RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 ECSCRQ19T08 205 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 HKDC1Q2TB90 917 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 ANKRD55Q3KP44 614 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 ACSF3Q4G176 576 aaPredicted RBP1.78□□□□□ -2.12
ITGB1-213ENST00000484088 FBXO48Q5FWF7 155 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 TOR1AIP1Q5JTV8 583 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 SEL1L2Q5TEA6 688 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 METTL11BQ5VVY1 283 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 LEMD1Q68G75 181 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 HIST2H2AA3Q6FI13 130 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 RTL6Q6ICC9 239 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 SASS6Q6UVJ0 657 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 ATRAIDQ6UW56 229 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 ZYG11AQ6WRX3 759 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 ZNF841Q6ZN19 808 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 RGS9BPQ6ZS82 235 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 NLRP9Q7RTR0 991 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 PRSS48Q7RTY5 328 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 CTAGE6Q86UF2 777 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 GTSCR1Q86UQ5 136 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 RNF130Q86XS8 419 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 HDDC3Q8N4P3 179 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 RNF148Q8N7C7 305 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 POM121L12Q8N7R1 296 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 RDH11Q8TC12 318 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 ITLN1Q8WWA0 313 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 DYDC1Q8WWB3 177 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 PIBF1Q8WXW3 757 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 NCLNQ969V3 563 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 SLC25A36Q96CQ1 311 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 RAB3CQ96E17 227 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 CNOT6LQ96LI5 555 aaKnown RBP1.78□□□□□ -2.12
ITGB1-213ENST00000484088 FOXN4Q96NZ1 517 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 DEFB118Q96PH6 123 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 CPXM1Q96SM3 734 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 SOSTQ9BQB4 213 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 CHCHD5Q9BSY4 110 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 TEX13BQ9BXU2 312 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 FTHL17Q9BXU8 183 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 CCSER1Q9C0I3 900 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 STRADBQ9C0K7 418 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 ABCG8Q9H221 673 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 C1orf21Q9H246 121 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 XKR8Q9H6D3 395 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 HEXA-AS1Q9H8Q6 139 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 IL1RL2Q9HB29 575 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 UBE2TQ9NPD8 197 aaPredicted RBP1.78□□□□□ -2.12
ITGB1-213ENST00000484088 HOMER3Q9NSC5 361 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 FKBP14Q9NWM8 211 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 AATFQ9NY61 560 aaKnown RBP eCLIP1.78□□□□□ -2.122e-7■□□□□ 10.9
ITGB1-213ENST00000484088 GTSE1Q9NYZ3 720 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 COPS7AQ9UBW8 275 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 TUBGCP4Q9UGJ1 667 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 RSPH14Q9UHP6 348 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 PAIP2BQ9ULR5 123 aaKnown RBP1.78□□□□□ -2.12
ITGB1-213ENST00000484088 CBY1Q9Y3M2 126 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 ZNF175Q9Y473 711 aa1.78□□□□□ -2.12
ITGB1-213ENST00000484088 V9GYY5 206 aaPredicted RBP1.78□□□□□ -2.12
ITGB1-213ENST00000484088 KANK1Q14678 1352 aa1.77□□□□□ -2.13
ITGB1-213ENST00000484088 MAP3K19Q56UN5 1328 aa1.77□□□□□ -2.13
ITGB1-213ENST00000484088 RNF103-CHMP3A0A140T963 221 aa1.77□□□□□ -2.13
ITGB1-213ENST00000484088 TEX48A0A1B0GUV7 120 aa1.77□□□□□ -2.13
ITGB1-213ENST00000484088 SYCE3A1L190 88 aa1.77□□□□□ -2.13
ITGB1-213ENST00000484088 KRT87PA6NCN2 255 aa1.77□□□□□ -2.13
ITGB1-213ENST00000484088 OR6C65A6NJZ3 312 aa1.77□□□□□ -2.13
ITGB1-213ENST00000484088 ERI2A8K979 691 aaKnown RBP1.77□□□□□ -2.13
ITGB1-213ENST00000484088 GPR89AB7ZAQ6 455 aa1.77□□□□□ -2.13
ITGB1-213ENST00000484088 H0YIV9 168 aa1.77□□□□□ -2.13
ITGB1-213ENST00000484088 PDLIM1O00151 329 aa1.77□□□□□ -2.13
ITGB1-213ENST00000484088 EEF2KO00418 725 aaKnown RBP1.77□□□□□ -2.13
ITGB1-213ENST00000484088 NDUFAB1O14561 156 aa1.77□□□□□ -2.13
ITGB1-213ENST00000484088 TRDMT1O14717 391 aaKnown RBP1.77□□□□□ -2.13
ITGB1-213ENST00000484088 IMPA2O14732 288 aa1.77□□□□□ -2.13
ITGB1-213ENST00000484088 NVLO15381 856 aaKnown RBP1.77□□□□□ -2.13
ITGB1-213ENST00000484088 PHF1O43189 567 aaPredicted RBP1.77□□□□□ -2.13
ITGB1-213ENST00000484088 PRPSAP2O60256 369 aa1.77□□□□□ -2.13
ITGB1-213ENST00000484088 ZNF253O75346 499 aa1.77□□□□□ -2.13
ITGB1-213ENST00000484088 TRIM16O95361 564 aa1.77□□□□□ -2.13
ITGB1-213ENST00000484088 NPPAP01160 153 aa1.77□□□□□ -2.13
ITGB1-213ENST00000484088 HIST1H2AGP0C0S8 130 aaPredicted RBP1.77□□□□□ -2.13
ITGB1-213ENST00000484088 GPR89BP0CG08 455 aa1.77□□□□□ -2.13
ITGB1-213ENST00000484088 IDO1P14902 403 aa1.77□□□□□ -2.13
ITGB1-213ENST00000484088 ZNF18P17022 549 aa1.77□□□□□ -2.13
ITGB1-213ENST00000484088 POLR2EP19388 210 aaKnown RBP1.77□□□□□ -2.13
ITGB1-213ENST00000484088 NUP62P37198 522 aaPredicted RBP1.77□□□□□ -2.13
ITGB1-213ENST00000484088 CAPGP40121 348 aa1.77□□□□□ -2.13
ITGB1-213ENST00000484088 ACADSBP45954 432 aa1.77□□□□□ -2.13
ITGB1-213ENST00000484088 CAMLGP49069 296 aa1.77□□□□□ -2.13
ITGB1-213ENST00000484088 SLC8A3P57103 927 aa1.77□□□□□ -2.13
ITGB1-213ENST00000484088 DSCR10P59022 87 aa1.77□□□□□ -2.13
ITGB1-213ENST00000484088 GMFBP60983 142 aa1.77□□□□□ -2.13
ITGB1-213ENST00000484088 SSTP61278 116 aa1.77□□□□□ -2.13
ITGB1-213ENST00000484088 TPM4P67936 248 aa1.77□□□□□ -2.13
ITGB1-213ENST00000484088 ZNF33BQ06732 778 aa1.77□□□□□ -2.13
ITGB1-213ENST00000484088 PPIDQ08752 370 aaKnown RBP1.77□□□□□ -2.13
ITGB1-213ENST00000484088 KLHL30Q0D2K2 578 aa1.77□□□□□ -2.13
ITGB1-213ENST00000484088 SPP2Q13103 211 aa1.77□□□□□ -2.13
ITGB1-213ENST00000484088 CUL2Q13617 745 aa1.77□□□□□ -2.13
ITGB1-213ENST00000484088 TGIF1Q15583 401 aa1.77□□□□□ -2.13
ITGB1-213ENST00000484088 LTB4RQ15722 352 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms