RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 GATA5Q9BWX5 397 aaPredicted RBP13.72□□□□□ -0.21
PRKN-207ENST00000479615 ACBD3Q9H3P7 528 aa13.72□□□□□ -0.21
PRKN-207ENST00000479615 ANKZF1Q9H8Y5 726 aa13.72□□□□□ -0.21
PRKN-207ENST00000479615 GALNT9Q9HCQ5 603 aa13.72□□□□□ -0.21
PRKN-207ENST00000479615 LGALS13Q9UHV8 139 aa13.72□□□□□ -0.21
PRKN-207ENST00000479615 CAMK2AQ9UQM7 478 aa13.72□□□□□ -0.21
PRKN-207ENST00000479615 LRBAP50851 2863 aa13.72□□□□□ -0.21
PRKN-207ENST00000479615 EML6Q6ZMW3 1958 aa13.71□□□□□ -0.21
PRKN-207ENST00000479615 MBD3L4A6NDZ8 208 aaPredicted RBP13.71□□□□□ -0.21
PRKN-207ENST00000479615 MBD3L3A6NE82 208 aaPredicted RBP13.71□□□□□ -0.21
PRKN-207ENST00000479615 MBD3L5A6NJ08 208 aaPredicted RBP13.71□□□□□ -0.21
PRKN-207ENST00000479615 LINC01387J3KSC0 135 aa13.71□□□□□ -0.21
PRKN-207ENST00000479615 UPK1AO00322 258 aa13.71□□□□□ -0.21
PRKN-207ENST00000479615 PSMG1O95456 288 aa13.71□□□□□ -0.21
PRKN-207ENST00000479615 IL18BPO95998 194 aa13.71□□□□□ -0.21
PRKN-207ENST00000479615 CHMP24386 653 aa13.71□□□□□ -0.21
PRKN-207ENST00000479615 MAPK1P28482 360 aa13.71□□□□□ -0.21
PRKN-207ENST00000479615 OPRM1P35372 400 aa13.71□□□□□ -0.21
PRKN-207ENST00000479615 RPL3P39023 403 aaKnown RBP13.71□□□□□ -0.21
PRKN-207ENST00000479615 ASMTP46597 345 aa13.71□□□□□ -0.21
PRKN-207ENST00000479615 ASCL1P50553 236 aa13.71□□□□□ -0.21
PRKN-207ENST00000479615 CORO7P57737 925 aa13.71□□□□□ -0.21
PRKN-207ENST00000479615 PSG6Q00889 435 aa13.71□□□□□ -0.21
PRKN-207ENST00000479615 ZNF155Q12901 538 aaPredicted RBP13.71□□□□□ -0.21
PRKN-207ENST00000479615 PCLAFQ15004 111 aa13.71□□□□□ -0.21
PRKN-207ENST00000479615 BCL2A1Q16548 175 aa13.71□□□□□ -0.21
PRKN-207ENST00000479615 WDR93Q6P2C0 686 aa13.71□□□□□ -0.21
PRKN-207ENST00000479615 ARSKQ6UWY0 536 aa13.71□□□□□ -0.21
PRKN-207ENST00000479615 LRIG3Q6UXM1 1119 aa13.71□□□□□ -0.21
PRKN-207ENST00000479615 R3HCC1LQ7Z5L2 792 aaKnown RBP13.71□□□□□ -0.21
PRKN-207ENST00000479615 IFNEQ86WN2 208 aa13.71□□□□□ -0.21
PRKN-207ENST00000479615 LIX1LQ8IVB5 337 aa13.71□□□□□ -0.21
PRKN-207ENST00000479615 MBD3L2Q8NHZ7 208 aaPredicted RBP13.71□□□□□ -0.21
PRKN-207ENST00000479615 ZBED6CLQ96FA7 236 aaPredicted RBP13.71□□□□□ -0.21
PRKN-207ENST00000479615 FCRL1Q96LA6 429 aa13.71□□□□□ -0.21
PRKN-207ENST00000479615 UCN2Q96RP3 112 aa13.71□□□□□ -0.21
PRKN-207ENST00000479615 TM9SF2Q99805 663 aa13.71□□□□□ -0.21
PRKN-207ENST00000479615 GLIPR2Q9H4G4 154 aa13.71□□□□□ -0.21
PRKN-207ENST00000479615 SERHLQ9NQF3 203 aa13.71□□□□□ -0.21
PRKN-207ENST00000479615 TAS2R10Q9NYW0 307 aa13.71□□□□□ -0.21
PRKN-207ENST00000479615 CBLCQ9ULV8 474 aa13.71□□□□□ -0.21
PRKN-207ENST00000479615 MAPRE3Q9UPY8 281 aa13.71□□□□□ -0.21
PRKN-207ENST00000479615 SLC6A5Q9Y345 797 aa13.71□□□□□ -0.21
PRKN-207ENST00000479615 NINQ8N4C6 2090 aa13.71□□□□□ -0.21
PRKN-207ENST00000479615 TMEM114B3SHH9 223 aa13.7□□□□□ -0.22
PRKN-207ENST00000479615 SOX30O94993 753 aa13.7□□□□□ -0.22
PRKN-207ENST00000479615 CTSSP25774 331 aa13.7□□□□□ -0.22
PRKN-207ENST00000479615 MC3RP41968 323 aa13.7□□□□□ -0.22
PRKN-207ENST00000479615 DSCR4P56555 118 aaPredicted RBP13.7□□□□□ -0.22
PRKN-207ENST00000479615 MYBPHQ13203 477 aa13.7□□□□□ -0.22
PRKN-207ENST00000479615 GANABQ14697 944 aaKnown RBP13.7□□□□□ -0.22
PRKN-207ENST00000479615 KANK2Q63ZY3 851 aa13.7□□□□□ -0.22
PRKN-207ENST00000479615 CLEC6AQ6EIG7 209 aa13.7□□□□□ -0.22
PRKN-207ENST00000479615 TMEM107Q6UX40 140 aa13.7□□□□□ -0.22
PRKN-207ENST00000479615 NPSR1Q6W5P4 371 aa13.7□□□□□ -0.22
PRKN-207ENST00000479615 Q6ZSR9 355 aa13.7□□□□□ -0.22
PRKN-207ENST00000479615 SEM1Q6ZVN7 128 aa13.7□□□□□ -0.22
PRKN-207ENST00000479615 YRDCQ86U90 279 aaKnown RBP13.7□□□□□ -0.22
PRKN-207ENST00000479615 KIF18BQ86Y91 864 aa13.7□□□□□ -0.22
PRKN-207ENST00000479615 NATD1Q8N6N6 113 aa13.7□□□□□ -0.22
PRKN-207ENST00000479615 GOT1L1Q8NHS2 421 aaPredicted RBP13.7□□□□□ -0.22
PRKN-207ENST00000479615 RNASE6Q93091 150 aaKnown RBP13.7□□□□□ -0.22
PRKN-207ENST00000479615 PPCDCQ96CD2 204 aa13.7□□□□□ -0.22
PRKN-207ENST00000479615 PPP3R2Q96LZ3 170 aa13.7□□□□□ -0.22
PRKN-207ENST00000479615 TRIB1Q96RU8 372 aa13.7□□□□□ -0.22
PRKN-207ENST00000479615 LMF2Q9BU23 707 aaKnown RBP13.7□□□□□ -0.22
PRKN-207ENST00000479615 REEP4Q9H6H4 257 aa13.7□□□□□ -0.22
PRKN-207ENST00000479615 PTGES2Q9H7Z7 377 aa13.7□□□□□ -0.22
PRKN-207ENST00000479615 ANKRA2Q9H9E1 313 aa13.7□□□□□ -0.22
PRKN-207ENST00000479615 ACSS1Q9NUB1 689 aaPredicted RBP13.7□□□□□ -0.22
PRKN-207ENST00000479615 FAM120CQ9NX05 1096 aaKnown RBP13.7□□□□□ -0.22
PRKN-207ENST00000479615 EDARQ9UNE0 448 aa13.7□□□□□ -0.22
PRKN-207ENST00000479615 TRAF6Q9Y4K3 522 aa13.7□□□□□ -0.22
PRKN-207ENST00000479615 DNAJC15Q9Y5T4 150 aa13.7□□□□□ -0.22
PRKN-207ENST00000479615 ADGRG4Q8IZF6 3080 aa13.7□□□□□ -0.22
PRKN-207ENST00000479615 PDPK1O15530 556 aa13.69□□□□□ -0.22
PRKN-207ENST00000479615 ZWINTO95229 277 aa13.69□□□□□ -0.22
PRKN-207ENST00000479615 KCNH1O95259 989 aa13.69□□□□□ -0.22
PRKN-207ENST00000479615 PRPS2P11908 318 aa13.69□□□□□ -0.22
PRKN-207ENST00000479615 BMP5P22003 454 aa13.69□□□□□ -0.22
PRKN-207ENST00000479615 GRK2P25098 689 aa13.69□□□□□ -0.22
PRKN-207ENST00000479615 EVI2BP34910 448 aa13.69□□□□□ -0.22
PRKN-207ENST00000479615 GPC1P35052 558 aa13.69□□□□□ -0.22
PRKN-207ENST00000479615 GFRA1P56159 465 aa13.69□□□□□ -0.22
PRKN-207ENST00000479615 EEFSECP57772 596 aaKnown RBP13.69□□□□□ -0.22
PRKN-207ENST00000479615 VSNL1P62760 191 aa13.69□□□□□ -0.22
PRKN-207ENST00000479615 GAB1Q13480 694 aa13.69□□□□□ -0.22
PRKN-207ENST00000479615 FAM219BQ5XKK7 198 aa13.69□□□□□ -0.22
PRKN-207ENST00000479615 DESI1Q6ICB0 168 aa13.69□□□□□ -0.22
PRKN-207ENST00000479615 ZCCHC12Q6PEW1 402 aa13.69□□□□□ -0.22
PRKN-207ENST00000479615 TRIM42Q8IWZ5 723 aa13.69□□□□□ -0.22
PRKN-207ENST00000479615 TNIP2Q8NFZ5 429 aa13.69□□□□□ -0.22
PRKN-207ENST00000479615 OR4K17Q8NGC6 315 aa13.69□□□□□ -0.22
PRKN-207ENST00000479615 WNT2BQ93097 391 aa13.69□□□□□ -0.22
PRKN-207ENST00000479615 CAVIN3Q969G5 261 aa13.69□□□□□ -0.22
PRKN-207ENST00000479615 FAM111AQ96PZ2 611 aa13.69□□□□□ -0.22
PRKN-207ENST00000479615 TMEM109Q9BVC6 243 aa13.69□□□□□ -0.22
PRKN-207ENST00000479615 TNFRSF12AQ9NP84 129 aa13.69□□□□□ -0.22
PRKN-207ENST00000479615 PPP4R1LQ9P1A2 415 aa13.69□□□□□ -0.22
PRKN-207ENST00000479615 DKKL1Q9UK85 242 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms