RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 JSRP1Q96MG2 331 aaPredicted RBP11.42□□□□□ -0.58
HMG20B-211ENST00000486028 RILPQ96NA2 401 aa11.42□□□□□ -0.58
HMG20B-211ENST00000486028 MS4A4EQ96PG1 132 aa11.42□□□□□ -0.58
HMG20B-211ENST00000486028 ADOQ96SZ5 270 aa11.42□□□□□ -0.58
HMG20B-211ENST00000486028 LMF2Q9BU23 707 aaKnown RBP11.42□□□□□ -0.58
HMG20B-211ENST00000486028 DEFB127Q9H1M4 99 aa11.42□□□□□ -0.58
HMG20B-211ENST00000486028 YY1AP1Q9H869 796 aa11.42□□□□□ -0.58
HMG20B-211ENST00000486028 ZDHHC11Q9H8X9 412 aa11.42□□□□□ -0.58
HMG20B-211ENST00000486028 EQTNQ9NQ60 294 aa11.42□□□□□ -0.58
HMG20B-211ENST00000486028 AIG1Q9NVV5 245 aa11.42□□□□□ -0.58
HMG20B-211ENST00000486028 B4GALT7Q9UBV7 327 aa11.42□□□□□ -0.58
HMG20B-211ENST00000486028 SNX8Q9Y5X2 465 aa11.42□□□□□ -0.58
HMG20B-211ENST00000486028 USH1CQ9Y6N9 552 aa11.42□□□□□ -0.58
HMG20B-211ENST00000486028 RELNP78509 3460 aa11.41□□□□□ -0.58
HMG20B-211ENST00000486028 TRGV8A0A0C4DH27 118 aa11.41□□□□□ -0.58
HMG20B-211ENST00000486028 LRRTM2O43300 516 aa11.41□□□□□ -0.58
HMG20B-211ENST00000486028 TSPAN2O60636 221 aa11.41□□□□□ -0.58
HMG20B-211ENST00000486028 SLC19A2O60779 497 aa11.41□□□□□ -0.58
HMG20B-211ENST00000486028 DIAPH2O60879 1101 aa11.41□□□□□ -0.58
HMG20B-211ENST00000486028 SEMA7AO75326 666 aa11.41□□□□□ -0.58
HMG20B-211ENST00000486028 TRIM3O75382 744 aaPredicted RBP11.41□□□□□ -0.58
HMG20B-211ENST00000486028 PDE9AO76083 593 aa11.41□□□□□ -0.58
HMG20B-211ENST00000486028 ZIC2O95409 532 aaPredicted RBP11.41□□□□□ -0.58
HMG20B-211ENST00000486028 TGDSO95455 350 aa11.41□□□□□ -0.58
HMG20B-211ENST00000486028 C6orf47O95873 294 aa11.41□□□□□ -0.58
HMG20B-211ENST00000486028 KIR3DL1P43629 444 aa11.41□□□□□ -0.58
HMG20B-211ENST00000486028 MASP1P48740 699 aa11.41□□□□□ -0.58
HMG20B-211ENST00000486028 CCT3P49368 545 aaKnown RBP11.41□□□□□ -0.58
HMG20B-211ENST00000486028 PRIM2P49643 509 aa11.41□□□□□ -0.58
HMG20B-211ENST00000486028 PNLIPRP2P54317 469 aa11.41□□□□□ -0.58
HMG20B-211ENST00000486028 SRSF1Q07955 248 aaKnown RBP eCLIP11.41□□□□□ -0.58
HMG20B-211ENST00000486028 DECR1Q16698 335 aa11.41□□□□□ -0.58
HMG20B-211ENST00000486028 ANXA8L1Q5VT79 327 aa11.41□□□□□ -0.58
HMG20B-211ENST00000486028 BICRALQ6AI39 1079 aa11.41□□□□□ -0.58
HMG20B-211ENST00000486028 SLC30A6Q6NXT4 461 aa11.41□□□□□ -0.58
HMG20B-211ENST00000486028 ARHGAP11AQ6P4F7 1023 aa11.41□□□□□ -0.58
HMG20B-211ENST00000486028 TMEM81Q6P7N7 255 aa11.41□□□□□ -0.58
HMG20B-211ENST00000486028 SPPL2CQ8IUH8 684 aa11.41□□□□□ -0.58
HMG20B-211ENST00000486028 VPS37AQ8NEZ2 397 aa11.41□□□□□ -0.58
HMG20B-211ENST00000486028 OR4N2Q8NGD1 307 aa11.41□□□□□ -0.58
HMG20B-211ENST00000486028 OR8J2Q8NGG1 315 aa11.41□□□□□ -0.58
HMG20B-211ENST00000486028 PSMA8Q8TAA3 256 aa11.41□□□□□ -0.58
HMG20B-211ENST00000486028 GPR151Q8TDV0 419 aa11.41□□□□□ -0.58
HMG20B-211ENST00000486028 CKAP2Q8WWK9 683 aa11.41□□□□□ -0.58
HMG20B-211ENST00000486028 TESCQ96BS2 214 aa11.41□□□□□ -0.58
HMG20B-211ENST00000486028 MAELQ96JY0 434 aaKnown RBP11.41□□□□□ -0.58
HMG20B-211ENST00000486028 ZNF597Q96LX8 424 aa11.41□□□□□ -0.58
HMG20B-211ENST00000486028 MAGEB18Q96M61 343 aa11.41□□□□□ -0.58
HMG20B-211ENST00000486028 ZBTB18Q99592 522 aa11.41□□□□□ -0.58
HMG20B-211ENST00000486028 NEUROD4Q9HD90 331 aa11.41□□□□□ -0.58
HMG20B-211ENST00000486028 SLCO1B3Q9NPD5 702 aa11.41□□□□□ -0.58
HMG20B-211ENST00000486028 SIRT3Q9NTG7 399 aaPredicted RBP11.41□□□□□ -0.58
HMG20B-211ENST00000486028 ZCCHC3Q9NUD5 404 aaKnown RBP11.41□□□□□ -0.58
HMG20B-211ENST00000486028 CBLCQ9ULV8 474 aa11.41□□□□□ -0.58
HMG20B-211ENST00000486028 PCDHGB4Q9UN71 923 aa11.41□□□□□ -0.58
HMG20B-211ENST00000486028 ZNF835Q9Y2P0 537 aa11.41□□□□□ -0.58
HMG20B-211ENST00000486028 NINQ8N4C6 2090 aa11.4□□□□□ -0.58
HMG20B-211ENST00000486028 A0A1B0GTH9 108 aa11.4□□□□□ -0.58
HMG20B-211ENST00000486028 PRAMEF25A6NGN4 478 aa11.4□□□□□ -0.58
HMG20B-211ENST00000486028 LRRC3CA6NJW4 275 aa11.4□□□□□ -0.58
HMG20B-211ENST00000486028 RNASET2O00584 256 aaKnown RBP11.4□□□□□ -0.58
HMG20B-211ENST00000486028 ZNF195O14628 629 aa11.4□□□□□ -0.58
HMG20B-211ENST00000486028 ANKRD28O15084 1053 aa11.4□□□□□ -0.58
HMG20B-211ENST00000486028 ICOSLGO75144 302 aa11.4□□□□□ -0.58
HMG20B-211ENST00000486028 SOX30O94993 753 aa11.4□□□□□ -0.58
HMG20B-211ENST00000486028 KCNH1O95259 989 aa11.4□□□□□ -0.58
HMG20B-211ENST00000486028 ALOX5P09917 674 aa11.4□□□□□ -0.58
HMG20B-211ENST00000486028 ALDOCP09972 364 aaKnown RBP11.4□□□□□ -0.58
HMG20B-211ENST00000486028 IDO1P14902 403 aa11.4□□□□□ -0.58
HMG20B-211ENST00000486028 ABOP16442 354 aa11.4□□□□□ -0.58
HMG20B-211ENST00000486028 S100A3P33764 101 aa11.4□□□□□ -0.58
HMG20B-211ENST00000486028 PTGS2P35354 604 aa11.4□□□□□ -0.58
HMG20B-211ENST00000486028 MAGEA5P43359 124 aa11.4□□□□□ -0.58
HMG20B-211ENST00000486028 GTF2A1P52655 376 aaPredicted RBP11.4□□□□□ -0.58
HMG20B-211ENST00000486028 PSMD4P55036 377 aaKnown RBP11.4□□□□□ -0.58
HMG20B-211ENST00000486028 NME5P56597 212 aa11.4□□□□□ -0.58
HMG20B-211ENST00000486028 PER3P56645 1201 aa11.4□□□□□ -0.58
HMG20B-211ENST00000486028 HSF1Q00613 529 aa11.4□□□□□ -0.58
HMG20B-211ENST00000486028 GSTA3Q16772 222 aa11.4□□□□□ -0.58
HMG20B-211ENST00000486028 DPY19L1Q2PZI1 675 aa11.4□□□□□ -0.58
HMG20B-211ENST00000486028 SLC9B1Q4ZJI4 515 aa11.4□□□□□ -0.58
HMG20B-211ENST00000486028 C1QL3Q5VWW1 255 aa11.4□□□□□ -0.58
HMG20B-211ENST00000486028 DESI1Q6ICB0 168 aa11.4□□□□□ -0.58
HMG20B-211ENST00000486028 OR4F3Q6IEY1 312 aa11.4□□□□□ -0.58
HMG20B-211ENST00000486028 MFSD12Q6NUT3 480 aa11.4□□□□□ -0.58
HMG20B-211ENST00000486028 BHLHB9Q6PI77 547 aa11.4□□□□□ -0.58
HMG20B-211ENST00000486028 EPGNQ6UW88 154 aa11.4□□□□□ -0.58
HMG20B-211ENST00000486028 Q6ZPB1 254 aaPredicted RBP11.4□□□□□ -0.58
HMG20B-211ENST00000486028 ACAD11Q709F0 780 aa11.4□□□□□ -0.58
HMG20B-211ENST00000486028 MAVSQ7Z434 540 aa11.4□□□□□ -0.58
HMG20B-211ENST00000486028 WDR53Q7Z5U6 358 aaPredicted RBP11.4□□□□□ -0.58
HMG20B-211ENST00000486028 RETREG3Q86VR2 466 aa11.4□□□□□ -0.58
HMG20B-211ENST00000486028 OR56A1Q8NGH5 318 aa11.4□□□□□ -0.58
HMG20B-211ENST00000486028 SLC9A6Q92581 669 aa11.4□□□□□ -0.58
HMG20B-211ENST00000486028 HOXB13Q92826 284 aaPredicted RBP11.4□□□□□ -0.58
HMG20B-211ENST00000486028 RELTQ969Z4 430 aa11.4□□□□□ -0.58
HMG20B-211ENST00000486028 MOAP1Q96BY2 351 aa11.4□□□□□ -0.58
HMG20B-211ENST00000486028 EFHD2Q96C19 240 aaPredicted RBP11.4□□□□□ -0.58
HMG20B-211ENST00000486028 FAM120BQ96EK7 910 aaKnown RBP11.4□□□□□ -0.58
HMG20B-211ENST00000486028 TMEM41AQ96HV5 264 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms