RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 ZFP64Q9NPA5 681 aa19.19■□□□□ 0.66
SEC13-217ENST00000482647 FAM120CQ9NX05 1096 aaKnown RBP19.19■□□□□ 0.66
SEC13-217ENST00000482647 SHANK1Q9Y566 2161 aa19.19■□□□□ 0.66
SEC13-217ENST00000482647 HS6ST1O60243 411 aa19.18■□□□□ 0.66
SEC13-217ENST00000482647 SOX30O94993 753 aa19.18■□□□□ 0.66
SEC13-217ENST00000482647 NKX2-2O95096 273 aa19.18■□□□□ 0.66
SEC13-217ENST00000482647 KCNH1O95259 989 aa19.18■□□□□ 0.66
SEC13-217ENST00000482647 CPSF4O95639 269 aaKnown RBP19.18■□□□□ 0.66
SEC13-217ENST00000482647 HMGN2P05204 90 aaKnown RBP19.18■□□□□ 0.66
SEC13-217ENST00000482647 IL6P05231 212 aa19.18■□□□□ 0.66
SEC13-217ENST00000482647 PGRP06401 933 aa19.18■□□□□ 0.66
SEC13-217ENST00000482647 ALOX5P09917 674 aa19.18■□□□□ 0.66
SEC13-217ENST00000482647 IL12AP29459 219 aa19.18■□□□□ 0.66
SEC13-217ENST00000482647 MAP3K8P41279 467 aa19.18■□□□□ 0.66
SEC13-217ENST00000482647 DGKQP52824 942 aa19.18■□□□□ 0.66
SEC13-217ENST00000482647 PSMD4P55036 377 aaKnown RBP19.18■□□□□ 0.66
SEC13-217ENST00000482647 STX1BP61266 288 aa19.18■□□□□ 0.66
SEC13-217ENST00000482647 LRRC74AQ0VAA2 488 aa19.18■□□□□ 0.66
SEC13-217ENST00000482647 TP53BP2Q13625 1128 aa19.18■□□□□ 0.66
SEC13-217ENST00000482647 HYAL4Q2M3T9 481 aa19.18■□□□□ 0.66
SEC13-217ENST00000482647 EIF2S3LQ2VIR3 472 aaKnown RBP19.18■□□□□ 0.66
SEC13-217ENST00000482647 SLC30A6Q6NXT4 461 aa19.18■□□□□ 0.66
SEC13-217ENST00000482647 TMEM81Q6P7N7 255 aa19.18■□□□□ 0.66
SEC13-217ENST00000482647 ANKRD46Q86W74 232 aa19.18■□□□□ 0.66
SEC13-217ENST00000482647 PRR7Q8TB68 274 aa19.18■□□□□ 0.66
SEC13-217ENST00000482647 STON2Q8WXE9 905 aa19.18■□□□□ 0.66
SEC13-217ENST00000482647 EFHD2Q96C19 240 aaPredicted RBP19.18■□□□□ 0.66
SEC13-217ENST00000482647 JSRP1Q96MG2 331 aaPredicted RBP19.18■□□□□ 0.66
SEC13-217ENST00000482647 RILPQ96NA2 401 aa19.18■□□□□ 0.66
SEC13-217ENST00000482647 OR52E6Q96RD3 313 aa19.18■□□□□ 0.66
SEC13-217ENST00000482647 NODALQ96S42 347 aa19.18■□□□□ 0.66
SEC13-217ENST00000482647 BTNL2Q9UIR0 455 aa19.18■□□□□ 0.66
SEC13-217ENST00000482647 FAF1Q9UNN5 650 aaPredicted RBP19.18■□□□□ 0.66
SEC13-217ENST00000482647 FAM166BA8MTA8 275 aa19.17■□□□□ 0.66
SEC13-217ENST00000482647 C9JVG2 144 aa19.17■□□□□ 0.66
SEC13-217ENST00000482647 KRT16P08779 473 aa19.17■□□□□ 0.66
SEC13-217ENST00000482647 SOAT1P35610 550 aa19.17■□□□□ 0.66
SEC13-217ENST00000482647 GUCY1A3Q02108 690 aa19.17■□□□□ 0.66
SEC13-217ENST00000482647 RBPJQ06330 500 aa19.17■□□□□ 0.66
SEC13-217ENST00000482647 LASP1Q14847 261 aaKnown RBP19.17■□□□□ 0.66
SEC13-217ENST00000482647 BICRALQ6AI39 1079 aa19.17■□□□□ 0.66
SEC13-217ENST00000482647 DESI1Q6ICB0 168 aa19.17■□□□□ 0.66
SEC13-217ENST00000482647 SLC16A11Q8NCK7 471 aa19.17■□□□□ 0.66
SEC13-217ENST00000482647 PIK3R3Q92569 461 aa19.17■□□□□ 0.66
SEC13-217ENST00000482647 JADE3Q92613 823 aa19.17■□□□□ 0.66
SEC13-217ENST00000482647 THOC1Q96FV9 657 aaKnown RBP19.17■□□□□ 0.66
SEC13-217ENST00000482647 CCDC115Q96NT0 180 aa19.17■□□□□ 0.66
SEC13-217ENST00000482647 YIPF4Q9BSR8 244 aa19.17■□□□□ 0.66
SEC13-217ENST00000482647 ACTRT3Q9BYD9 372 aa19.17■□□□□ 0.66
SEC13-217ENST00000482647 NPHS2Q9NP85 383 aa19.17■□□□□ 0.66
SEC13-217ENST00000482647 KLRF1Q9NZS2 232 aa19.17■□□□□ 0.66
SEC13-217ENST00000482647 DCTN4Q9UJW0 460 aa19.17■□□□□ 0.66
SEC13-217ENST00000482647 FLNCQ14315 2725 aa19.16■□□□□ 0.66
SEC13-217ENST00000482647 GXYLT2A0PJZ3 443 aa19.16■□□□□ 0.66
SEC13-217ENST00000482647 PRAMEF25A6NGN4 478 aa19.16■□□□□ 0.66
SEC13-217ENST00000482647 DYNC1I1O14576 645 aa19.16■□□□□ 0.66
SEC13-217ENST00000482647 TRIM3O75382 744 aaPredicted RBP19.16■□□□□ 0.66
SEC13-217ENST00000482647 WISP2O76076 250 aa19.16■□□□□ 0.66
SEC13-217ENST00000482647 IL33O95760 270 aa19.16■□□□□ 0.66
SEC13-217ENST00000482647 VIMP08670 466 aaKnown RBP19.16■□□□□ 0.66
SEC13-217ENST00000482647 MASP1P48740 699 aa19.16■□□□□ 0.66
SEC13-217ENST00000482647 KCNK10P57789 538 aa19.16■□□□□ 0.66
SEC13-217ENST00000482647 DUSP5Q16690 384 aa19.16■□□□□ 0.66
SEC13-217ENST00000482647 CMPK2Q5EBM0 449 aa19.16■□□□□ 0.66
SEC13-217ENST00000482647 PAOXQ6QHF9 649 aa19.16■□□□□ 0.66
SEC13-217ENST00000482647 GHDCQ8N2G8 530 aa19.16■□□□□ 0.66
SEC13-217ENST00000482647 FAM109AQ8N4B1 249 aa19.16■□□□□ 0.66
SEC13-217ENST00000482647 TMEM251Q8N6I4 163 aa19.16■□□□□ 0.66
SEC13-217ENST00000482647 OR52N2Q8NGI0 321 aa19.16■□□□□ 0.66
SEC13-217ENST00000482647 FBXO30Q8TB52 745 aa19.16■□□□□ 0.66
SEC13-217ENST00000482647 CHMP6Q96FZ7 201 aa19.16■□□□□ 0.66
SEC13-217ENST00000482647 ZNF597Q96LX8 424 aa19.16■□□□□ 0.66
SEC13-217ENST00000482647 STACQ99469 402 aa19.16■□□□□ 0.66
SEC13-217ENST00000482647 DEFB127Q9H1M4 99 aa19.16■□□□□ 0.66
SEC13-217ENST00000482647 GPATCH2Q9NW75 528 aa19.16■□□□□ 0.66
SEC13-217ENST00000482647 GIN1Q9NXP7 522 aa19.16■□□□□ 0.66
SEC13-217ENST00000482647 B4GALT7Q9UBV7 327 aa19.16■□□□□ 0.66
SEC13-217ENST00000482647 OSGIN2Q9Y236 505 aa19.16■□□□□ 0.66
SEC13-217ENST00000482647 FAM234BA2RU67 622 aa19.15■□□□□ 0.66
SEC13-217ENST00000482647 ICOSLGO75144 302 aa19.15■□□□□ 0.66
SEC13-217ENST00000482647 ACP2P11117 423 aa19.15■□□□□ 0.66
SEC13-217ENST00000482647 UQCRC2P22695 453 aa19.15■□□□□ 0.66
SEC13-217ENST00000482647 MDH1P40925 334 aaKnown RBP19.15■□□□□ 0.66
SEC13-217ENST00000482647 RFX3P48380 749 aa19.15■□□□□ 0.66
SEC13-217ENST00000482647 MRPL19P49406 292 aaKnown RBP19.15■□□□□ 0.66
SEC13-217ENST00000482647 POLR2JP52435 117 aaKnown RBP19.15■□□□□ 0.66
SEC13-217ENST00000482647 IRX1P78414 480 aaPredicted RBP19.15■□□□□ 0.66
SEC13-217ENST00000482647 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.15■□□□□ 0.66
SEC13-217ENST00000482647 EXOSC6Q5RKV6 272 aaKnown RBP19.15■□□□□ 0.66
SEC13-217ENST00000482647 CDC73Q6P1J9 531 aa19.15■□□□□ 0.66
SEC13-217ENST00000482647 C6orf120Q7Z4R8 191 aa19.15■□□□□ 0.66
SEC13-217ENST00000482647 COX18Q8N8Q8 333 aa19.15■□□□□ 0.66
SEC13-217ENST00000482647 OR5AK3PQ8NH89 298 aa19.15■□□□□ 0.66
SEC13-217ENST00000482647 GOT1L1Q8NHS2 421 aaPredicted RBP19.15■□□□□ 0.66
SEC13-217ENST00000482647 RFWD2Q8NHY2 731 aa19.15■□□□□ 0.66
SEC13-217ENST00000482647 ADAMTS15Q8TE58 950 aa19.15■□□□□ 0.66
SEC13-217ENST00000482647 RMND5BQ96G75 393 aaPredicted RBP19.15■□□□□ 0.66
SEC13-217ENST00000482647 TMEM41AQ96HV5 264 aa19.15■□□□□ 0.66
SEC13-217ENST00000482647 PANX1Q96RD7 426 aa19.15■□□□□ 0.66
SEC13-217ENST00000482647 BTBD2Q9BX70 525 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms