RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 CCDC115Q96NT0 180 aa18.68■□□□□ 0.58
CTSA-206ENST00000480961 ZNF317Q96PQ6 595 aaPredicted RBP18.68■□□□□ 0.58
CTSA-206ENST00000480961 FLRT3Q9NZU0 649 aa18.68■□□□□ 0.58
CTSA-206ENST00000480961 CCDC167Q9P0B6 97 aa18.68■□□□□ 0.58
CTSA-206ENST00000480961 BTNL2Q9UIR0 455 aa18.68■□□□□ 0.58
CTSA-206ENST00000480961 VPS4AQ9UN37 437 aa18.68■□□□□ 0.58
CTSA-206ENST00000480961 NPIPA1Q9UND3 350 aa18.68■□□□□ 0.58
CTSA-206ENST00000480961 KCNE3Q9Y6H6 103 aa18.68■□□□□ 0.58
CTSA-206ENST00000480961 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.68■□□□□ 0.58
CTSA-206ENST00000480961 NKX2-2O95096 273 aa18.67■□□□□ 0.58
CTSA-206ENST00000480961 CYP4B1P13584 511 aa18.67■□□□□ 0.58
CTSA-206ENST00000480961 ZNF24P17028 368 aa18.67■□□□□ 0.58
CTSA-206ENST00000480961 GNLYP22749 145 aa18.67■□□□□ 0.58
CTSA-206ENST00000480961 CASP3P42574 277 aa18.67■□□□□ 0.58
CTSA-206ENST00000480961 UQCRFS1P47985 274 aa18.67■□□□□ 0.58
CTSA-206ENST00000480961 PRIM2P49643 509 aa18.67■□□□□ 0.58
CTSA-206ENST00000480961 ARFIP2P53365 341 aa18.67■□□□□ 0.58
CTSA-206ENST00000480961 PPIAP62937 165 aaKnown RBP18.67■□□□□ 0.58
CTSA-206ENST00000480961 MRPS22P82650 360 aaKnown RBP18.67■□□□□ 0.58
CTSA-206ENST00000480961 VPS26BQ4G0F5 336 aa18.67■□□□□ 0.58
CTSA-206ENST00000480961 CYP27C1Q4G0S4 372 aa18.67■□□□□ 0.58
CTSA-206ENST00000480961 AGKQ53H12 422 aa18.67■□□□□ 0.58
CTSA-206ENST00000480961 DNAJC14Q6Y2X3 702 aaPredicted RBP18.67■□□□□ 0.58
CTSA-206ENST00000480961 ZNF621Q6ZSS3 439 aa18.67■□□□□ 0.58
CTSA-206ENST00000480961 ZFP62Q8NB50 900 aaPredicted RBP18.67■□□□□ 0.58
CTSA-206ENST00000480961 HOXB13Q92826 284 aaPredicted RBP18.67■□□□□ 0.58
CTSA-206ENST00000480961 CDS1Q92903 461 aa18.67■□□□□ 0.58
CTSA-206ENST00000480961 SLC35A4Q96G79 324 aa18.67■□□□□ 0.58
CTSA-206ENST00000480961 PANX1Q96RD7 426 aa18.67■□□□□ 0.58
CTSA-206ENST00000480961 SLX1AQ9BQ83 275 aa18.67■□□□□ 0.58
CTSA-206ENST00000480961 SIKE1Q9BRV8 207 aa18.67■□□□□ 0.58
CTSA-206ENST00000480961 DOHHQ9BU89 302 aa18.67■□□□□ 0.58
CTSA-206ENST00000480961 ACTRT3Q9BYD9 372 aa18.67■□□□□ 0.58
CTSA-206ENST00000480961 METTL7AQ9H8H3 244 aa18.67■□□□□ 0.58
CTSA-206ENST00000480961 FAF1Q9UNN5 650 aaPredicted RBP18.67■□□□□ 0.58
CTSA-206ENST00000480961 CCDC154A6NI56 674 aa18.66■□□□□ 0.58
CTSA-206ENST00000480961 OR6C70A6NIJ9 312 aa18.66■□□□□ 0.58
CTSA-206ENST00000480961 NR5A2O00482 541 aa18.66■□□□□ 0.58
CTSA-206ENST00000480961 ZNHIT1O43257 154 aa18.66■□□□□ 0.58
CTSA-206ENST00000480961 HS6ST1O60243 411 aa18.66■□□□□ 0.58
CTSA-206ENST00000480961 UQCRC2P22695 453 aa18.66■□□□□ 0.58
CTSA-206ENST00000480961 SEC24CP53992 1094 aa18.66■□□□□ 0.58
CTSA-206ENST00000480961 FOXO1Q12778 655 aa18.66■□□□□ 0.58
CTSA-206ENST00000480961 SQLEQ14534 574 aa18.66■□□□□ 0.58
CTSA-206ENST00000480961 DECR1Q16698 335 aa18.66■□□□□ 0.58
CTSA-206ENST00000480961 EXOSC6Q5RKV6 272 aaKnown RBP18.66■□□□□ 0.58
CTSA-206ENST00000480961 CCNJQ5T5M9 372 aa18.66■□□□□ 0.58
CTSA-206ENST00000480961 FIGNL1Q6PIW4 674 aa18.66■□□□□ 0.58
CTSA-206ENST00000480961 ATCAYQ86WG3 371 aa18.66■□□□□ 0.58
CTSA-206ENST00000480961 SIAH3Q8IW03 269 aa18.66■□□□□ 0.58
CTSA-206ENST00000480961 COX18Q8N8Q8 333 aa18.66■□□□□ 0.58
CTSA-206ENST00000480961 OR5D16Q8NGK9 328 aa18.66■□□□□ 0.58
CTSA-206ENST00000480961 STON2Q8WXE9 905 aa18.66■□□□□ 0.58
CTSA-206ENST00000480961 MOAP1Q96BY2 351 aa18.66■□□□□ 0.58
CTSA-206ENST00000480961 TTTY12Q9BZ98 90 aa18.66■□□□□ 0.58
CTSA-206ENST00000480961 DEFB127Q9H1M4 99 aa18.66■□□□□ 0.58
CTSA-206ENST00000480961 SERHL2Q9H4I8 314 aa18.66■□□□□ 0.58
CTSA-206ENST00000480961 GALNT9Q9HCQ5 603 aa18.66■□□□□ 0.58
CTSA-206ENST00000480961 SERHLQ9NQF3 203 aa18.66■□□□□ 0.58
CTSA-206ENST00000480961 SLC6A13Q9NSD5 602 aa18.66■□□□□ 0.58
CTSA-206ENST00000480961 FBXO34Q9NWN3 711 aa18.66■□□□□ 0.58
CTSA-206ENST00000480961 GCN1Q92616 2671 aaKnown RBP18.66■□□□□ 0.58
CTSA-206ENST00000480961 RELNP78509 3460 aa18.65■□□□□ 0.58
CTSA-206ENST00000480961 RFXANKO14593 260 aa18.65■□□□□ 0.58
CTSA-206ENST00000480961 TFECO14948 347 aaPredicted RBP18.65■□□□□ 0.58
CTSA-206ENST00000480961 PDE9AO76083 593 aa18.65■□□□□ 0.58
CTSA-206ENST00000480961 CBX6O95503 412 aa18.65■□□□□ 0.58
CTSA-206ENST00000480961 IL33O95760 270 aa18.65■□□□□ 0.58
CTSA-206ENST00000480961 CHI3L1P36222 383 aaPredicted RBP18.65■□□□□ 0.58
CTSA-206ENST00000480961 MRPL19P49406 292 aaKnown RBP18.65■□□□□ 0.58
CTSA-206ENST00000480961 MAN2A2P49641 1150 aa18.65■□□□□ 0.58
CTSA-206ENST00000480961 ATP4BP51164 291 aa18.65■□□□□ 0.58
CTSA-206ENST00000480961 TDGF1P3P51864 188 aa18.65■□□□□ 0.58
CTSA-206ENST00000480961 KCNK10P57789 538 aa18.65■□□□□ 0.58
CTSA-206ENST00000480961 RPP38P78345 283 aaKnown RBP18.65■□□□□ 0.58
CTSA-206ENST00000480961 CDC73Q6P1J9 531 aa18.65■□□□□ 0.58
CTSA-206ENST00000480961 ZCCHC12Q6PEW1 402 aa18.65■□□□□ 0.58
CTSA-206ENST00000480961 SLC2A7Q6PXP3 512 aa18.65■□□□□ 0.58
CTSA-206ENST00000480961 GK5Q6ZS86 529 aa18.65■□□□□ 0.58
CTSA-206ENST00000480961 ZAR1Q86SH2 424 aa18.65■□□□□ 0.58
CTSA-206ENST00000480961 POGLUT1Q8NBL1 392 aa18.65■□□□□ 0.58
CTSA-206ENST00000480961 GALNT11Q8NCW6 608 aa18.65■□□□□ 0.58
CTSA-206ENST00000480961 GOT1L1Q8NHS2 421 aaPredicted RBP18.65■□□□□ 0.58
CTSA-206ENST00000480961 ADAMTS15Q8TE58 950 aa18.65■□□□□ 0.58
CTSA-206ENST00000480961 TMCO6Q96DC7 493 aa18.65■□□□□ 0.58
CTSA-206ENST00000480961 SLC35G5Q96KT7 338 aa18.65■□□□□ 0.58
CTSA-206ENST00000480961 SECISBP2Q96T21 854 aaKnown RBP18.65■□□□□ 0.58
CTSA-206ENST00000480961 SLC35A5Q9BS91 424 aa18.65■□□□□ 0.58
CTSA-206ENST00000480961 ANGPTL4Q9BY76 406 aa18.65■□□□□ 0.58
CTSA-206ENST00000480961 ZNF385DQ9H6B1 395 aa18.65■□□□□ 0.58
CTSA-206ENST00000480961 RYDENQ9NUL5 291 aaKnown RBP18.65■□□□□ 0.58
CTSA-206ENST00000480961 KLRF1Q9NZS2 232 aa18.65■□□□□ 0.58
CTSA-206ENST00000480961 TRIM33Q9UPN9 1127 aa18.65■□□□□ 0.58
CTSA-206ENST00000480961 HELZ2Q9BYK8 2649 aaKnown RBP18.65■□□□□ 0.58
CTSA-206ENST00000480961 TENM4Q6N022 2769 aa18.64■□□□□ 0.58
CTSA-206ENST00000480961 PRAMEF25A6NGN4 478 aa18.64■□□□□ 0.57
CTSA-206ENST00000480961 LRRC3CA6NJW4 275 aa18.64■□□□□ 0.57
CTSA-206ENST00000480961 TTC36A6NLP5 189 aa18.64■□□□□ 0.57
CTSA-206ENST00000480961 C17orf51A8MQB3 221 aa18.64■□□□□ 0.57
CTSA-206ENST00000480961 ICOSLGO75144 302 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms