RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 PDE7AQ13946 482 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 RBBP5Q15291 538 aaKnown RBP8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 INAQ16352 499 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 MEP1AQ16819 746 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 KHDRBS2Q5VWX1 349 aaKnown RBP8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 GLYATQ6IB77 296 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 ADNP2Q6IQ32 1131 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 IZUMO2Q6UXV1 221 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 RNF111Q6ZNA4 994 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 COMMD6Q7Z4G1 85 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 SERPINA11Q86U17 422 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 CALHM3Q86XJ0 350 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 SIAH3Q8IW03 269 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 PACRGLQ8N7B6 248 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 ANKFN1Q8N957 763 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 ICA1LQ8NDH6 482 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 SRFBP1Q8NEF9 429 aaKnown RBP8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 NFAM1Q8NET5 270 aaPredicted RBP8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 TRPV3Q8NET8 790 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 SUN3Q8TAQ9 357 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 M1APQ8TC57 530 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 ELP5Q8TE02 316 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 THAP3Q8WTV1 239 aaPredicted RBP8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 RGMAQ96B86 450 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 TBC1D20Q96BZ9 403 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 SMIM10Q96HG1 83 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 REXO5Q96IC2 774 aaKnown RBP8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 GPR137Q96N19 417 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 ZNF583Q96ND8 569 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 FRMD6Q96NE9 622 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 PTCHD1Q96NR3 888 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 NR1H4Q96RI1 486 aaPredicted RBP8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 CPPED1Q9BRF8 314 aaPredicted RBP8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 UTP23Q9BRU9 249 aaKnown RBP8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 DUSP26Q9BV47 211 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 MS4A8Q9BY19 250 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 UGT2B28Q9BY64 529 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 REXO4Q9GZR2 422 aaKnown RBP8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 RAD21L1Q9H4I0 556 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 KAT8Q9H7Z6 458 aaKnown RBP8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 BATF3Q9NR55 127 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 VAPAQ9P0L0 249 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 SLAMF8Q9P0V8 285 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 ZNF835Q9Y2P0 537 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 DTNAQ9Y4J8 743 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 PCDHB14Q9Y5E9 798 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 SLC22A7Q9Y694 548 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 AKAP9Q99996 3911 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 F8P00451 2351 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 PDZD2O15018 2839 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 ELOVL7A1L3X0 281 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 SCN2BO60939 215 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 GUCY1B2O75343 617 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 ETHE1O95571 254 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 TBX6O95947 436 aaPredicted RBP8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 TGFB1P01137 390 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 SP1P08047 785 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 GPX2P18283 190 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 FASP25445 335 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 PTPN6P29350 595 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 PTGER1P34995 402 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 PHC1P78364 1004 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 ALDH6A1Q02252 535 aaKnown RBP8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 TGM3Q08188 693 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 RUNX2Q13950 521 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 CYP51A1Q16850 503 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 ZNF630Q2M218 657 aaPredicted RBP8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 FAM98BQ52LJ0 330 aaKnown RBP8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 TOR1AIP1Q5JTV8 583 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 OR4F3Q6IEY1 312 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 FAM71E1Q6IPT2 247 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 SLC25A25Q6KCM7 469 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 CYP2R1Q6VVX0 501 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 RPS19BP1Q86WX3 136 aaKnown RBP8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 SPPL2CQ8IUH8 684 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 MSRB3Q8IXL7 192 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 MICU2Q8IYU8 434 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 ADGRG5Q8IZF4 528 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 SLC34A3Q8N130 599 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 EID3Q8N140 333 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 CA13Q8N1Q1 262 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 TRIML2Q8N7C3 387 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 GOT1L1Q8NHS2 421 aaPredicted RBP8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 CLHC1Q8NHS4 586 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 NT5CQ8TCD5 201 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 CREB3L4Q8TEY5 395 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 SLCO4A1Q96BD0 722 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 FAM120BQ96EK7 910 aaKnown RBP8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 CENPNQ96H22 339 aaPredicted RBP8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 EGLN2Q96KS0 407 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 PANX1Q96RD7 426 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 LPAR4Q99677 370 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 EBPLQ9BY08 206 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 MAGIXQ9H6Y5 334 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 COPS7BQ9H9Q2 264 aaPredicted RBP8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 SLC25A37Q9NYZ2 338 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 LRFN1Q9P244 771 aa8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 C19orf25Q9UFG5 118 aaPredicted RBP8.7□□□□□ -1.02
TMEM39A-208ENST00000486159 TEKT2Q9UIF3 430 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms