RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 C16orf89Q6UX73 402 aa11.81□□□□□ -0.52
HDAC6-229ENST00000486665 CALHM3Q86XJ0 350 aa11.81□□□□□ -0.52
HDAC6-229ENST00000486665 SLC44A2Q8IWA5 706 aaPredicted RBP11.81□□□□□ -0.52
HDAC6-229ENST00000486665 TMEM102Q8N9M5 508 aaPredicted RBP11.81□□□□□ -0.52
HDAC6-229ENST00000486665 OR5L2Q8NGL0 311 aa11.81□□□□□ -0.52
HDAC6-229ENST00000486665 OR10A6Q8NH74 314 aa11.81□□□□□ -0.52
HDAC6-229ENST00000486665 NUBPLQ8TB37 319 aa11.81□□□□□ -0.52
HDAC6-229ENST00000486665 BRIX1Q8TDN6 353 aaKnown RBP11.81□□□□□ -0.52
HDAC6-229ENST00000486665 ADAMTS15Q8TE58 950 aa11.81□□□□□ -0.52
HDAC6-229ENST00000486665 XAGE5Q8WWM1 108 aa11.81□□□□□ -0.52
HDAC6-229ENST00000486665 PIK3R3Q92569 461 aa11.81□□□□□ -0.52
HDAC6-229ENST00000486665 JADE3Q92613 823 aa11.81□□□□□ -0.52
HDAC6-229ENST00000486665 CDS1Q92903 461 aa11.81□□□□□ -0.52
HDAC6-229ENST00000486665 LCORQ96JN0 433 aaPredicted RBP11.81□□□□□ -0.52
HDAC6-229ENST00000486665 ZNF583Q96ND8 569 aa11.81□□□□□ -0.52
HDAC6-229ENST00000486665 BTBD9Q96Q07 612 aa11.81□□□□□ -0.52
HDAC6-229ENST00000486665 LMF1Q96S06 567 aa11.81□□□□□ -0.52
HDAC6-229ENST00000486665 CDRT15Q96T59 188 aa11.81□□□□□ -0.52
HDAC6-229ENST00000486665 BTBD10Q9BSF8 475 aa11.81□□□□□ -0.52
HDAC6-229ENST00000486665 ING2Q9H160 280 aa11.81□□□□□ -0.52
HDAC6-229ENST00000486665 C1orf21Q9H246 121 aa11.81□□□□□ -0.52
HDAC6-229ENST00000486665 PIGUQ9H490 435 aa11.81□□□□□ -0.52
HDAC6-229ENST00000486665 CDCP1Q9H5V8 836 aa11.81□□□□□ -0.52
HDAC6-229ENST00000486665 GYG2O15488 501 aa11.8□□□□□ -0.52
HDAC6-229ENST00000486665 NADKO95544 446 aaPredicted RBP11.8□□□□□ -0.52
HDAC6-229ENST00000486665 SFTPCP11686 197 aa11.8□□□□□ -0.52
HDAC6-229ENST00000486665 BMP2P12643 396 aa11.8□□□□□ -0.52
HDAC6-229ENST00000486665 ITGA3P26006 1051 aa11.8□□□□□ -0.52
HDAC6-229ENST00000486665 KHKP50053 298 aa11.8□□□□□ -0.52
HDAC6-229ENST00000486665 CCL11P51671 97 aa11.8□□□□□ -0.52
HDAC6-229ENST00000486665 RRADP55042 308 aa11.8□□□□□ -0.52
HDAC6-229ENST00000486665 SOX8P57073 446 aa11.8□□□□□ -0.52
HDAC6-229ENST00000486665 DSTNP60981 165 aa11.8□□□□□ -0.52
HDAC6-229ENST00000486665 DCAF7P61962 342 aa11.8□□□□□ -0.52
HDAC6-229ENST00000486665 LIPEQ05469 1076 aa11.8□□□□□ -0.52
HDAC6-229ENST00000486665 MAPK11Q15759 364 aa11.8□□□□□ -0.52
HDAC6-229ENST00000486665 ZSCAN26Q16670 478 aa11.8□□□□□ -0.52
HDAC6-229ENST00000486665 PIGGQ5H8A4 983 aa11.8□□□□□ -0.52
HDAC6-229ENST00000486665 HLA-DQA1Q5Y7H0 255 aa11.8□□□□□ -0.52
HDAC6-229ENST00000486665 JMJD6Q6NYC1 403 aaPredicted RBP11.8□□□□□ -0.52
HDAC6-229ENST00000486665 OLIG3Q7RTU3 272 aa11.8□□□□□ -0.52
HDAC6-229ENST00000486665 RPS19BP1Q86WX3 136 aaKnown RBP11.8□□□□□ -0.52
HDAC6-229ENST00000486665 PTOV1Q86YD1 416 aa11.8□□□□□ -0.52
HDAC6-229ENST00000486665 LGI4Q8N135 537 aa11.8□□□□□ -0.52
HDAC6-229ENST00000486665 GALNT16Q8N428 558 aa11.8□□□□□ -0.52
HDAC6-229ENST00000486665 SIRT6Q8N6T7 355 aa11.8□□□□□ -0.52
HDAC6-229ENST00000486665 GPR151Q8TDV0 419 aa11.8□□□□□ -0.52
HDAC6-229ENST00000486665 TP53INP1Q96A56 240 aa11.8□□□□□ -0.52
HDAC6-229ENST00000486665 STACQ99469 402 aa11.8□□□□□ -0.52
HDAC6-229ENST00000486665 SH3GL1Q99961 368 aa11.8□□□□□ -0.52
HDAC6-229ENST00000486665 ECSITQ9BQ95 431 aa11.8□□□□□ -0.52
HDAC6-229ENST00000486665 LHPPQ9H008 270 aa11.8□□□□□ -0.52
HDAC6-229ENST00000486665 RAD21L1Q9H4I0 556 aa11.8□□□□□ -0.52
HDAC6-229ENST00000486665 ZNF71Q9NQZ8 489 aaPredicted RBP11.8□□□□□ -0.52
HDAC6-229ENST00000486665 GIN1Q9NXP7 522 aa11.8□□□□□ -0.52
HDAC6-229ENST00000486665 ADA2Q9NZK5 511 aa11.8□□□□□ -0.52
HDAC6-229ENST00000486665 MYOTQ9UBF9 498 aa11.8□□□□□ -0.52
HDAC6-229ENST00000486665 ABCD2Q9UBJ2 740 aa11.8□□□□□ -0.52
HDAC6-229ENST00000486665 L3MBTL1Q9Y468 752 aa11.8□□□□□ -0.52
HDAC6-229ENST00000486665 KCNMB2Q9Y691 235 aa11.8□□□□□ -0.52
HDAC6-229ENST00000486665 C15orf38-AP3S2A0A0A6YYH1 394 aa11.79□□□□□ -0.52
HDAC6-229ENST00000486665 FRG2CA6NGY1 282 aa11.79□□□□□ -0.52
HDAC6-229ENST00000486665 A8MVJ9 347 aa11.79□□□□□ -0.52
HDAC6-229ENST00000486665 TO15178 435 aa11.79□□□□□ -0.52
HDAC6-229ENST00000486665 GSC2O15499 205 aa11.79□□□□□ -0.52
HDAC6-229ENST00000486665 HNRNPCL1O60812 293 aaKnown RBP11.79□□□□□ -0.52
HDAC6-229ENST00000486665 OR2J2O76002 312 aa11.79□□□□□ -0.52
HDAC6-229ENST00000486665 IGKV1D-16P01601 117 aa11.79□□□□□ -0.52
HDAC6-229ENST00000486665 TFPTP0C1Z6 253 aa11.79□□□□□ -0.52
HDAC6-229ENST00000486665 TRHRP34981 398 aaPredicted RBP11.79□□□□□ -0.52
HDAC6-229ENST00000486665 MAGEA8P43361 318 aa11.79□□□□□ -0.52
HDAC6-229ENST00000486665 GSK3BP49841 420 aa11.79□□□□□ -0.52
HDAC6-229ENST00000486665 MLF1P58340 268 aa11.79□□□□□ -0.52
HDAC6-229ENST00000486665 FUT5Q11128 374 aa11.79□□□□□ -0.52
HDAC6-229ENST00000486665 FADDQ13158 208 aa11.79□□□□□ -0.52
HDAC6-229ENST00000486665 RAPSNQ13702 412 aa11.79□□□□□ -0.52
HDAC6-229ENST00000486665 ZNHIT3Q15649 155 aaPredicted RBP11.79□□□□□ -0.52
HDAC6-229ENST00000486665 SYPL1Q16563 259 aa11.79□□□□□ -0.52
HDAC6-229ENST00000486665 GCNT6Q5T4J0 391 aa11.79□□□□□ -0.52
HDAC6-229ENST00000486665 HEPHL1Q6MZM0 1159 aa11.79□□□□□ -0.52
HDAC6-229ENST00000486665 NET1Q7Z628 596 aaPredicted RBP11.79□□□□□ -0.52
HDAC6-229ENST00000486665 ARPINQ7Z6K5 226 aa11.79□□□□□ -0.52
HDAC6-229ENST00000486665 ZZZ3Q8IYH5 903 aa11.79□□□□□ -0.52
HDAC6-229ENST00000486665 PRR22Q8IZ63 422 aa11.79□□□□□ -0.52
HDAC6-229ENST00000486665 ARMC10Q8N2F6 343 aa11.79□□□□□ -0.52
HDAC6-229ENST00000486665 RNF148Q8N7C7 305 aa11.79□□□□□ -0.52
HDAC6-229ENST00000486665 ANKFN1Q8N957 763 aa11.79□□□□□ -0.52
HDAC6-229ENST00000486665 CLEC1AQ8NC01 280 aa11.79□□□□□ -0.52
HDAC6-229ENST00000486665 C17orf47Q8NEP4 570 aa11.79□□□□□ -0.52
HDAC6-229ENST00000486665 FAM110BQ8TC76 370 aa11.79□□□□□ -0.52
HDAC6-229ENST00000486665 MAL2Q969L2 176 aa11.79□□□□□ -0.52
HDAC6-229ENST00000486665 CLPTM1LQ96KA5 538 aa11.79□□□□□ -0.52
HDAC6-229ENST00000486665 CADM1Q9BY67 442 aaKnown RBP11.79□□□□□ -0.52
HDAC6-229ENST00000486665 ADNPQ9H2P0 1102 aa11.79□□□□□ -0.52
HDAC6-229ENST00000486665 SPAG4Q9NPE6 437 aa11.79□□□□□ -0.52
HDAC6-229ENST00000486665 DUSP22Q9NRW4 184 aa11.79□□□□□ -0.52
HDAC6-229ENST00000486665 FBXO34Q9NWN3 711 aa11.79□□□□□ -0.52
HDAC6-229ENST00000486665 NDE1Q9NXR1 346 aa11.79□□□□□ -0.52
HDAC6-229ENST00000486665 CD300AQ9UGN4 299 aa11.79□□□□□ -0.52
HDAC6-229ENST00000486665 CORO2BQ9UQ03 480 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms