RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 KRT72Q14CN4 511 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 MAPKAPK3Q16644 382 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 ZNF630Q2M218 657 aaPredicted RBP8.21□□□□□ -1.1
DDX56-211ENST00000479602 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.21□□□□□ -1.1
DDX56-211ENST00000479602 TRMT5Q32P41 509 aaKnown RBP8.21□□□□□ -1.1
DDX56-211ENST00000479602 SPATS1Q496A3 300 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 CT45A2Q5DJT8 189 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 PIGGQ5H8A4 983 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 TBCELQ5QJ74 424 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 ACER2Q5QJU3 275 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 MFSD12Q6NUT3 480 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 CDC73Q6P1J9 531 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 PAOXQ6QHF9 649 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 OPN5Q6U736 354 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 FAM180AQ6UWF9 173 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 Q6ZPB1 254 aaPredicted RBP8.21□□□□□ -1.1
DDX56-211ENST00000479602 DGAT2L6Q6ZPD8 337 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 ARPINQ7Z6K5 226 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 FJX1Q86VR8 437 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 RPS19BP1Q86WX3 136 aaKnown RBP8.21□□□□□ -1.1
DDX56-211ENST00000479602 OR4N5Q8IXE1 308 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 PRSS58Q8IYP2 241 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 CCDC116Q8IYX3 515 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 ZNF295-AS1Q8N0V1 137 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 TAGAPQ8N103 731 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 SIRT6Q8N6T7 355 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 MDS2Q8NDY4 140 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 CHDHQ8NE62 594 aaPredicted RBP8.21□□□□□ -1.1
DDX56-211ENST00000479602 OR9I1Q8NGQ6 314 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 SLC22A8Q8TCC7 542 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 THAP3Q8WTV1 239 aaPredicted RBP8.21□□□□□ -1.1
DDX56-211ENST00000479602 UCN3Q969E3 161 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 CIDECQ96AQ7 238 aaPredicted RBP8.21□□□□□ -1.1
DDX56-211ENST00000479602 CMTM5Q96DZ9 223 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 LCORQ96JN0 433 aaPredicted RBP8.21□□□□□ -1.1
DDX56-211ENST00000479602 PPP1R36Q96LQ0 422 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 FRMD6Q96NE9 622 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 CCDC106Q9BWC9 280 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 DEFB126Q9BYW3 111 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 OR8D2Q9GZM6 311 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 CXorf36Q9H7Y0 433 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 PNO1Q9NRX1 252 aaKnown RBP8.21□□□□□ -1.1
DDX56-211ENST00000479602 PCDHGB4Q9UN71 923 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 ERVK-11Q9UQG0 969 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 PCDHGB3Q9Y5G1 929 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 NUP214P35658 2090 aaPredicted RBP8.21□□□□□ -1.1
DDX56-211ENST00000479602 NCOA6Q14686 2063 aaPredicted RBP8.2□□□□□ -1.1
DDX56-211ENST00000479602 ITPR3Q14573 2671 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 ZNF469Q96JG9 3925 aaPredicted RBP8.2□□□□□ -1.1
DDX56-211ENST00000479602 TRBV11-1A0A0K0K1C0 115 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 C2orf92A0A1B0GVN3 265 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 OR2W5A6NFC9 320 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 CCDC154A6NI56 674 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 OR6C70A6NIJ9 312 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 FXYD1O00168 92 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 NDUFAB1O14561 156 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 RFXANKO14593 260 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 AKAP10O43572 662 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 LRATO95237 230 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 KRT75O95678 551 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 C6orf47O95873 294 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 GPX2P18283 190 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 ELAVL4P26378 380 aaKnown RBP8.2□□□□□ -1.1
DDX56-211ENST00000479602 CCT3P49368 545 aaKnown RBP8.2□□□□□ -1.1
DDX56-211ENST00000479602 HLCSP50747 726 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 CDK9P50750 372 aaKnown RBP8.2□□□□□ -1.1
DDX56-211ENST00000479602 MNAT1P51948 309 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 GYS2P54840 703 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 PSMD4P55036 377 aaKnown RBP8.2□□□□□ -1.1
DDX56-211ENST00000479602 NRG3P56975 720 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 MRPS22P82650 360 aaKnown RBP8.2□□□□□ -1.1
DDX56-211ENST00000479602 SNTA1Q13424 505 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 ZNF267Q14586 743 aaPredicted RBP8.2□□□□□ -1.1
DDX56-211ENST00000479602 ZNHIT3Q15649 155 aaPredicted RBP8.2□□□□□ -1.1
DDX56-211ENST00000479602 NTRK2Q16620 822 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 TIGD2Q4W5G0 525 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 TRMT12Q53H54 448 aaKnown RBP8.2□□□□□ -1.1
DDX56-211ENST00000479602 HEPHL1Q6MZM0 1159 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 C8orf82Q6P1X6 216 aaPredicted RBP8.2□□□□□ -1.1
DDX56-211ENST00000479602 FAM111BQ6SJ93 734 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 LYPD8Q6UX82 237 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 DLEU7Q6UYE1 221 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 BNC2Q6ZN30 1099 aaPredicted RBP8.2□□□□□ -1.1
DDX56-211ENST00000479602 ZNF551Q7Z340 670 aaPredicted RBP8.2□□□□□ -1.1
DDX56-211ENST00000479602 NET1Q7Z628 596 aaPredicted RBP8.2□□□□□ -1.1
DDX56-211ENST00000479602 SIAH3Q8IW03 269 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 HORMAD2Q8N7B1 307 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 PCYOX1LQ8NBM8 494 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 CCDC197Q8NCU1 140 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 OR8J3Q8NGG0 315 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 CDC26Q8NHZ8 85 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 FAM110BQ8TC76 370 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 PAQR8Q8TEZ7 354 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 ZFP90Q8TF47 636 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 GFM2Q969S9 779 aaKnown RBP8.2□□□□□ -1.1
DDX56-211ENST00000479602 SCMH1Q96GD3 660 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 CCDC120Q96HB5 630 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 LRRC37BQ96QE4 947 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 PANX1Q96RD7 426 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 TREX2Q9BQ50 279 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms