RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 OR2M3Q8NG83 312 aa9.73□□□□□ -0.85
SMARCC1-205ENST00000483847 OR4K17Q8NGC6 315 aa9.73□□□□□ -0.85
SMARCC1-205ENST00000483847 OR6K3Q8NGY3 331 aa9.73□□□□□ -0.85
SMARCC1-205ENST00000483847 WDR20Q8TBZ3 569 aa9.73□□□□□ -0.85
SMARCC1-205ENST00000483847 LRRC39Q96DD0 335 aa9.73□□□□□ -0.85
SMARCC1-205ENST00000483847 TSPAN17Q96FV3 270 aa9.73□□□□□ -0.85
SMARCC1-205ENST00000483847 ATOH8Q96SQ7 321 aa9.73□□□□□ -0.85
SMARCC1-205ENST00000483847 KCNK17Q96T54 332 aa9.73□□□□□ -0.85
SMARCC1-205ENST00000483847 DDX47Q9H0S4 455 aaKnown RBP9.73□□□□□ -0.85
SMARCC1-205ENST00000483847 RNF11Q9Y3C5 154 aa9.73□□□□□ -0.85
SMARCC1-205ENST00000483847 SCO2O43819 266 aa9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 ERAL1O75616 437 aaKnown RBP9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 CD8AP01732 235 aa9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 CTAGE8P0CG41 777 aa9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 MTHFD2P13995 350 aa9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 PCSK2P16519 638 aa9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 STMN1P16949 149 aa9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 PTNP21246 168 aa9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 PHEXP78562 749 aa9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 RUNX1T1Q06455 604 aa9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 PDIA2Q13087 525 aaKnown RBP9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 SLMAPQ14BN4 828 aa9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 MORF4L2Q15014 288 aa9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 TSC22D1Q15714 1073 aa9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 ZKSCAN8Q15776 578 aaPredicted RBP9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 NCMAPQ5T1S8 102 aa9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 LIPJQ5W064 366 aa9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 PPP4R4Q6NUP7 873 aa9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 SLC48A1Q6P1K1 146 aa9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 NPSR1Q6W5P4 371 aa9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 LARP4Q71RC2 724 aaKnown RBP eCLIP9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 GGNQ86UU5 652 aa9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 CTAGE4Q8IX94 777 aa9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 METTL25Q8N6Q8 603 aa9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 KBTBD8Q8NFY9 601 aa9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 OR4N2Q8NGD1 307 aa9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 STAG3L4Q8TBR4 150 aa9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 S100PBPQ96BU1 408 aa9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 EFHD2Q96C19 240 aaPredicted RBP9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 PBKQ96KB5 322 aa9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 HS6ST2Q96MM7 605 aa9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 NAP1L3Q99457 506 aaPredicted RBP9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 GPR22Q99680 433 aa9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 LRRC1Q9BTT6 524 aa9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 MRPL1Q9BYD6 325 aaKnown RBP9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 RTN4RQ9BZR6 473 aa9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 MED11Q9P086 117 aa9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 PPP4R1LQ9P1A2 415 aa9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 EMC9Q9Y3B6 208 aa9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 ALPK2Q86TB3 2170 aa9.72□□□□□ -0.85
SMARCC1-205ENST00000483847 CADP27708 2225 aa9.71□□□□□ -0.85
SMARCC1-205ENST00000483847 UQCRHLA0A096LP55 91 aa9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 A0A1W2PP18 115 aa9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 FAM234BA2RU67 622 aa9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 GOLGA6L10A6NI86 522 aa9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 SHISA8B8ZZ34 492 aa9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 FOXE1O00358 373 aaPredicted RBP9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 TP73O15350 636 aa9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 KERAO60938 352 aa9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 SS18L1O75177 396 aaPredicted RBP9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 SEMA3DO95025 777 aa9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 CD3EP07766 207 aa9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 FCGR2AP12318 317 aa9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 CSNK2A2P19784 350 aaPredicted RBP9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 RAB10P61026 200 aa9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 STX5Q13190 355 aa9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 EFR3AQ14156 821 aa9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 SGCBQ16585 318 aa9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 ZNF672Q499Z4 452 aaPredicted RBP9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 CCNYL2Q5T2Q4 361 aa9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 IL17RELQ6ZVW7 336 aa9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 ZNF619Q8N2I2 560 aa9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 GBP7Q8N8V2 638 aaPredicted RBP9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 ROBO4Q8WZ75 1007 aa9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 DTNBP1Q96EV8 351 aa9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 C11orf24Q96F05 449 aaPredicted RBP9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 CNRIP1Q96F85 164 aaPredicted RBP9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 BTBD9Q96Q07 612 aa9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 TNFRSF13CQ96RJ3 184 aa9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 RBBP8Q99708 897 aa9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 RHNO1Q9BSD3 238 aa9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 TACO1Q9BSH4 297 aaKnown RBP9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 TRAF4Q9BUZ4 470 aaPredicted RBP9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 STMN4Q9H169 189 aaPredicted RBP9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 FOLH1BQ9HBA9 442 aa9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 TMEM160Q9NX00 188 aa9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 NSMCE4AQ9NXX6 385 aa9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 FLRT3Q9NZU0 649 aa9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 WHRNQ9P202 907 aa9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 PRODH2Q9UF12 536 aa9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 GPR52Q9Y2T5 361 aa9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 ANGPTL3Q9Y5C1 460 aa9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 PCDHA9Q9Y5H5 950 aa9.71□□□□□ -0.86
SMARCC1-205ENST00000483847 C1orf226A1L170 272 aa9.7□□□□□ -0.86
SMARCC1-205ENST00000483847 NTN1O95631 604 aa9.7□□□□□ -0.86
SMARCC1-205ENST00000483847 PLGP00747 810 aaPredicted RBP9.7□□□□□ -0.86
SMARCC1-205ENST00000483847 ALDOAP04075 364 aaKnown RBP9.7□□□□□ -0.86
SMARCC1-205ENST00000483847 ZNF16P17020 682 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms