RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 SEPHS1P49903 392 aa10.83□□□□□ -0.68
PRKCB-207ENST00000486868 EMDP50402 254 aa10.83□□□□□ -0.68
PRKCB-207ENST00000486868 NUBP1P53384 320 aa10.83□□□□□ -0.68
PRKCB-207ENST00000486868 TPD52P55327 224 aaPredicted RBP10.83□□□□□ -0.68
PRKCB-207ENST00000486868 PSPHP78330 225 aa10.83□□□□□ -0.68
PRKCB-207ENST00000486868 TRIM61Q5EBN2 209 aa10.83□□□□□ -0.68
PRKCB-207ENST00000486868 C6orf141Q5SZD1 244 aa10.83□□□□□ -0.68
PRKCB-207ENST00000486868 GUSBP11Q6P575 273 aa10.83□□□□□ -0.68
PRKCB-207ENST00000486868 ZNF574Q6ZN55 896 aaPredicted RBP10.83□□□□□ -0.68
PRKCB-207ENST00000486868 TTLL10Q6ZVT0 673 aa10.83□□□□□ -0.68
PRKCB-207ENST00000486868 TAGAPQ8N103 731 aa10.83□□□□□ -0.68
PRKCB-207ENST00000486868 ZNF786Q8N393 782 aa10.83□□□□□ -0.68
PRKCB-207ENST00000486868 SLC5A8Q8N695 610 aa10.83□□□□□ -0.68
PRKCB-207ENST00000486868 OR52R1Q8NGF1 315 aa10.83□□□□□ -0.68
PRKCB-207ENST00000486868 OR4D11Q8NGI4 311 aa10.83□□□□□ -0.68
PRKCB-207ENST00000486868 VSTM2LQ96N03 204 aa10.83□□□□□ -0.68
PRKCB-207ENST00000486868 NUDT22Q9BRQ3 303 aa10.83□□□□□ -0.68
PRKCB-207ENST00000486868 FNDC11Q9BVV2 318 aa10.83□□□□□ -0.68
PRKCB-207ENST00000486868 FOLH1BQ9HBA9 442 aa10.83□□□□□ -0.68
PRKCB-207ENST00000486868 ZNF304Q9HCX3 659 aa10.83□□□□□ -0.68
PRKCB-207ENST00000486868 TMEM9Q9P0T7 183 aa10.83□□□□□ -0.68
PRKCB-207ENST00000486868 KLHL3Q9UH77 587 aa10.83□□□□□ -0.68
PRKCB-207ENST00000486868 ZNF443Q9Y2A4 671 aaPredicted RBP10.83□□□□□ -0.68
PRKCB-207ENST00000486868 TMEM184BQ9Y519 407 aaPredicted RBP10.83□□□□□ -0.68
PRKCB-207ENST00000486868 PCDHGA10Q9Y5H3 936 aa10.83□□□□□ -0.68
PRKCB-207ENST00000486868 GMPPBQ9Y5P6 360 aa10.83□□□□□ -0.68
PRKCB-207ENST00000486868 TNRC6BQ9UPQ9 1833 aaKnown RBP10.83□□□□□ -0.68
PRKCB-207ENST00000486868 A0A1W2PQM1 296 aa10.82□□□□□ -0.68
PRKCB-207ENST00000486868 SH3PXD2BA1X283 911 aa10.82□□□□□ -0.68
PRKCB-207ENST00000486868 CPED1A4D0V7 1026 aa10.82□□□□□ -0.68
PRKCB-207ENST00000486868 NTN3O00634 580 aaPredicted RBP10.82□□□□□ -0.68
PRKCB-207ENST00000486868 PCDH17O14917 1159 aa10.82□□□□□ -0.68
PRKCB-207ENST00000486868 FCMRO60667 390 aa10.82□□□□□ -0.68
PRKCB-207ENST00000486868 MITFO75030 526 aaPredicted RBP10.82□□□□□ -0.68
PRKCB-207ENST00000486868 SEMA7AO75326 666 aa10.82□□□□□ -0.68
PRKCB-207ENST00000486868 UGT2B17O75795 530 aa10.82□□□□□ -0.68
PRKCB-207ENST00000486868 OR5F1O95221 314 aa10.82□□□□□ -0.68
PRKCB-207ENST00000486868 ZIC2O95409 532 aaPredicted RBP10.82□□□□□ -0.68
PRKCB-207ENST00000486868 GP1BAP07359 652 aa10.82□□□□□ -0.68
PRKCB-207ENST00000486868 NID1P14543 1247 aa10.82□□□□□ -0.68
PRKCB-207ENST00000486868 FBLP22087 321 aaKnown RBP10.82□□□□□ -0.68
PRKCB-207ENST00000486868 ELAVL4P26378 380 aaKnown RBP10.82□□□□□ -0.68
PRKCB-207ENST00000486868 TTKP33981 857 aa10.82□□□□□ -0.68
PRKCB-207ENST00000486868 PTGER1P34995 402 aa10.82□□□□□ -0.68
PRKCB-207ENST00000486868 IFNGR2P38484 337 aa10.82□□□□□ -0.68
PRKCB-207ENST00000486868 ALDH3B2P48448 385 aa10.82□□□□□ -0.68
PRKCB-207ENST00000486868 CLK3P49761 638 aaKnown RBP10.82□□□□□ -0.68
PRKCB-207ENST00000486868 DCAF7P61962 342 aa10.82□□□□□ -0.68
PRKCB-207ENST00000486868 EEF1A1P68104 462 aaKnown RBP10.82□□□□□ -0.68
PRKCB-207ENST00000486868 CCL7P80098 99 aa10.82□□□□□ -0.68
PRKCB-207ENST00000486868 MAT1AQ00266 395 aaKnown RBP10.82□□□□□ -0.68
PRKCB-207ENST00000486868 PSG6Q00889 435 aa10.82□□□□□ -0.68
PRKCB-207ENST00000486868 ALDH6A1Q02252 535 aaKnown RBP10.82□□□□□ -0.68
PRKCB-207ENST00000486868 ST3GAL3Q11203 375 aa10.82□□□□□ -0.68
PRKCB-207ENST00000486868 ZNF155Q12901 538 aaPredicted RBP10.82□□□□□ -0.68
PRKCB-207ENST00000486868 KCNAB1Q14722 419 aa10.82□□□□□ -0.68
PRKCB-207ENST00000486868 PERM1Q5SV97 790 aa10.82□□□□□ -0.68
PRKCB-207ENST00000486868 GRAMD2AQ8IUY3 354 aa10.82□□□□□ -0.68
PRKCB-207ENST00000486868 CMIPQ8IY22 773 aa10.82□□□□□ -0.68
PRKCB-207ENST00000486868 DEPDC4Q8N2C3 294 aa10.82□□□□□ -0.68
PRKCB-207ENST00000486868 ZNF615Q8N8J6 731 aa10.82□□□□□ -0.68
PRKCB-207ENST00000486868 OR6T1Q8NGN1 323 aa10.82□□□□□ -0.68
PRKCB-207ENST00000486868 GPR151Q8TDV0 419 aa10.82□□□□□ -0.68
PRKCB-207ENST00000486868 CNDP2Q96KP4 475 aaKnown RBP10.82□□□□□ -0.68
PRKCB-207ENST00000486868 ART5Q96L15 291 aa10.82□□□□□ -0.68
PRKCB-207ENST00000486868 G6PC3Q9BUM1 346 aa10.82□□□□□ -0.68
PRKCB-207ENST00000486868 ANKRA2Q9H9E1 313 aa10.82□□□□□ -0.68
PRKCB-207ENST00000486868 CHST2Q9Y4C5 530 aa10.82□□□□□ -0.68
PRKCB-207ENST00000486868 PRUNE2Q8WUY3 3088 aa10.82□□□□□ -0.68
PRKCB-207ENST00000486868 EYSQ5T1H1 3165 aa10.81□□□□□ -0.68
PRKCB-207ENST00000486868 IGHV5-10-1A0A0J9YXX1 117 aa10.81□□□□□ -0.68
PRKCB-207ENST00000486868 TCRBV16S1A1N1A0A5B0 115 aa10.81□□□□□ -0.68
PRKCB-207ENST00000486868 AP3D1O14617 1153 aa10.81□□□□□ -0.68
PRKCB-207ENST00000486868 MPZL2O60487 215 aa10.81□□□□□ -0.68
PRKCB-207ENST00000486868 KCNK2O95069 426 aa10.81□□□□□ -0.68
PRKCB-207ENST00000486868 CLIC3O95833 236 aa10.81□□□□□ -0.68
PRKCB-207ENST00000486868 RPLP0P05388 317 aaKnown RBP10.81□□□□□ -0.68
PRKCB-207ENST00000486868 IL7RP16871 459 aa10.81□□□□□ -0.68
PRKCB-207ENST00000486868 CRHBPP24387 322 aa10.81□□□□□ -0.68
PRKCB-207ENST00000486868 GABRA3P34903 492 aa10.81□□□□□ -0.68
PRKCB-207ENST00000486868 GGT2P36268 569 aa10.81□□□□□ -0.68
PRKCB-207ENST00000486868 YAP1P46937 504 aaKnown RBP10.81□□□□□ -0.68
PRKCB-207ENST00000486868 RPP38P78345 283 aaKnown RBP10.81□□□□□ -0.68
PRKCB-207ENST00000486868 BTG2P78543 158 aa10.81□□□□□ -0.68
PRKCB-207ENST00000486868 RHAGQ02094 409 aa10.81□□□□□ -0.68
PRKCB-207ENST00000486868 CD47Q08722 323 aa10.81□□□□□ -0.68
PRKCB-207ENST00000486868 CDK5R2Q13319 367 aa10.81□□□□□ -0.68
PRKCB-207ENST00000486868 ILKQ13418 452 aa10.81□□□□□ -0.68
PRKCB-207ENST00000486868 LAPTM4AQ15012 233 aa10.81□□□□□ -0.68
PRKCB-207ENST00000486868 EXOSC7Q15024 291 aaKnown RBP10.81□□□□□ -0.68
PRKCB-207ENST00000486868 TRAM2Q15035 370 aa10.81□□□□□ -0.68
PRKCB-207ENST00000486868 ELAVL1Q15717 326 aaKnown RBP10.81□□□□□ -0.68
PRKCB-207ENST00000486868 NPTX1Q15818 432 aa10.81□□□□□ -0.68
PRKCB-207ENST00000486868 ZNF141Q15928 474 aa10.81□□□□□ -0.68
PRKCB-207ENST00000486868 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.81□□□□□ -0.68
PRKCB-207ENST00000486868 CYP27C1Q4G0S4 372 aa10.81□□□□□ -0.68
PRKCB-207ENST00000486868 ANKRD34AQ69YU3 496 aa10.81□□□□□ -0.68
PRKCB-207ENST00000486868 DEF8Q6ZN54 512 aa10.81□□□□□ -0.68
PRKCB-207ENST00000486868 DGAT2L6Q6ZPD8 337 aa10.81□□□□□ -0.68
PRKCB-207ENST00000486868 VRK2Q86Y07 508 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms