RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 ANP32DO95626 131 aa8.34□□□□□ -1.07
VCP-206ENST00000480327 C1QCP02747 245 aa8.34□□□□□ -1.07
VCP-206ENST00000480327 SNRPB2P08579 225 aaKnown RBP8.34□□□□□ -1.07
VCP-206ENST00000480327 HTR1EP28566 365 aa8.34□□□□□ -1.07
VCP-206ENST00000480327 CD96P40200 585 aa8.34□□□□□ -1.07
VCP-206ENST00000480327 KRTAP10-9P60411 292 aa8.34□□□□□ -1.07
VCP-206ENST00000480327 RPS26P62854 115 aaKnown RBP8.34□□□□□ -1.07
VCP-206ENST00000480327 PRR5P85299 388 aa8.34□□□□□ -1.07
VCP-206ENST00000480327 KLF10Q13118 480 aa8.34□□□□□ -1.07
VCP-206ENST00000480327 TUBA3CQ13748 450 aa8.34□□□□□ -1.07
VCP-206ENST00000480327 RCAN2Q14206 197 aa8.34□□□□□ -1.07
VCP-206ENST00000480327 LASP1Q14847 261 aaKnown RBP8.34□□□□□ -1.07
VCP-206ENST00000480327 INAQ16352 499 aa8.34□□□□□ -1.07
VCP-206ENST00000480327 MAPKAPK3Q16644 382 aa8.34□□□□□ -1.07
VCP-206ENST00000480327 ZNF630Q2M218 657 aaPredicted RBP8.34□□□□□ -1.07
VCP-206ENST00000480327 GTDC1Q4AE62 458 aa8.34□□□□□ -1.07
VCP-206ENST00000480327 PIGGQ5H8A4 983 aa8.34□□□□□ -1.07
VCP-206ENST00000480327 C6orf10Q5SRN2 563 aa8.34□□□□□ -1.07
VCP-206ENST00000480327 SPINK14Q6IE38 97 aa8.34□□□□□ -1.07
VCP-206ENST00000480327 TUBA3EQ6PEY2 450 aa8.34□□□□□ -1.07
VCP-206ENST00000480327 NPSR1Q6W5P4 371 aa8.34□□□□□ -1.07
VCP-206ENST00000480327 BNC2Q6ZN30 1099 aaPredicted RBP8.34□□□□□ -1.07
VCP-206ENST00000480327 ZNF621Q6ZSS3 439 aa8.34□□□□□ -1.07
VCP-206ENST00000480327 NCCRP1Q6ZVX7 275 aaPredicted RBP8.34□□□□□ -1.07
VCP-206ENST00000480327 PIGWQ7Z7B1 504 aa8.34□□□□□ -1.07
VCP-206ENST00000480327 MRGPRGQ86SM5 289 aa8.34□□□□□ -1.07
VCP-206ENST00000480327 MTDHQ86UE4 582 aaKnown RBP8.34□□□□□ -1.07
VCP-206ENST00000480327 SLC44A2Q8IWA5 706 aaPredicted RBP8.34□□□□□ -1.07
VCP-206ENST00000480327 CPSF7Q8N684 471 aaKnown RBP8.34□□□□□ -1.07
VCP-206ENST00000480327 ZNF441Q8N8Z8 693 aa8.34□□□□□ -1.07
VCP-206ENST00000480327 OR4N2Q8NGD1 307 aa8.34□□□□□ -1.07
VCP-206ENST00000480327 OR5M3Q8NGP4 307 aa8.34□□□□□ -1.07
VCP-206ENST00000480327 NUBPLQ8TB37 319 aa8.34□□□□□ -1.07
VCP-206ENST00000480327 ASB15Q8WXK1 588 aa8.34□□□□□ -1.07
VCP-206ENST00000480327 SLC9A6Q92581 669 aa8.34□□□□□ -1.07
VCP-206ENST00000480327 ERP27Q96DN0 273 aa8.34□□□□□ -1.07
VCP-206ENST00000480327 SPDL1Q96EA4 605 aa8.34□□□□□ -1.07
VCP-206ENST00000480327 VSTM2LQ96N03 204 aa8.34□□□□□ -1.07
VCP-206ENST00000480327 CCDC115Q96NT0 180 aa8.34□□□□□ -1.07
VCP-206ENST00000480327 UTP23Q9BRU9 249 aaKnown RBP8.34□□□□□ -1.07
VCP-206ENST00000480327 RNF32Q9H0A6 362 aa8.34□□□□□ -1.07
VCP-206ENST00000480327 RMND5AQ9H871 391 aa8.34□□□□□ -1.07
VCP-206ENST00000480327 SERHLQ9NQF3 203 aa8.34□□□□□ -1.07
VCP-206ENST00000480327 SLC6A13Q9NSD5 602 aa8.34□□□□□ -1.07
VCP-206ENST00000480327 BTNL2Q9UIR0 455 aa8.34□□□□□ -1.07
VCP-206ENST00000480327 CFL2Q9Y281 166 aa8.34□□□□□ -1.07
VCP-206ENST00000480327 YARS2Q9Y2Z4 477 aaKnown RBP8.34□□□□□ -1.07
VCP-206ENST00000480327 MTORP42345 2549 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 MAP1AP78559 2803 aaPredicted RBP8.33□□□□□ -1.08
VCP-206ENST00000480327 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 LOC100653049A0A140TA62 436 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 GXYLT2A0PJZ3 443 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 ASPDHA6ND91 283 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 OR5H15A6NDH6 313 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 A8MVJ9 347 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 RFXANKO14593 260 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 ZNHIT1O43257 154 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 CCDC22O60826 627 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 SHOX2O60902 331 aaPredicted RBP8.33□□□□□ -1.08
VCP-206ENST00000480327 KRT34O76011 436 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 PSMG1O95456 288 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 HMGN2P05204 90 aaKnown RBP8.33□□□□□ -1.08
VCP-206ENST00000480327 ACP2P11117 423 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 UQCRC2P22695 453 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 GABRA3P34903 492 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 CHI3L1P36222 383 aaPredicted RBP8.33□□□□□ -1.08
VCP-206ENST00000480327 PPICP45877 212 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 RFX3P48380 749 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 IRX1P78414 480 aaPredicted RBP8.33□□□□□ -1.08
VCP-206ENST00000480327 GAB1Q13480 694 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 OR1C1Q15619 314 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 ZNHIT3Q15649 155 aaPredicted RBP8.33□□□□□ -1.08
VCP-206ENST00000480327 C3AR1Q16581 482 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 PAGE3Q5JUK9 113 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 DESI1Q6ICB0 168 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 MFSD12Q6NUT3 480 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 ANGPTL8Q6UXH0 198 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 C6orf120Q7Z4R8 191 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 GALNT10Q86SR1 603 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 CHERPQ8IWX8 916 aaKnown RBP8.33□□□□□ -1.08
VCP-206ENST00000480327 TAGAPQ8N103 731 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 LGI4Q8N135 537 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 ZNF808Q8N4W9 903 aaPredicted RBP8.33□□□□□ -1.08
VCP-206ENST00000480327 OR56A1Q8NGH5 318 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 PSMA8Q8TAA3 256 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 SLC22A8Q8TCC7 542 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 PNPT1Q8TCS8 783 aaKnown RBP8.33□□□□□ -1.08
VCP-206ENST00000480327 GPR151Q8TDV0 419 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 PIK3R3Q92569 461 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 TP53INP1Q96A56 240 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 GIMAP5Q96F15 307 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 AURKBQ96GD4 344 aaPredicted RBP8.33□□□□□ -1.08
VCP-206ENST00000480327 ITCHQ96J02 903 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 LCORQ96JN0 433 aaPredicted RBP8.33□□□□□ -1.08
VCP-206ENST00000480327 MS4A4EQ96PG1 132 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 SIGLEC12Q96PQ1 595 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 SLC35A5Q9BS91 424 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 HES7Q9BYE0 225 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 IL1RL2Q9HB29 575 aa8.33□□□□□ -1.08
VCP-206ENST00000480327 NEUROD4Q9HD90 331 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms