RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 LIME1Q9H400 295 aa23.34■■□□□ 1.33
HLA-F-227ENST00000485513 CCM2LQ9NUG4 571 aaPredicted RBP23.34■■□□□ 1.33
HLA-F-227ENST00000485513 JKAMPQ9P055 326 aa23.34■■□□□ 1.33
HLA-F-227ENST00000485513 OR10H1Q9Y4A9 318 aa23.34■■□□□ 1.33
HLA-F-227ENST00000485513 MAP1AP78559 2803 aaPredicted RBP23.33■■□□□ 1.33
HLA-F-227ENST00000485513 A0A1W2PPM1 405 aa23.33■■□□□ 1.33
HLA-F-227ENST00000485513 G3V2L1 256 aa23.33■■□□□ 1.33
HLA-F-227ENST00000485513 GLRA3O75311 464 aa23.33■■□□□ 1.33
HLA-F-227ENST00000485513 GRK2P25098 689 aa23.33■■□□□ 1.33
HLA-F-227ENST00000485513 MRPS22P82650 360 aaKnown RBP23.33■■□□□ 1.33
HLA-F-227ENST00000485513 ZNF155Q12901 538 aaPredicted RBP23.33■■□□□ 1.33
HLA-F-227ENST00000485513 DAZAP2Q15038 168 aaPredicted RBP23.33■■□□□ 1.33
HLA-F-227ENST00000485513 OR5M10Q6IEU7 315 aa23.33■■□□□ 1.33
HLA-F-227ENST00000485513 AAGABQ6PD74 315 aa23.33■■□□□ 1.33
HLA-F-227ENST00000485513 ADGRE4PQ86SQ3 457 aa23.33■■□□□ 1.33
HLA-F-227ENST00000485513 CDC20BQ86Y33 519 aa23.33■■□□□ 1.33
HLA-F-227ENST00000485513 RNF138Q8WVD3 245 aa23.33■■□□□ 1.33
HLA-F-227ENST00000485513 EFHD2Q96C19 240 aaPredicted RBP23.33■■□□□ 1.33
HLA-F-227ENST00000485513 SFXN2Q96NB2 322 aa23.33■■□□□ 1.33
HLA-F-227ENST00000485513 ZFP3Q96NJ6 502 aa23.33■■□□□ 1.33
HLA-F-227ENST00000485513 TM9SF2Q99805 663 aa23.33■■□□□ 1.33
HLA-F-227ENST00000485513 FOXC2Q99958 501 aa23.33■■□□□ 1.33
HLA-F-227ENST00000485513 DKKL1Q9UK85 242 aa23.33■■□□□ 1.33
HLA-F-227ENST00000485513 PRRC2AP48634 2157 aaKnown RBP23.33■■□□□ 1.32
HLA-F-227ENST00000485513 MYO1GB0I1T2 1018 aa23.32■■□□□ 1.32
HLA-F-227ENST00000485513 COQ9O75208 318 aa23.32■■□□□ 1.32
HLA-F-227ENST00000485513 JUNP05412 331 aaKnown RBP23.32■■□□□ 1.32
HLA-F-227ENST00000485513 STARP49675 285 aa23.32■■□□□ 1.32
HLA-F-227ENST00000485513 LHX2P50458 406 aa23.32■■□□□ 1.32
HLA-F-227ENST00000485513 NCBP2P52298 156 aaKnown RBP eCLIP23.32■■□□□ 1.32
HLA-F-227ENST00000485513 NAA20P61599 178 aa23.32■■□□□ 1.32
HLA-F-227ENST00000485513 SORDQ00796 357 aa23.32■■□□□ 1.32
HLA-F-227ENST00000485513 FOXF2Q12947 444 aa23.32■■□□□ 1.32
HLA-F-227ENST00000485513 OR4N2Q8NGD1 307 aa23.32■■□□□ 1.32
HLA-F-227ENST00000485513 WNT2BQ93097 391 aa23.32■■□□□ 1.32
HLA-F-227ENST00000485513 UCN2Q96RP3 112 aa23.32■■□□□ 1.32
HLA-F-227ENST00000485513 SFXN3Q9BWM7 321 aa23.32■■□□□ 1.32
HLA-F-227ENST00000485513 MIEF1Q9NQG6 463 aa23.32■■□□□ 1.32
HLA-F-227ENST00000485513 EDARQ9UNE0 448 aa23.32■■□□□ 1.32
HLA-F-227ENST00000485513 MRPS18CQ9Y3D5 142 aaKnown RBP23.32■■□□□ 1.32
HLA-F-227ENST00000485513 A0A087WV62 115 aa23.31■■□□□ 1.32
HLA-F-227ENST00000485513 CLCA1A8K7I4 914 aa23.31■■□□□ 1.32
HLA-F-227ENST00000485513 H3BQF6 201 aa23.31■■□□□ 1.32
HLA-F-227ENST00000485513 CRCPO75575 148 aa23.31■■□□□ 1.32
HLA-F-227ENST00000485513 RCBTB2O95199 551 aa23.31■■□□□ 1.32
HLA-F-227ENST00000485513 EPXP11678 715 aa23.31■■□□□ 1.32
HLA-F-227ENST00000485513 GAS1P54826 345 aa23.31■■□□□ 1.32
HLA-F-227ENST00000485513 PRSS53Q2L4Q9 553 aa23.31■■□□□ 1.32
HLA-F-227ENST00000485513 FAM71E1Q6IPT2 247 aa23.31■■□□□ 1.32
HLA-F-227ENST00000485513 FRMD7Q6ZUT3 714 aa23.31■■□□□ 1.32
HLA-F-227ENST00000485513 MED12LQ86YW9 2145 aa23.31■■□□□ 1.32
HLA-F-227ENST00000485513 G6PC3Q9BUM1 346 aa23.31■■□□□ 1.32
HLA-F-227ENST00000485513 CXXC4Q9H2H0 198 aa23.31■■□□□ 1.32
HLA-F-227ENST00000485513 MYNNQ9NPC7 610 aa23.31■■□□□ 1.32
HLA-F-227ENST00000485513 GRID1Q9ULK0 1009 aa23.31■■□□□ 1.32
HLA-F-227ENST00000485513 PLOD2O00469 737 aa23.3■■□□□ 1.32
HLA-F-227ENST00000485513 SLITRK5O94991 958 aa23.3■■□□□ 1.32
HLA-F-227ENST00000485513 PROCP04070 461 aa23.3■■□□□ 1.32
HLA-F-227ENST00000485513 TCEA1P23193 301 aaKnown RBP23.3■■□□□ 1.32
HLA-F-227ENST00000485513 CHMP24386 653 aa23.3■■□□□ 1.32
HLA-F-227ENST00000485513 DPP4P27487 766 aa23.3■■□□□ 1.32
HLA-F-227ENST00000485513 MC3RP41968 323 aa23.3■■□□□ 1.32
HLA-F-227ENST00000485513 PSG6Q00889 435 aa23.3■■□□□ 1.32
HLA-F-227ENST00000485513 CFAP157Q5JU67 520 aa23.3■■□□□ 1.32
HLA-F-227ENST00000485513 SH2D4BQ5SQS7 431 aa23.3■■□□□ 1.32
HLA-F-227ENST00000485513 FBXW10Q5XX13 1052 aa23.3■■□□□ 1.32
HLA-F-227ENST00000485513 TMEM107Q6UX40 140 aa23.3■■□□□ 1.32
HLA-F-227ENST00000485513 PLXDC2Q6UX71 529 aa23.3■■□□□ 1.32
HLA-F-227ENST00000485513 TRIM46Q7Z4K8 759 aa23.3■■□□□ 1.32
HLA-F-227ENST00000485513 GSPT2Q8IYD1 628 aaKnown RBP23.3■■□□□ 1.32
HLA-F-227ENST00000485513 OR4K17Q8NGC6 315 aa23.3■■□□□ 1.32
HLA-F-227ENST00000485513 FAM76AQ8TAV0 307 aa23.3■■□□□ 1.32
HLA-F-227ENST00000485513 LINC01560Q8TB33 94 aa23.3■■□□□ 1.32
HLA-F-227ENST00000485513 PUM2Q8TB72 1066 aaKnown RBP eCLIP23.3■■□□□ 1.32
HLA-F-227ENST00000485513 INTS12Q96CB8 462 aaKnown RBP23.3■■□□□ 1.32
HLA-F-227ENST00000485513 ACBD3Q9H3P7 528 aa23.3■■□□□ 1.32
HLA-F-227ENST00000485513 TAS2R7Q9NYW3 318 aa23.3■■□□□ 1.32
HLA-F-227ENST00000485513 CLCF1Q9UBD9 225 aa23.3■■□□□ 1.32
HLA-F-227ENST00000485513 PLEKHA6Q9Y2H5 1048 aa23.3■■□□□ 1.32
HLA-F-227ENST00000485513 RPH3AQ9Y2J0 694 aaPredicted RBP23.3■■□□□ 1.32
HLA-F-227ENST00000485513 POLR3HQ9Y535 204 aaPredicted RBP23.3■■□□□ 1.32
HLA-F-227ENST00000485513 ABCA4P78363 2273 aa23.3■■□□□ 1.32
HLA-F-227ENST00000485513 ZIC3O60481 467 aa23.29■■□□□ 1.32
HLA-F-227ENST00000485513 DNASE1P24855 282 aa23.29■■□□□ 1.32
HLA-F-227ENST00000485513 NTSP30990 170 aa23.29■■□□□ 1.32
HLA-F-227ENST00000485513 EVI2BP34910 448 aa23.29■■□□□ 1.32
HLA-F-227ENST00000485513 CLDN18P56856 261 aa23.29■■□□□ 1.32
HLA-F-227ENST00000485513 CCDC153Q494R4 210 aa23.29■■□□□ 1.32
HLA-F-227ENST00000485513 CYP27C1Q4G0S4 372 aa23.29■■□□□ 1.32
HLA-F-227ENST00000485513 SH2D5Q6ZV89 423 aa23.29■■□□□ 1.32
HLA-F-227ENST00000485513 RBM24Q9BX46 236 aaKnown RBP23.29■■□□□ 1.32
HLA-F-227ENST00000485513 GLIPR2Q9H4G4 154 aa23.29■■□□□ 1.32
HLA-F-227ENST00000485513 RRAGDQ9NQL2 400 aaPredicted RBP23.29■■□□□ 1.32
HLA-F-227ENST00000485513 PPP4R1LQ9P1A2 415 aa23.29■■□□□ 1.32
HLA-F-227ENST00000485513 C19orf53Q9UNZ5 99 aaPredicted RBP23.29■■□□□ 1.32
HLA-F-227ENST00000485513 WBP11Q9Y2W2 641 aaKnown RBP23.29■■□□□ 1.32
HLA-F-227ENST00000485513 B4DXG7 233 aa23.28■■□□□ 1.32
HLA-F-227ENST00000485513 SCO2O43819 266 aa23.28■■□□□ 1.32
HLA-F-227ENST00000485513 PLIN3O60664 434 aa23.28■■□□□ 1.32
HLA-F-227ENST00000485513 RSL1D1O76021 490 aaKnown RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms