RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 ANGPTL4Q9BY76 406 aa18.8■□□□□ 0.6
VARS-224ENST00000479051 ZFP64Q9NPA5 681 aa18.8■□□□□ 0.6
VARS-224ENST00000479051 KLRF1Q9NZS2 232 aa18.8■□□□□ 0.6
VARS-224ENST00000479051 HELZ2Q9BYK8 2649 aaKnown RBP18.79■□□□□ 0.6
VARS-224ENST00000479051 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.79■□□□□ 0.6
VARS-224ENST00000479051 PRAMEF25A6NGN4 478 aa18.79■□□□□ 0.6
VARS-224ENST00000479051 FAM166BA8MTA8 275 aa18.79■□□□□ 0.6
VARS-224ENST00000479051 TSPAN2O60636 221 aa18.79■□□□□ 0.6
VARS-224ENST00000479051 HMGN2P05204 90 aaKnown RBP18.79■□□□□ 0.6
VARS-224ENST00000479051 IL6P05231 212 aa18.79■□□□□ 0.6
VARS-224ENST00000479051 CASP3P42574 277 aa18.79■□□□□ 0.6
VARS-224ENST00000479051 WNT3P56703 355 aa18.79■□□□□ 0.6
VARS-224ENST00000479051 KCNK10P57789 538 aa18.79■□□□□ 0.6
VARS-224ENST00000479051 IRX1P78414 480 aaPredicted RBP18.79■□□□□ 0.6
VARS-224ENST00000479051 GAB1Q13480 694 aa18.79■□□□□ 0.6
VARS-224ENST00000479051 HYAL4Q2M3T9 481 aa18.79■□□□□ 0.6
VARS-224ENST00000479051 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.79■□□□□ 0.6
VARS-224ENST00000479051 EIF2S3LQ2VIR3 472 aaKnown RBP18.79■□□□□ 0.6
VARS-224ENST00000479051 WDR53Q7Z5U6 358 aaPredicted RBP18.79■□□□□ 0.6
VARS-224ENST00000479051 CLECL1Q8IZS7 167 aa18.79■□□□□ 0.6
VARS-224ENST00000479051 OR4N2Q8NGD1 307 aa18.79■□□□□ 0.6
VARS-224ENST00000479051 STON2Q8WXE9 905 aa18.79■□□□□ 0.6
VARS-224ENST00000479051 HOXB13Q92826 284 aaPredicted RBP18.79■□□□□ 0.6
VARS-224ENST00000479051 EFHD2Q96C19 240 aaPredicted RBP18.79■□□□□ 0.6
VARS-224ENST00000479051 GIMAP5Q96F15 307 aa18.79■□□□□ 0.6
VARS-224ENST00000479051 OSBPL11Q9BXB4 747 aa18.79■□□□□ 0.6
VARS-224ENST00000479051 SDR39U1Q9NRG7 319 aaPredicted RBP18.79■□□□□ 0.6
VARS-224ENST00000479051 SVILO95425 2214 aa18.79■□□□□ 0.6
VARS-224ENST00000479051 ESPL1Q14674 2120 aa18.79■□□□□ 0.6
VARS-224ENST00000479051 CDC40O60508 579 aaKnown RBP eCLIP18.78■□□□□ 0.6
VARS-224ENST00000479051 GLSO94925 669 aaPredicted RBP18.78■□□□□ 0.6
VARS-224ENST00000479051 NKX2-2O95096 273 aa18.78■□□□□ 0.6
VARS-224ENST00000479051 CPSF4O95639 269 aaKnown RBP18.78■□□□□ 0.6
VARS-224ENST00000479051 IL33O95760 270 aa18.78■□□□□ 0.6
VARS-224ENST00000479051 PGRP06401 933 aa18.78■□□□□ 0.6
VARS-224ENST00000479051 CASP6P55212 293 aa18.78■□□□□ 0.6
VARS-224ENST00000479051 FOXO1Q12778 655 aa18.78■□□□□ 0.6
VARS-224ENST00000479051 LASP1Q14847 261 aaKnown RBP18.78■□□□□ 0.6
VARS-224ENST00000479051 ANKRD46Q86W74 232 aa18.78■□□□□ 0.6
VARS-224ENST00000479051 TRIML2Q8N7C3 387 aa18.78■□□□□ 0.6
VARS-224ENST00000479051 RMND5BQ96G75 393 aaPredicted RBP18.78■□□□□ 0.6
VARS-224ENST00000479051 TMEM41AQ96HV5 264 aa18.78■□□□□ 0.6
VARS-224ENST00000479051 TEX37Q96LM6 180 aa18.78■□□□□ 0.6
VARS-224ENST00000479051 OR52E6Q96RD3 313 aa18.78■□□□□ 0.6
VARS-224ENST00000479051 NODALQ96S42 347 aa18.78■□□□□ 0.6
VARS-224ENST00000479051 STACQ99469 402 aa18.78■□□□□ 0.6
VARS-224ENST00000479051 EBF4Q9BQW3 602 aa18.78■□□□□ 0.6
VARS-224ENST00000479051 ACTRT3Q9BYD9 372 aa18.78■□□□□ 0.6
VARS-224ENST00000479051 PROK2Q9HC23 129 aa18.78■□□□□ 0.6
VARS-224ENST00000479051 BTNL2Q9UIR0 455 aa18.78■□□□□ 0.6
VARS-224ENST00000479051 OSGIN2Q9Y236 505 aa18.78■□□□□ 0.6
VARS-224ENST00000479051 PCDHGB3Q9Y5G1 929 aa18.78■□□□□ 0.6
VARS-224ENST00000479051 EXPH5Q8NEV8 1989 aa18.78■□□□□ 0.6
VARS-224ENST00000479051 RNF103-CHMP3A0A140T963 221 aa18.77■□□□□ 0.6
VARS-224ENST00000479051 TRIM3O75382 744 aaPredicted RBP18.77■□□□□ 0.6
VARS-224ENST00000479051 TROVE2P10155 538 aaKnown RBP eCLIP18.77■□□□□ 0.6
VARS-224ENST00000479051 ACP2P11117 423 aa18.77■□□□□ 0.6
VARS-224ENST00000479051 ELAVL4P26378 380 aaKnown RBP18.77■□□□□ 0.6
VARS-224ENST00000479051 IL12AP29459 219 aa18.77■□□□□ 0.6
VARS-224ENST00000479051 MAP3K8P41279 467 aa18.77■□□□□ 0.6
VARS-224ENST00000479051 RFX3P48380 749 aa18.77■□□□□ 0.6
VARS-224ENST00000479051 CLK3P49761 638 aaKnown RBP18.77■□□□□ 0.6
VARS-224ENST00000479051 BICRALQ6AI39 1079 aa18.77■□□□□ 0.6
VARS-224ENST00000479051 CDC73Q6P1J9 531 aa18.77■□□□□ 0.6
VARS-224ENST00000479051 TMEM251Q8N6I4 163 aa18.77■□□□□ 0.6
VARS-224ENST00000479051 COX18Q8N8Q8 333 aa18.77■□□□□ 0.6
VARS-224ENST00000479051 SLC16A11Q8NCK7 471 aa18.77■□□□□ 0.6
VARS-224ENST00000479051 OR5AK3PQ8NH89 298 aa18.77■□□□□ 0.6
VARS-224ENST00000479051 FBXO30Q8TB52 745 aa18.77■□□□□ 0.6
VARS-224ENST00000479051 ADAMTS15Q8TE58 950 aa18.77■□□□□ 0.6
VARS-224ENST00000479051 PIK3R3Q92569 461 aa18.77■□□□□ 0.6
VARS-224ENST00000479051 DTNBP1Q96EV8 351 aa18.77■□□□□ 0.6
VARS-224ENST00000479051 C16orf58Q96GQ5 468 aa18.77■□□□□ 0.6
VARS-224ENST00000479051 YIPF4Q9BSR8 244 aa18.77■□□□□ 0.6
VARS-224ENST00000479051 ZDHHC11Q9H8X9 412 aa18.77■□□□□ 0.6
VARS-224ENST00000479051 NPHS2Q9NP85 383 aa18.77■□□□□ 0.6
VARS-224ENST00000479051 DUSP22Q9NRW4 184 aa18.77■□□□□ 0.6
VARS-224ENST00000479051 GIN1Q9NXP7 522 aa18.77■□□□□ 0.6
VARS-224ENST00000479051 QPCTLQ9NXS2 382 aa18.77■□□□□ 0.6
VARS-224ENST00000479051 SPENQ96T58 3664 aaKnown RBP18.77■□□□□ 0.6
VARS-224ENST00000479051 EML6Q6ZMW3 1958 aa18.77■□□□□ 0.59
VARS-224ENST00000479051 MYO18BQ8IUG5 2567 aa18.77■□□□□ 0.59
VARS-224ENST00000479051 GCN1Q92616 2671 aaKnown RBP18.77■□□□□ 0.59
VARS-224ENST00000479051 SCN2BO60939 215 aa18.76■□□□□ 0.59
VARS-224ENST00000479051 VIMP08670 466 aaKnown RBP18.76■□□□□ 0.59
VARS-224ENST00000479051 CYP4B1P13584 511 aa18.76■□□□□ 0.59
VARS-224ENST00000479051 UQCRC2P22695 453 aa18.76■□□□□ 0.59
VARS-224ENST00000479051 MAGEA5P43359 124 aa18.76■□□□□ 0.59
VARS-224ENST00000479051 DGKQP52824 942 aa18.76■□□□□ 0.59
VARS-224ENST00000479051 POU6F2P78424 691 aaPredicted RBP18.76■□□□□ 0.59
VARS-224ENST00000479051 SLC10A1Q14973 349 aa18.76■□□□□ 0.59
VARS-224ENST00000479051 CMPK2Q5EBM0 449 aa18.76■□□□□ 0.59
VARS-224ENST00000479051 ARHGAP11AQ6P4F7 1023 aa18.76■□□□□ 0.59
VARS-224ENST00000479051 OR52N2Q8NGI0 321 aa18.76■□□□□ 0.59
VARS-224ENST00000479051 THOC1Q96FV9 657 aaKnown RBP18.76■□□□□ 0.59
VARS-224ENST00000479051 CCDC115Q96NT0 180 aa18.76■□□□□ 0.59
VARS-224ENST00000479051 PANX1Q96RD7 426 aa18.76■□□□□ 0.59
VARS-224ENST00000479051 G6PC3Q9BUM1 346 aa18.76■□□□□ 0.59
VARS-224ENST00000479051 DEFB127Q9H1M4 99 aa18.76■□□□□ 0.59
VARS-224ENST00000479051 PIGUQ9H490 435 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms