RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 SLC35G5Q96KT7 338 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 ZNF583Q96ND8 569 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 KCTD14Q9BQ13 255 aaPredicted RBP6.2□□□□□ -1.42
USP48-208ENST00000479177 PELOQ9BRX2 385 aaKnown RBP6.2□□□□□ -1.42
USP48-208ENST00000479177 ASPSCR1Q9BZE9 553 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 VN1R1Q9GZP7 353 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 RAD21L1Q9H4I0 556 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 SERHL2Q9H4I8 314 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 MAT2BQ9NZL9 334 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 NTMQ9P121 344 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 TNFRSF10DQ9UBN6 386 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 USP22Q9UPT9 525 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 SATB2Q9UPW6 733 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 CORO2BQ9UQ03 480 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 SNX8Q9Y5X2 465 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 A0A087WV62 115 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 TEX51A0A1B0GUA7 166 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 TCRBV16S1A1N1A0A5B0 115 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 SYNDIG1LA6NDD5 238 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 C9J4A7 227 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 UPK1AO00322 258 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 ACOT8O14734 319 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 ARPC2O15144 300 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 EMC8O43402 210 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 OR10H2O60403 315 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 PLOD3O60568 738 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 BCAS2O75934 225 aaPredicted RBP6.19□□□□□ -1.42
USP48-208ENST00000479177 STK17BO94768 372 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 KRT75O95678 551 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 CYC1P08574 325 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 CT62P0C5K7 136 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 ETFAP13804 333 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 TCN1P20061 433 aaPredicted RBP6.19□□□□□ -1.42
USP48-208ENST00000479177 ATP6V1B2P21281 511 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 AGXTP21549 392 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 NT5EP21589 574 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 HTR1EP28566 365 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 GALNSP34059 522 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 PCGF2P35227 344 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 MSX2P35548 267 aaPredicted RBP6.19□□□□□ -1.42
USP48-208ENST00000479177 CHI3L1P36222 383 aaPredicted RBP6.19□□□□□ -1.42
USP48-208ENST00000479177 MAGEA8P43361 318 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 CCT3P49368 545 aaKnown RBP6.19□□□□□ -1.42
USP48-208ENST00000479177 KHKP50053 298 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 FOXL2P58012 376 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 ELF3P78545 371 aaPredicted RBP6.19□□□□□ -1.42
USP48-208ENST00000479177 MRPS35P82673 323 aaKnown RBP6.19□□□□□ -1.42
USP48-208ENST00000479177 PRR5P85299 388 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 MS4A2Q01362 244 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 OCA2Q04671 838 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 STX4Q12846 297 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 TARDBPQ13148 414 aaKnown RBP eCLIP6.19□□□□□ -1.42
USP48-208ENST00000479177 DUSP8Q13202 625 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 TP53BP2Q13625 1128 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 KPNB1Q14974 876 aaKnown RBP6.19□□□□□ -1.42
USP48-208ENST00000479177 ADRM1Q16186 407 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 CYP51A1Q16850 503 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 PRICKLE4Q2TBC4 344 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 MINDY4Q4G0A6 757 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 VWA2Q5GFL6 755 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 GCNT6Q5T4J0 391 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 MFSD4BQ5TF39 518 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 BHLHB9Q6PI77 547 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 ANGPTL8Q6UXH0 198 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 SZRD1Q7Z422 152 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 ZNF605Q86T29 641 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 SERPINA11Q86U17 422 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 RNF130Q86XS8 419 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 PTRH1Q86Y79 214 aaKnown RBP6.19□□□□□ -1.42
USP48-208ENST00000479177 PTOV1Q86YD1 416 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 TMEM151BQ8IW70 566 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 ZZZ3Q8IYH5 903 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 PRSS58Q8IYP2 241 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 MICU2Q8IYU8 434 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 OR2T12Q8NG77 320 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 MIPOL1Q8TD10 442 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 WDR60Q8WVS4 1066 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 ADAMTS14Q8WXS8 1223 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 MR1Q95460 341 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 PPP1R14AQ96A00 147 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 PPWD1Q96BP3 646 aaKnown RBP6.19□□□□□ -1.42
USP48-208ENST00000479177 CTHRC1Q96CG8 243 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 ELP4Q96EB1 424 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 GIMAP5Q96F15 307 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 REXO5Q96IC2 774 aaKnown RBP6.19□□□□□ -1.42
USP48-208ENST00000479177 PTCHD1Q96NR3 888 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 DGAT2Q96PD7 388 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 MS4A4EQ96PG1 132 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 ECSITQ9BQ95 431 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 THUMPD3Q9BV44 507 aaKnown RBP6.19□□□□□ -1.42
USP48-208ENST00000479177 SPATA9Q9BWV2 254 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 ALOXE3Q9BYJ1 711 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 SPRY4Q9C004 299 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 MUC13Q9H3R2 512 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 DENND2DQ9H6A0 471 aaPredicted RBP6.19□□□□□ -1.42
USP48-208ENST00000479177 WDR54Q9H977 334 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 AKIRIN1Q9H9L7 192 aaPredicted RBP6.19□□□□□ -1.42
USP48-208ENST00000479177 CXorf21Q9HAI6 301 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 ZCCHC3Q9NUD5 404 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms