RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 VSTM2LQ96N03 204 aa11.57□□□□□ -0.56
UBR4-213ENST00000483922 NSUN5Q96P11 429 aaKnown RBP11.57□□□□□ -0.56
UBR4-213ENST00000483922 BTBD9Q96Q07 612 aa11.57□□□□□ -0.56
UBR4-213ENST00000483922 SERPINI1Q99574 410 aa11.57□□□□□ -0.56
UBR4-213ENST00000483922 SLC39A3Q9BRY0 314 aa11.57□□□□□ -0.56
UBR4-213ENST00000483922 LRRC1Q9BTT6 524 aa11.57□□□□□ -0.56
UBR4-213ENST00000483922 PINK1Q9BXM7 581 aa11.57□□□□□ -0.56
UBR4-213ENST00000483922 REG4Q9BYZ8 158 aa11.57□□□□□ -0.56
UBR4-213ENST00000483922 PLSCR4Q9NRQ2 329 aa11.57□□□□□ -0.56
UBR4-213ENST00000483922 MED11Q9P086 117 aa11.57□□□□□ -0.56
UBR4-213ENST00000483922 ADAM29Q9UKF5 820 aa11.57□□□□□ -0.56
UBR4-213ENST00000483922 C1orf226A1L170 272 aa11.56□□□□□ -0.56
UBR4-213ENST00000483922 OR2M5A3KFT3 312 aa11.56□□□□□ -0.56
UBR4-213ENST00000483922 GOLGA6L6A8MZA4 724 aa11.56□□□□□ -0.56
UBR4-213ENST00000483922 HS3ST1O14792 307 aa11.56□□□□□ -0.56
UBR4-213ENST00000483922 FADS1O60427 444 aa11.56□□□□□ -0.56
UBR4-213ENST00000483922 NDUFS7O75251 213 aa11.56□□□□□ -0.56
UBR4-213ENST00000483922 C2P06681 752 aa11.56□□□□□ -0.56
UBR4-213ENST00000483922 SOD3P08294 240 aa11.56□□□□□ -0.56
UBR4-213ENST00000483922 PEPDP12955 493 aa11.56□□□□□ -0.56
UBR4-213ENST00000483922 CSNK2A2P19784 350 aaPredicted RBP11.56□□□□□ -0.56
UBR4-213ENST00000483922 DSCR4P56555 118 aaPredicted RBP11.56□□□□□ -0.56
UBR4-213ENST00000483922 DMTNQ08495 405 aa11.56□□□□□ -0.56
UBR4-213ENST00000483922 TRAF3Q13114 568 aa11.56□□□□□ -0.56
UBR4-213ENST00000483922 PON3Q15166 354 aa11.56□□□□□ -0.56
UBR4-213ENST00000483922 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.56□□□□□ -0.56
UBR4-213ENST00000483922 CLEC12BQ2HXU8 276 aa11.56□□□□□ -0.56
UBR4-213ENST00000483922 PRSS53Q2L4Q9 553 aa11.56□□□□□ -0.56
UBR4-213ENST00000483922 EXOC3L2Q2M3D2 409 aa11.56□□□□□ -0.56
UBR4-213ENST00000483922 SCIMPQ6UWF3 145 aa11.56□□□□□ -0.56
UBR4-213ENST00000483922 FAM214BQ7L5A3 538 aa11.56□□□□□ -0.56
UBR4-213ENST00000483922 TBC1D1Q86TI0 1168 aaPredicted RBP11.56□□□□□ -0.56
UBR4-213ENST00000483922 ATG4DQ86TL0 474 aaPredicted RBP11.56□□□□□ -0.56
UBR4-213ENST00000483922 CCDC116Q8IYX3 515 aa11.56□□□□□ -0.56
UBR4-213ENST00000483922 PLD6Q8N2A8 252 aaKnown RBP11.56□□□□□ -0.56
UBR4-213ENST00000483922 PPM1NQ8N819 430 aa11.56□□□□□ -0.56
UBR4-213ENST00000483922 KAT2AQ92830 837 aa11.56□□□□□ -0.56
UBR4-213ENST00000483922 EFHD2Q96C19 240 aaPredicted RBP11.56□□□□□ -0.56
UBR4-213ENST00000483922 REPS1Q96D71 796 aa11.56□□□□□ -0.56
UBR4-213ENST00000483922 PLPPR2Q96GM1 343 aa11.56□□□□□ -0.56
UBR4-213ENST00000483922 NPAS1Q99742 590 aa11.56□□□□□ -0.56
UBR4-213ENST00000483922 DKKL1Q9UK85 242 aa11.56□□□□□ -0.56
UBR4-213ENST00000483922 PROCRQ9UNN8 238 aa11.56□□□□□ -0.56
UBR4-213ENST00000483922 CFL2Q9Y281 166 aa11.56□□□□□ -0.56
UBR4-213ENST00000483922 ABCA1O95477 2261 aa11.56□□□□□ -0.56
UBR4-213ENST00000483922 SHISA8B8ZZ34 492 aa11.55□□□□□ -0.56
UBR4-213ENST00000483922 SEC14L5O43304 696 aa11.55□□□□□ -0.56
UBR4-213ENST00000483922 DANCRP0C864 163 aa11.55□□□□□ -0.56
UBR4-213ENST00000483922 GFAPP14136 432 aa11.55□□□□□ -0.56
UBR4-213ENST00000483922 CRABP2P29373 138 aa11.55□□□□□ -0.56
UBR4-213ENST00000483922 MAPK12P53778 367 aa11.55□□□□□ -0.56
UBR4-213ENST00000483922 PNLIPRP2P54317 469 aa11.55□□□□□ -0.56
UBR4-213ENST00000483922 PHEXP78562 749 aa11.55□□□□□ -0.56
UBR4-213ENST00000483922 ZNF844Q08AG5 666 aa11.55□□□□□ -0.56
UBR4-213ENST00000483922 SLMAPQ14BN4 828 aa11.55□□□□□ -0.56
UBR4-213ENST00000483922 TMEM44Q2T9K0 475 aa11.55□□□□□ -0.56
UBR4-213ENST00000483922 SGO1Q5FBB7 561 aa11.55□□□□□ -0.56
UBR4-213ENST00000483922 BEX5Q5H9J7 111 aa11.55□□□□□ -0.56
UBR4-213ENST00000483922 FRG2Q64ET8 278 aa11.55□□□□□ -0.56
UBR4-213ENST00000483922 LARP4Q71RC2 724 aaKnown RBP eCLIP11.55□□□□□ -0.56
UBR4-213ENST00000483922 GGNQ86UU5 652 aa11.55□□□□□ -0.56
UBR4-213ENST00000483922 CTAGE3PQ8IX95 158 aa11.55□□□□□ -0.56
UBR4-213ENST00000483922 AKAP1Q92667 903 aaKnown RBP eCLIP11.55□□□□□ -0.56
UBR4-213ENST00000483922 CDKL2Q92772 493 aa11.55□□□□□ -0.56
UBR4-213ENST00000483922 CAVIN3Q969G5 261 aa11.55□□□□□ -0.56
UBR4-213ENST00000483922 KLHL29Q96CT2 875 aa11.55□□□□□ -0.56
UBR4-213ENST00000483922 FRG2BQ96QU4 278 aa11.55□□□□□ -0.56
UBR4-213ENST00000483922 NTMT1Q9BV86 223 aa11.55□□□□□ -0.56
UBR4-213ENST00000483922 GRHL1Q9NZI5 618 aa11.55□□□□□ -0.56
UBR4-213ENST00000483922 TXNDC16Q9P2K2 825 aa11.55□□□□□ -0.56
UBR4-213ENST00000483922 PRODH2Q9UF12 536 aa11.55□□□□□ -0.56
UBR4-213ENST00000483922 ZNF225Q9UK10 706 aa11.55□□□□□ -0.56
UBR4-213ENST00000483922 CLEC4AQ9UMR7 237 aa11.55□□□□□ -0.56
UBR4-213ENST00000483922 LAMP3Q9UQV4 416 aa11.55□□□□□ -0.56
UBR4-213ENST00000483922 ZNF175Q9Y473 711 aa11.55□□□□□ -0.56
UBR4-213ENST00000483922 GOLGA6L10A6NI86 522 aa11.54□□□□□ -0.56
UBR4-213ENST00000483922 GPRIN2O60269 458 aa11.54□□□□□ -0.56
UBR4-213ENST00000483922 PDYNP01213 254 aa11.54□□□□□ -0.56
UBR4-213ENST00000483922 HK1P19367 917 aa11.54□□□□□ -0.56
UBR4-213ENST00000483922 IL11P20809 199 aa11.54□□□□□ -0.56
UBR4-213ENST00000483922 DEKP35659 375 aaKnown RBP11.54□□□□□ -0.56
UBR4-213ENST00000483922 ACVR1BP36896 505 aa11.54□□□□□ -0.56
UBR4-213ENST00000483922 ACAP2Q15057 778 aa11.54□□□□□ -0.56
UBR4-213ENST00000483922 TRADDQ15628 312 aa11.54□□□□□ -0.56
UBR4-213ENST00000483922 CTU2Q2VPK5 515 aaKnown RBP11.54□□□□□ -0.56
UBR4-213ENST00000483922 UBAP2Q5T6F2 1119 aaKnown RBP11.54□□□□□ -0.56
UBR4-213ENST00000483922 PODNL1Q6PEZ8 512 aa11.54□□□□□ -0.56
UBR4-213ENST00000483922 APOOLQ6UXV4 268 aa11.54□□□□□ -0.56
UBR4-213ENST00000483922 METTL25Q8N6Q8 603 aa11.54□□□□□ -0.56
UBR4-213ENST00000483922 OR9A2Q8NGT5 310 aa11.54□□□□□ -0.56
UBR4-213ENST00000483922 ZNF675Q8TD23 568 aa11.54□□□□□ -0.56
UBR4-213ENST00000483922 FBF1Q8TES7 1133 aa11.54□□□□□ -0.56
UBR4-213ENST00000483922 DUSP19Q8WTR2 217 aa11.54□□□□□ -0.56
UBR4-213ENST00000483922 DPH5Q9H2P9 285 aa11.54□□□□□ -0.56
UBR4-213ENST00000483922 FOLH1BQ9HBA9 442 aa11.54□□□□□ -0.56
UBR4-213ENST00000483922 YAE1D1Q9NRH1 226 aa11.54□□□□□ -0.56
UBR4-213ENST00000483922 CPSF2Q9P2I0 782 aaKnown RBP11.54□□□□□ -0.56
UBR4-213ENST00000483922 A0A096LNT2 108 aa11.53□□□□□ -0.56
UBR4-213ENST00000483922 SYCE1LA8MT33 242 aa11.53□□□□□ -0.56
UBR4-213ENST00000483922 H3BML4 177 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms