RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 TSC22D4Q9Y3Q8 395 aa6.85□□□□□ -1.31
PDPN-205ENST00000487038 ANGPTL3Q9Y5C1 460 aa6.85□□□□□ -1.31
PDPN-205ENST00000487038 AP4B1Q9Y6B7 739 aa6.85□□□□□ -1.31
PDPN-205ENST00000487038 CADP27708 2225 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 FREM1Q5H8C1 2179 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 A0A096LNT2 108 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 C1orf226A1L170 272 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 K7EPI3 171 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 TMPRSS11DO60235 418 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 ZIC3O60481 467 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 GUCY1B2O75343 617 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 EEDO75530 441 aaKnown RBP6.84□□□□□ -1.31
PDPN-205ENST00000487038 BANF1O75531 89 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 BCAS2O75934 225 aaPredicted RBP6.84□□□□□ -1.31
PDPN-205ENST00000487038 SYNGR4O95473 234 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 ATP1B1P05026 303 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 TUBBP07437 444 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 IGHV4-31P0DP07 118 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 EPORP19235 508 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 CFPP27918 469 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 BSGP35613 385 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 EIF1AXP47813 144 aaKnown RBP6.84□□□□□ -1.31
PDPN-205ENST00000487038 SUCLG1P53597 346 aaKnown RBP6.84□□□□□ -1.31
PDPN-205ENST00000487038 CDH11P55287 796 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 B3GALT5-AS1P59052 145 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 TAS2R39P59534 338 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 BSPH1Q075Z2 132 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 ZNF844Q08AG5 666 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 MAP4K2Q12851 820 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 PPP1R7Q15435 360 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 FAM120AOSQ5T036 256 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 RNASEH2BQ5TBB1 312 aaKnown RBP6.84□□□□□ -1.31
PDPN-205ENST00000487038 LIPJQ5W064 366 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 GTF2IRD2BQ6EKJ0 949 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 TTC27Q6P3X3 843 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 IL17RELQ6ZVW7 336 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 SSX8Q7RTT4 187 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 GTF2IRD2Q86UP8 949 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 DTX2Q86UW9 622 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 EXOC3L1Q86VI1 746 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 ZC3HC1Q86WB0 502 aaKnown RBP6.84□□□□□ -1.31
PDPN-205ENST00000487038 OR10H5Q8NGA6 315 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 OR52R1Q8NGF1 315 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 SGMS2Q8NHU3 365 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 HSD17B8Q92506 261 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 FAM168AQ92567 244 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 PROX1Q92786 737 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 ADOQ96SZ5 270 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 ZNF717Q9BY31 904 aaPredicted RBP6.84□□□□□ -1.31
PDPN-205ENST00000487038 POTEKPQ9BYX7 375 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 ADAM19Q9H013 955 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 SMYD2Q9NRG4 433 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 CISD1Q9NZ45 108 aaKnown RBP6.84□□□□□ -1.31
PDPN-205ENST00000487038 NUDT4Q9NZJ9 180 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 MAT2BQ9NZL9 334 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 XPR1Q9UBH6 696 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 CHMP2BQ9UQN3 213 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 B3GALT5Q9Y2C3 310 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 ZNF337Q9Y3M9 751 aa6.84□□□□□ -1.31
PDPN-205ENST00000487038 MALRD1Q5VYJ5 2156 aa6.84□□□□□ -1.32
PDPN-205ENST00000487038 A0A1W2PS29 197 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 OR2M5A3KFT3 312 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 WASHC1A8K0Z3 465 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 H0YC42 278 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 EIF1AYO14602 144 aaKnown RBP6.83□□□□□ -1.32
PDPN-205ENST00000487038 DNALI1O14645 258 aaPredicted RBP6.83□□□□□ -1.32
PDPN-205ENST00000487038 PGRMC2O15173 223 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 SCO2O43819 266 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 KIAA0513O60268 411 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 UGDHO60701 494 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 ERAL1O75616 437 aaKnown RBP6.83□□□□□ -1.32
PDPN-205ENST00000487038 AQP8O94778 261 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 SEMA3DO95025 777 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 CCDC166P0CW27 439 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 BMP4P12644 408 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 CD1DP15813 335 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 STMN1P16949 149 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 USF1P22415 310 aaPredicted RBP6.83□□□□□ -1.32
PDPN-205ENST00000487038 ADH6P28332 368 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 EVI2BP34910 448 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 CLK3P49761 638 aaKnown RBP6.83□□□□□ -1.32
PDPN-205ENST00000487038 PNLIPRP2P54317 469 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 TPD52P55327 224 aaPredicted RBP6.83□□□□□ -1.32
PDPN-205ENST00000487038 CLDN20P56880 219 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 LSM11P83369 360 aaKnown RBP eCLIP6.83□□□□□ -1.32
PDPN-205ENST00000487038 POU4F1Q01851 419 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 MGAT5Q09328 741 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 EXOSC7Q15024 291 aaKnown RBP6.83□□□□□ -1.32
PDPN-205ENST00000487038 RAB35Q15286 201 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 TAB1Q15750 504 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 CTU2Q2VPK5 515 aaKnown RBP6.83□□□□□ -1.32
PDPN-205ENST00000487038 GLYR1Q49A26 553 aaPredicted RBP6.83□□□□□ -1.32
PDPN-205ENST00000487038 TMEM201Q5SNT2 666 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 FIGNL1Q6PIW4 674 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 LARP4Q71RC2 724 aaKnown RBP eCLIP6.83□□□□□ -1.32
PDPN-205ENST00000487038 PAGE2Q7Z2X7 111 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 PDIK1LQ8N165 341 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 RNF175Q8N4F7 328 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 ARIH2OSQ8N7S6 290 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 FADS6Q8N9I5 356 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms