-208ENST00000487245 ZNF624Q9P2J8 865 aaPredicted RBP24.47■■□□□ 1.51
HLA-C-208ENST00000487245 ALPPP05187 535 aa24.46■■□□□ 1.51
HLA-C-208ENST00000487245 ALPPL2P10696 532 aa24.46■■□□□ 1.51
HLA-C-208ENST00000487245 WNT4P56705 351 aa24.46■■□□□ 1.51
HLA-C-208ENST00000487245 MRPS21P82921 87 aaKnown RBP24.46■■□□□ 1.51
HLA-C-208ENST00000487245 AGAP6Q5VW22 663 aa24.46■■□□□ 1.51
HLA-C-208ENST00000487245 AGAP4Q96P64 663 aa24.46■■□□□ 1.51
HLA-C-208ENST00000487245 ACTRT3Q9BYD9 372 aa24.46■■□□□ 1.51
HLA-C-208ENST00000487245 HOXD1Q9GZZ0 328 aa24.46■■□□□ 1.51
HLA-C-208ENST00000487245 MIR1-1HGQ9H1L0 117 aa24.46■■□□□ 1.51
HLA-C-208ENST00000487245 MOV10Q9HCE1 1003 aaKnown RBP24.46■■□□□ 1.51
HLA-C-208ENST00000487245 PRDM9Q9NQV7 894 aa24.46■■□□□ 1.51
HLA-C-208ENST00000487245 SNTG1Q9NSN8 517 aa24.46■■□□□ 1.51
HLA-C-208ENST00000487245 TXNL4BQ9NX01 149 aaKnown RBP24.46■■□□□ 1.51
HLA-C-208ENST00000487245 ERVK13-1Q9NX77 482 aa24.46■■□□□ 1.51
HLA-C-208ENST00000487245 CMAHPQ9Y471 501 aa24.46■■□□□ 1.51
HLA-C-208ENST00000487245 URADA6NGE7 173 aa24.45■■□□□ 1.51
HLA-C-208ENST00000487245 DUXAA6NLW8 204 aa24.45■■□□□ 1.51
HLA-C-208ENST00000487245 BTN3A3O00478 584 aa24.45■■□□□ 1.51
HLA-C-208ENST00000487245 TNFSF14O43557 240 aa24.45■■□□□ 1.51
HLA-C-208ENST00000487245 EML2O95834 649 aa24.45■■□□□ 1.51
HLA-C-208ENST00000487245 AGR2O95994 175 aa24.45■■□□□ 1.51
HLA-C-208ENST00000487245 SLC35G6P0C7Q6 338 aa24.45■■□□□ 1.51
HLA-C-208ENST00000487245 AK4P27144 223 aaPredicted RBP24.45■■□□□ 1.51
HLA-C-208ENST00000487245 TSPAN31Q12999 210 aa24.45■■□□□ 1.51
HLA-C-208ENST00000487245 TPBGQ13641 420 aa24.45■■□□□ 1.51
HLA-C-208ENST00000487245 TRAM2Q15035 370 aa24.45■■□□□ 1.51
HLA-C-208ENST00000487245 SNAPC1Q16533 368 aa24.45■■□□□ 1.51
HLA-C-208ENST00000487245 MINDY4Q4G0A6 757 aa24.45■■□□□ 1.51
HLA-C-208ENST00000487245 ZNF311Q5JNZ3 666 aa24.45■■□□□ 1.51
HLA-C-208ENST00000487245 LIPKQ5VXJ0 399 aa24.45■■□□□ 1.51
HLA-C-208ENST00000487245 RASSF6Q6ZTQ3 369 aa24.45■■□□□ 1.51
HLA-C-208ENST00000487245 TEX47Q8TBZ9 253 aa24.45■■□□□ 1.51
HLA-C-208ENST00000487245 GPR151Q8TDV0 419 aa24.45■■□□□ 1.51
HLA-C-208ENST00000487245 TWSG1Q9GZX9 223 aa24.45■■□□□ 1.51
HLA-C-208ENST00000487245 NTMQ9P121 344 aa24.45■■□□□ 1.51
HLA-C-208ENST00000487245 CLEC1BQ9P126 229 aa24.45■■□□□ 1.51
HLA-C-208ENST00000487245 EXOSC1Q9Y3B2 195 aaKnown RBP24.45■■□□□ 1.51
HLA-C-208ENST00000487245 A0A087WUU8 490 aa24.45■■□□□ 1.5
HLA-C-208ENST00000487245 KDM4EB2RXH2 506 aaPredicted RBP24.45■■□□□ 1.5
HLA-C-208ENST00000487245 MYL12AP19105 171 aa24.45■■□□□ 1.5
HLA-C-208ENST00000487245 HNRNPA2B1P22626 353 aaKnown RBP24.45■■□□□ 1.5
HLA-C-208ENST00000487245 IFNA8P32881 189 aa24.45■■□□□ 1.5
HLA-C-208ENST00000487245 MC3RP41968 323 aa24.45■■□□□ 1.5
HLA-C-208ENST00000487245 SUZ12Q15022 739 aaKnown RBP24.45■■□□□ 1.5
HLA-C-208ENST00000487245 PLK5Q496M5 336 aa24.45■■□□□ 1.5
HLA-C-208ENST00000487245 SLC27A4Q6P1M0 643 aa24.45■■□□□ 1.5
HLA-C-208ENST00000487245 OLIG3Q7RTU3 272 aa24.45■■□□□ 1.5
HLA-C-208ENST00000487245 OR9A2Q8NGT5 310 aa24.45■■□□□ 1.5
HLA-C-208ENST00000487245 TM4SF19Q96DZ7 209 aa24.45■■□□□ 1.5
HLA-C-208ENST00000487245 OTUB1Q96FW1 271 aaPredicted RBP24.45■■□□□ 1.5
HLA-C-208ENST00000487245 SERINC2Q96SA4 455 aa24.45■■□□□ 1.5
HLA-C-208ENST00000487245 NELL2Q99435 816 aa24.45■■□□□ 1.5
HLA-C-208ENST00000487245 PRRG3Q9BZD7 231 aa24.45■■□□□ 1.5
HLA-C-208ENST00000487245 SYNPO2LQ9H987 977 aa24.45■■□□□ 1.5
HLA-C-208ENST00000487245 GSAPA4D1B5 854 aa24.44■■□□□ 1.5
HLA-C-208ENST00000487245 WWP2O00308 870 aa24.44■■□□□ 1.5
HLA-C-208ENST00000487245 CYP7B1O75881 506 aa24.44■■□□□ 1.5
HLA-C-208ENST00000487245 UBXN7O94888 489 aa24.44■■□□□ 1.5
HLA-C-208ENST00000487245 ZNF888P0CJ79 500 aaPredicted RBP24.44■■□□□ 1.5
HLA-C-208ENST00000487245 MAGP20916 626 aa24.44■■□□□ 1.5
HLA-C-208ENST00000487245 DRD1P21728 446 aa24.44■■□□□ 1.5
HLA-C-208ENST00000487245 ACTR1BP42025 376 aa24.44■■□□□ 1.5
HLA-C-208ENST00000487245 ACTR1AP61163 376 aa24.44■■□□□ 1.5
HLA-C-208ENST00000487245 RD3Q7Z3Z2 195 aa24.44■■□□□ 1.5
HLA-C-208ENST00000487245 CACTIN-AS1Q8N1I8 211 aa24.44■■□□□ 1.5
HLA-C-208ENST00000487245 DIO2Q92813 273 aa24.44■■□□□ 1.5
HLA-C-208ENST00000487245 BMFQ96LC9 184 aa24.44■■□□□ 1.5
HLA-C-208ENST00000487245 SRRQ9GZT4 340 aa24.44■■□□□ 1.5
HLA-C-208ENST00000487245 SLC38A1Q9H2H9 487 aa24.44■■□□□ 1.5
HLA-C-208ENST00000487245 C14orf119Q9NWQ9 140 aa24.44■■□□□ 1.5
HLA-C-208ENST00000487245 MDC1Q14676 2089 aaKnown RBP24.44■■□□□ 1.5
HLA-C-208ENST00000487245 ATG2BQ96BY7 2078 aa24.43■■□□□ 1.5
HLA-C-208ENST00000487245 TNFRSF17Q02223 184 aa24.43■■□□□ 1.5
HLA-C-208ENST00000487245 HTR4Q13639 388 aa24.43■■□□□ 1.5
HLA-C-208ENST00000487245 ZNF79Q15937 498 aa24.43■■□□□ 1.5
HLA-C-208ENST00000487245 FLYWCH1Q4VC44 716 aa24.43■■□□□ 1.5
HLA-C-208ENST00000487245 FBXO42Q6P3S6 717 aa24.43■■□□□ 1.5
HLA-C-208ENST00000487245 HSDL2Q6YN16 418 aa24.43■■□□□ 1.5
HLA-C-208ENST00000487245 C16orf62Q7Z3J2 963 aa24.43■■□□□ 1.5
HLA-C-208ENST00000487245 LAPTM4BQ86VI4 370 aa24.43■■□□□ 1.5
HLA-C-208ENST00000487245 OR8H2Q8N162 312 aa24.43■■□□□ 1.5
HLA-C-208ENST00000487245 KCT2Q8NC54 265 aa24.43■■□□□ 1.5
HLA-C-208ENST00000487245 ZFPM2Q8WW38 1151 aa24.43■■□□□ 1.5
HLA-C-208ENST00000487245 C10orf90Q96M02 699 aa24.43■■□□□ 1.5
HLA-C-208ENST00000487245 SLC38A2Q96QD8 506 aa24.43■■□□□ 1.5
HLA-C-208ENST00000487245 PLA2G12AQ9BZM1 189 aa24.43■■□□□ 1.5
HLA-C-208ENST00000487245 SAP130Q9H0E3 1048 aa24.43■■□□□ 1.5
HLA-C-208ENST00000487245 KLHL28Q9NXS3 571 aa24.43■■□□□ 1.5
HLA-C-208ENST00000487245 SF3B6Q9Y3B4 125 aaKnown RBP24.43■■□□□ 1.5
HLA-C-208ENST00000487245 KCNE3Q9Y6H6 103 aa24.43■■□□□ 1.5
HLA-C-208ENST00000487245 SMIM10L1P0DMW3 83 aa24.43■■□□□ 1.5
HLA-C-208ENST00000487245 CPN2P22792 545 aa24.43■■□□□ 1.5
HLA-C-208ENST00000487245 PTGER1P34995 402 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms