RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-208ENST00000479003 ENTPD4Q9Y227 616 aa25.79■■□□□ 1.72
CHKB-208ENST00000479003 PNMA8CA0A1B0GUJ8 204 aa25.78■■□□□ 1.72
CHKB-208ENST00000479003 PRKYO43930 277 aa25.78■■□□□ 1.72
CHKB-208ENST00000479003 TPST2O60704 377 aa25.78■■□□□ 1.72
CHKB-208ENST00000479003 ALPPL2P10696 532 aa25.78■■□□□ 1.72
CHKB-208ENST00000479003 DMWDQ09019 674 aa25.78■■□□□ 1.72
CHKB-208ENST00000479003 ENTPD8Q5MY95 495 aa25.78■■□□□ 1.72
CHKB-208ENST00000479003 SLC48A1Q6P1K1 146 aa25.78■■□□□ 1.72
CHKB-208ENST00000479003 CCDC190Q86UF4 302 aa25.78■■□□□ 1.72
CHKB-208ENST00000479003 POC5Q8NA72 575 aa25.78■■□□□ 1.72
CHKB-208ENST00000479003 NUAK2Q9H093 628 aa25.78■■□□□ 1.72
CHKB-208ENST00000479003 FBXW2Q9UKT8 454 aa25.78■■□□□ 1.72
CHKB-208ENST00000479003 KLHL20Q9Y2M5 609 aa25.78■■□□□ 1.72
CHKB-208ENST00000479003 MDC1Q14676 2089 aaKnown RBP25.78■■□□□ 1.72
CHKB-208ENST00000479003 ARHGEF17Q96PE2 2063 aaPredicted RBP25.78■■□□□ 1.72
CHKB-208ENST00000479003 A6NCN8 305 aa25.78■■□□□ 1.72
CHKB-208ENST00000479003 CD27P26842 260 aa25.78■■□□□ 1.72
CHKB-208ENST00000479003 GTF2E2P29084 291 aaKnown RBP25.78■■□□□ 1.72
CHKB-208ENST00000479003 GIPRP48546 466 aa25.78■■□□□ 1.72
CHKB-208ENST00000479003 SEPHS1P49903 392 aa25.78■■□□□ 1.72
CHKB-208ENST00000479003 CDK5Q00535 292 aa25.78■■□□□ 1.72
CHKB-208ENST00000479003 GINS1Q14691 196 aa25.78■■□□□ 1.72
CHKB-208ENST00000479003 KLHDC7BQ96G42 594 aa25.78■■□□□ 1.72
CHKB-208ENST00000479003 SEC14L4Q9UDX3 406 aa25.78■■□□□ 1.72
CHKB-208ENST00000479003 PCOLCE2Q9UKZ9 415 aa25.78■■□□□ 1.72
CHKB-208ENST00000479003 PCDHGB6Q9Y5F9 930 aa25.78■■□□□ 1.72
CHKB-208ENST00000479003 SNX4O95219 450 aa25.77■■□□□ 1.72
CHKB-208ENST00000479003 CELA2BP08218 269 aaPredicted RBP25.77■■□□□ 1.72
CHKB-208ENST00000479003 F3P13726 295 aa25.77■■□□□ 1.72
CHKB-208ENST00000479003 BUD31P41223 144 aaPredicted RBP25.77■■□□□ 1.72
CHKB-208ENST00000479003 SOX3P41225 446 aa25.77■■□□□ 1.72
CHKB-208ENST00000479003 TSFMP43897 325 aaKnown RBP25.77■■□□□ 1.72
CHKB-208ENST00000479003 ZXDAP98168 799 aa25.77■■□□□ 1.72
CHKB-208ENST00000479003 C18orf63Q68DL7 685 aa25.77■■□□□ 1.72
CHKB-208ENST00000479003 TMEM107Q6UX40 140 aa25.77■■□□□ 1.72
CHKB-208ENST00000479003 HMGN2P46Q86SG4 172 aa25.77■■□□□ 1.72
CHKB-208ENST00000479003 MFSD9Q8NBP5 474 aa25.77■■□□□ 1.72
CHKB-208ENST00000479003 CADM4Q8NFZ8 388 aa25.77■■□□□ 1.72
CHKB-208ENST00000479003 FGF11Q92914 225 aa25.77■■□□□ 1.72
CHKB-208ENST00000479003 C16orf58Q96GQ5 468 aa25.77■■□□□ 1.72
CHKB-208ENST00000479003 GPA33Q99795 319 aa25.77■■□□□ 1.72
CHKB-208ENST00000479003 SPHK1Q9NYA1 384 aa25.77■■□□□ 1.72
CHKB-208ENST00000479003 ZNF624Q9P2J8 865 aaPredicted RBP25.77■■□□□ 1.72
CHKB-208ENST00000479003 ANKMY1Q9P2S6 941 aa25.77■■□□□ 1.72
CHKB-208ENST00000479003 CACNA1IQ9P0X4 2223 aa25.77■■□□□ 1.72
CHKB-208ENST00000479003 TRBV23OR9-2A0A075B6M9 112 aa25.76■■□□□ 1.71
CHKB-208ENST00000479003 TLX2O43763 284 aaPredicted RBP25.76■■□□□ 1.71
CHKB-208ENST00000479003 PTTG1O95997 202 aa25.76■■□□□ 1.71
CHKB-208ENST00000479003 TNFP01375 233 aa25.76■■□□□ 1.71
CHKB-208ENST00000479003 WNT1P04628 370 aa25.76■■□□□ 1.71
CHKB-208ENST00000479003 HBQ1P09105 142 aa25.76■■□□□ 1.71
CHKB-208ENST00000479003 CSNK2A2P19784 350 aaPredicted RBP25.76■■□□□ 1.71
CHKB-208ENST00000479003 BCKDHBP21953 392 aa25.76■■□□□ 1.71
CHKB-208ENST00000479003 CERS1P27544 350 aa25.76■■□□□ 1.71
CHKB-208ENST00000479003 EIF2B2P49770 351 aaKnown RBP25.76■■□□□ 1.71
CHKB-208ENST00000479003 EFNB1P98172 346 aa25.76■■□□□ 1.71
CHKB-208ENST00000479003 ILF3Q12906 894 aaKnown RBP eCLIP25.76■■□□□ 1.71
CHKB-208ENST00000479003 GPAT3Q53EU6 434 aa25.76■■□□□ 1.71
CHKB-208ENST00000479003 CACTIN-AS1Q8N1I8 211 aa25.76■■□□□ 1.71
CHKB-208ENST00000479003 SRFBP1Q8NEF9 429 aaKnown RBP25.76■■□□□ 1.71
CHKB-208ENST00000479003 JPH3Q8WXH2 748 aaPredicted RBP25.76■■□□□ 1.71
CHKB-208ENST00000479003 NECAB3Q96P71 396 aaPredicted RBP25.76■■□□□ 1.71
CHKB-208ENST00000479003 CNPPD1Q9BV87 410 aa25.76■■□□□ 1.71
CHKB-208ENST00000479003 ASPNQ9BXN1 380 aa25.76■■□□□ 1.71
CHKB-208ENST00000479003 KCNE3Q9Y6H6 103 aa25.76■■□□□ 1.71
CHKB-208ENST00000479003 EMC8O43402 210 aa25.76■■□□□ 1.71
CHKB-208ENST00000479003 GSTM3P21266 225 aa25.76■■□□□ 1.71
CHKB-208ENST00000479003 PRR5P85299 388 aa25.76■■□□□ 1.71
CHKB-208ENST00000479003 MLLT11Q13015 90 aaPredicted RBP25.76■■□□□ 1.71
CHKB-208ENST00000479003 SPANXN2Q5MJ10 180 aa25.76■■□□□ 1.71
CHKB-208ENST00000479003 ACSM5Q6NUN0 579 aa25.76■■□□□ 1.71
CHKB-208ENST00000479003 HSPA12BQ96MM6 686 aa25.76■■□□□ 1.71
CHKB-208ENST00000479003 SYNPO2LQ9H987 977 aa25.76■■□□□ 1.71
CHKB-208ENST00000479003 CRNNQ9UBG3 495 aaPredicted RBP25.76■■□□□ 1.71
CHKB-208ENST00000479003 APOBEC3BQ9UH17 382 aaKnown RBP25.76■■□□□ 1.71
CHKB-208ENST00000479003 DIMT1Q9UNQ2 313 aaKnown RBP25.76■■□□□ 1.71
CHKB-208ENST00000479003 SYT5O00445 386 aa25.75■■□□□ 1.71
CHKB-208ENST00000479003 C8orf89P0DMQ9 161 aa25.75■■□□□ 1.71
CHKB-208ENST00000479003 PSMA1P25786 263 aaKnown RBP25.75■■□□□ 1.71
CHKB-208ENST00000479003 CRYBB2P43320 205 aa25.75■■□□□ 1.71
CHKB-208ENST00000479003 LSM11P83369 360 aaKnown RBP eCLIP25.75■■□□□ 1.712e-6■□□□□ 10
CHKB-208ENST00000479003 CEBPEQ15744 281 aa25.75■■□□□ 1.71
CHKB-208ENST00000479003 SYT14P1Q58G82 188 aa25.75■■□□□ 1.71
CHKB-208ENST00000479003 HTRA1Q92743 480 aa25.75■■□□□ 1.71
CHKB-208ENST00000479003 OR7D2Q96RA2 312 aa25.75■■□□□ 1.71
CHKB-208ENST00000479003 POLR2J2Q9GZM3 115 aaKnown RBP25.75■■□□□ 1.71
CHKB-208ENST00000479003 EXOSC4Q9NPD3 245 aaKnown RBP25.75■■□□□ 1.71
CHKB-208ENST00000479003 NDUFB11Q9NX14 153 aa25.75■■□□□ 1.71
CHKB-208ENST00000479003 STUB1Q9UNE7 303 aa25.75■■□□□ 1.71
CHKB-208ENST00000479003 HEBP2Q9Y5Z4 205 aa25.75■■□□□ 1.71
CHKB-208ENST00000479003 MN1Q10571 1320 aaPredicted RBP25.75■■□□□ 1.71
CHKB-208ENST00000479003 LAMA1P25391 3075 aa25.75■■□□□ 1.71
CHKB-208ENST00000479003 LOC110117498-PIK3R3F6TDL0 507 aa25.75■■□□□ 1.71
CHKB-208ENST00000479003 KDM1AO60341 852 aa25.75■■□□□ 1.71
CHKB-208ENST00000479003 ALOX12P18054 663 aa25.75■■□□□ 1.71
CHKB-208ENST00000479003 CMPK1P30085 196 aa25.75■■□□□ 1.71
CHKB-208ENST00000479003 ZNF425Q6IV72 752 aa25.75■■□□□ 1.71
CHKB-208ENST00000479003 GPBAR1Q8TDU6 330 aa25.75■■□□□ 1.71
CHKB-208ENST00000479003 PIK3R3Q92569 461 aa25.75■■□□□ 1.71
CHKB-208ENST00000479003 SPACA7Q96KW9 195 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms